Wietkamp, Stephan; Tillmann, Urban; Krock, Bernd (2021): Cell count time series of Azadinium spinosum, Azadinium poporum and Amphidoma languida at Cuxhaven, Helgoland, Sylt, Wilhelmshaven and Scapa Flow between 2015 and 2019 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.931809
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Abstract:
The data represent species counts (cells L-1) of the three AZA-producing dinoflagellate species Azadinium spinosum, Az. poporum and Amphidoma languida (all members of the taxonomic family Amphidomataceae) of water samples taken during in total six different field expeditions on several research vessels (RV Heincke, RV Uthörn, RV Polarstern) and on in total five stationary sampling stations (Scapa Flow/Scotland, Cuxhaven/Germany, Helgoland/Germany, Wilhelmshaven/Germany, Sylt/Germany) between 2015 and 2019. The water samples have been taken using Niskin bottles (on research vessels attached to a CTD). After DNA extraction, the species cell numbers have been calculated by quantitative PCR (qPCR) analysis using respective standard curves. These samples gained from different geographical areas in the eastern North Atlantic have been analyzed as part of the RIPAZA Project (funded by the German BMBF; in cooperation with the Third Institute of Oceanography, Xiamen/China) and the results are presented and discussed in the doctoral thesis of Stephan Wietkamp (Suppl.Tab.S6, Suppl.Tab.S7). Aim of the project and especially of this data set was to provide first reference data on the biogeography (geographical distribution and seasonality) of toxigenic Amphidomataceae in the eastern North Atlantic.
Related to:
Wietkamp, Stephan (2020): Biogeography, diversity and risk potential of toxigenic Amphidomataceae (Dinophyceae) in the North Sea and adjacent areas. Universität Bremen, https://doi.org/10.26092/elib/350
Coverage:
Median Latitude: 55.207882 * Median Longitude: 6.352820 * South-bound Latitude: 53.513000 * West-bound Longitude: -2.901000 * North-bound Latitude: 58.885000 * East-bound Longitude: 8.705000
Date/Time Start: 2016-03-10T00:00:00 * Date/Time End: 2019-12-20T00:00:00
Event(s):
Comment:
Cell number calculation based on mean CT value of three technical replicates
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Location | Location | Wietkamp, Stephan | |||
| 2 | LATITUDE | Latitude | Wietkamp, Stephan | Geocode | ||
| 3 | LONGITUDE | Longitude | Wietkamp, Stephan | Geocode | ||
| 4 | DATE/TIME | Date/Time | Wietkamp, Stephan | Geocode | ||
| 5 | Azadinium spinosum | A. spinosum | #/l | Wietkamp, Stephan | Quantitative real-time PCR (qPCR) (QPCR) | |
| 6 | Azadinium poporum | A. poporum | #/l | Wietkamp, Stephan | Quantitative real-time PCR (qPCR) (QPCR) | |
| 7 | Amphidoma languida | A. languida | #/l | Wietkamp, Stephan | Quantitative real-time PCR (qPCR) (QPCR) |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
980 data points