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Oron, Shai; Evans, David; Abramovich, Sigal; Almogi-Labin, Ahuva; Erez, Jonathan (2020): Seawater carbonate chemistry and calcification, respiration, and photosynthesis of the widespread diatom‐bearing LBF Operculina ammonoides [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.929866

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Abstract:
Larger benthic foraminifera (LBF) are unicellular eukaryotic calcifying organisms and an important component of tropical and subtropical modern and ancient oceanic ecosystems. They are major calcium carbonate producers and important contributors to primary production due to the photosynthetic activity of their symbiotic algae. Studies investigating the response of LBF to seawater carbonate chemistry changes are therefore essential for understanding the impact of climate changes and ocean acidification (OA) on shallow marine ecosystems. In this study, calcification, respiration, and photosynthesis of the widespread diatom‐bearing LBF Operculina ammonoides were measured in laboratory experiments that included manipulation of carbonate chemistry parameters. pH was altered while keeping dissolved inorganic carbon (DIC) constant, and DIC was altered while keeping pH constant. The results show clear vulnerability of O. ammonoides to low pH and CO32− under constant DIC conditions, and no increased photosynthesis or calcification under high DIC concentrations. Our results call into question previous hypotheses, suggesting that mechanisms such as the degree of cellular control on calcification site pH/DIC and/or enhanced symbiont photosynthesis in response to OA may render the hyaline (perforate and calcitic‐radial) LBF to be less responsive to OA than porcelaneous LBF. In addition, manipulating DIC did not affect calcification when pH was close to present seawater levels in a model encompassing the total population size range. In contrast, larger individuals (>1,200 μm, >1 mg) were sensitive to changes in DIC, a phenomenon we attribute to their physiological requirement to concentrate large quantities of DIC for their calcification process.
Keyword(s):
Benthos; Bottles or small containers/Aquaria (<20 L); Calcification/Dissolution; Chromista; Coast and continental shelf; Foraminifera; Heterotrophic prokaryotes; Laboratory experiment; Operculina ammonoides; Primary production/Photosynthesis; Red Sea; Respiration; Single species; Temperate
Supplement to:
Oron, Shai; Evans, David; Abramovich, Sigal; Almogi-Labin, Ahuva; Erez, Jonathan (2020): Differential Sensitivity of a Symbiont‐Bearing Foraminifer to Seawater Carbonate Chemistry in a Decoupled DIC‐pH Experiment. Journal of Geophysical Research: Biogeosciences, 125(9), https://doi.org/10.1029/2020JG005726
Original version:
Oron, Shai; Evans, David; Abramovich, Sigal; Almogi-Labin, Ahuva; Erez, Jonathan: Seawater carbonate chemistry in a decoupled DIC-pH laboratory experiment. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.913506
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2021-03-30.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeOron, Shai
2SpeciesSpeciesOron, Shai
3Registration number of speciesReg spec noOron, Shai
4Uniform resource locator/link to referenceURL refOron, Shai
5ExperimentExpOron, Shai
6IdentificationIDOron, Shai
7SizeSizeOron, Shai
8Time in hoursTimehOron, Shai
9IndividualsInd#Oron, Shaiforams
10MassMassmgOron, Shaiforam
11MassMassmgOron, Shaitotal
12MassMassmgOron, Shaicalculated, after SW
13Alkalinity, totalATµmol/kgOron, Shaistart
14pHpHOron, Shaistart, NBS scale
15Carbon, inorganic, dissolvedDICµmol/kgOron, ShaiCalculated using CO2SYSstart
16Bicarbonate ion[HCO3]-µmol/kgOron, ShaiCalculated using CO2SYSstart
17Carbonate ion[CO3]2-µmol/kgOron, ShaiCalculated using CO2SYSstart
18Carbon dioxideCO2µmol/kgOron, ShaiCalculated using CO2SYSstart
19Hydroxide ionOH-µmol/kgOron, ShaiCalculated using CO2SYSstart
20Calcite saturation stateOmega CalOron, ShaiCalculated using CO2SYSstart
21Alkalinity, totalATµmol/kgOron, Shaiend
22pHpHOron, Shaiend, NBS scale
23Carbon, inorganic, dissolvedDICµmol/kgOron, ShaiCalculated using CO2SYSend
24Bicarbonate ion[HCO3]-µmol/kgOron, ShaiCalculated using CO2SYSend
25Carbonate ion[CO3]2-µmol/kgOron, ShaiCalculated using CO2SYSend
26Carbon dioxideCO2µmol/kgOron, ShaiCalculated using CO2SYSend
27Calcite saturation stateOmega CalOron, ShaiCalculated using CO2SYSend
28Calcification rate of calcium carbonateCalc rate CaCO3µmol/g/dayOron, ShaiSW
29Photosynthesis ratePhotosynthµmol/mg/dayOron, Shai
30IdentificationIDOron, Shai
31TreatmentTreatOron, Shai
32TypeTypeOron, Shai
33Experiment durationExp durationhOron, Shai
34Calcium carbonate, massCaCO3mgOron, ShaiAdd/foram
35MassMassmgOron, Shaicalculated, after SW
36MassMassmgOron, Shaicalculated, after exp
37Calcification rate of calcium carbonateCalc rate CaCO3µmol/g/dayOron, Shaiexp
38RatioRatioOron, Shairelative calcification rate
39Oxygen evolutionO2 evnmol/mg/hOron, Shai
40Temperature, waterTemp°COron, Shai
41SalinitySalOron, Shai
42Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
43pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
44Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
46Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
47Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
48Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
49Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
50Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
51Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
3889 data points

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