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Laws, Edward A; McClellan, S Alex (2020): Seawater carbonate chemistry and growth and physiology of the marine diatom Thalassiosira pseudonana (Coscinodiscophyceae) [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.929551

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Abstract:
The marine diatom Thalassiosira pseudonana was grown in continuous culture systems to study the interactive effects of temperature, irradiance, nutrient limitation, and the partial pressure of CO2 (pCO2) on its growth and physiological characteristics. The cells were able to grow at all combinations of low and high irradiance (50 and 300 μmol photons/m**2/ s, respectively, of visible light), low and high pCO2 (400 and 1,000 μatm, respectively), nutrient limitation (nitrate‐limited and nutrient‐replete conditions), and temperatures of 10–32°C. Under nutrient‐replete conditions, there was no adverse effect of high pCO2 on growth rates at temperatures of 10–25°C. The response of the cells to high pCO2 was similar at low and high irradiance. At supraoptimal temperatures of 30°C or higher, high pCO2 depressed growth rates at both low and high irradiance. Under nitrate‐limited conditions, cells were grown at 38 ± 2.4% of their nutrient‐saturated rates at the same temperature, irradiance, and pCO2. Dark respiration rates consistently removed a higher percentage of production under nitrate‐limited versus nutrient‐replete conditions. The percentages of production lost to dark respiration were positively correlated with temperature under nitrate‐limited conditions, but there was no analogous correlation under nutrient‐replete conditions. The results suggest that warmer temperatures and associated more intense thermal stratification of ocean surface waters could lower net photosynthetic rates if the stratification leads to a reduction in the relative growth rates of marine phytoplankton, and at truly supraoptimal temperatures there would likely be a synergistic interaction between the stresses from temperature and high pCO2 (lower pH).
Keyword(s):
Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chromista; Growth/Morphology; Laboratory experiment; Laboratory strains; Light; Macro-nutrients; Not applicable; Ochrophyta; Pelagos; Phytoplankton; Primary production/Photosynthesis; Respiration; Single species; Temperature; Thalassiosira pseudonana
Supplement to:
Laws, Edward A; McClellan, S Alex (2020): Interactive effects of CO2, temperature, irradiance, and nutrient limitation on the growth and physiology of the marine diatom Thalassiosira pseudonana (Coscinodiscophyceae). Journal of Phycology, 56(6), 1614-1624, https://doi.org/10.1111/jpy.13048
Original version:
Laws, Edward A (2020): Thalassiosira pseudonana CCMP1335 in nitrate-limited and nutrient-replete cultures. Biological & Chemical Oceanography Data Management Office, https://www.bco-dmo.org/dataset/779368
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
Coverage:
Date/Time Start: 2012-01-24T00:00:00 * Date/Time End: 2014-11-19T00:00:00
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2021-03-23.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TypeTypeLaws, Edward Astudy
SpeciesSpeciesLaws, Edward A
Registration number of speciesReg spec noLaws, Edward A
Uniform resource locator/link to referenceURL refLaws, Edward AWoRMS Aphia ID
DATE/TIMEDate/TimeLaws, Edward AGeocode
Temperature, waterTemp°CLaws, Edward A
TreatmentTreatLaws, Edward Alimiting factor
IrradianceEµmol/m2/sLaws, Edward A
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmLaws, Edward A
10 TreatmentTreatLaws, Edward AIrradiance-CO2 combination: H = high; L = low
11 Growth rateµ1/dayLaws, Edward A
12 Growth rate, standard deviationµ std dev±Laws, Edward A
13 RatioRatioLaws, Edward Athe nutrient-limited growth rate to the nutrient-replete growth rate under otherwise identical conditions
14 Productivity index (carbon/chlorophyll a)PIg/g/hLaws, Edward A
15 RespirationResp1/dayLaws, Edward Adark
16 RatioRatioLaws, Edward Adark respiration/growth rate
17 Maximum quantum yield of photosystem IIFv/FmLaws, Edward A
18 Maximum photosynthetic rate (carbon/chlorophyll a)Pmaxg/g/hLaws, Edward Aat lights on
19 Maximum photosynthetic rate (carbon/chlorophyll a)Pmaxg/g/hLaws, Edward Aat midday
20 Maximum photosynthetic rate (carbon/chlorophyll a)Pmaxg/g/hLaws, Edward Aat lights off
21 Maximum photosynthetic rate (carbon/chlorophyll a)Pmaxg/g/hLaws, Edward Amean
22 Maximum photosynthetic rate (carbon/chlorophyll a), standard errorPmax std e±Laws, Edward A
23 Initial slope of the photosynthesis-irradiance curvealpha(mg C /mg Chl a/h)/(µE/m2/s)Laws, Edward Aat lights on
24 Initial slope of the photosynthesis-irradiance curvealpha(mg C /mg Chl a/h)/(µE/m2/s)Laws, Edward Aat midday
25 Initial slope of the photosynthesis-irradiance curvealpha(mg C /mg Chl a/h)/(µE/m2/s)Laws, Edward Aat lights off
26 Initial slope of the photosynthesis-irradiance curvealpha(mg C /mg Chl a/h)/(µE/m2/s)Laws, Edward Amean
27 Initial slope of the photosynthesis-irradiance curve, standard erroralpha std e±Laws, Edward A
28 Carbon/Nitrogen ratioC/NLaws, Edward A
29 Carbon/Chlorophyll a ratioC/Chl aLaws, Edward A
30 Nitrogen/chlorophyll a ratioN/Chl aLaws, Edward A
31 RatioRatioLaws, Edward Amean photosynthesis to maximum photosynthetic production
32 SalinitySalLaws, Edward A
33 Alkalinity, totalATµmol/kgLaws, Edward A
34 pHpHLaws, Edward Atotal scale
35 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
38 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
43 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1763 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Type
(study)

Species

Reg spec no

URL ref
(WoRMS Aphia ID)

Date/Time

Temp [°C]

Treat
(limiting factor)

E [µmol/m2/s]

pCO2water_SST_wet [µatm]
10 
Treat
(Irradiance-CO2 combination: H...)
11 
µ [1/day]
12 
µ std dev [±]
13 
Ratio
(the nutrient-limited growth r...)
14 
PI [g/g/h]
15 
Resp [1/day]
(dark)
16 
Ratio
(dark respiration/growth rate)
17 
Fv/Fm
18 
Pmax [g/g/h]
(at lights on)
19 
Pmax [g/g/h]
(at midday)
20 
Pmax [g/g/h]
(at lights off)
21 
Pmax [g/g/h]
(mean)
22 
Pmax std e [±]
23 
alpha [(mg C /mg Chl a/h)/(µE/m2/s)]
(at lights on)
24 
alpha [(mg C /mg Chl a/h)/(µE/m2/s)]
(at midday)
25 
alpha [(mg C /mg Chl a/h)/(µE/m2/s)]
(at lights off)
26 
alpha [(mg C /mg Chl a/h)/(µE/m2/s)]
(mean)
27 
alpha std e [±]
28 
C/N
29 
C/Chl a
30 
N/Chl a
31 
Ratio
(mean photosynthesis to maximu...)
32 
Sal
33 
AT [µmol/kg]
34 
pH
(total scale)
35 
CSC flag
36 
CO2 [µmol/kg]
37 
fCO2water_SST_wet [µatm]
38 
pCO2water_SST_wet [µatm]
39 
[HCO3]- [µmol/kg]
40 
[CO3]2- [µmol/kg]
41 
DIC [µmol/kg]
42 
Omega Arg
43 
Omega Cal
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2013-04-20T00:0010nitrate300400HL0.1680.2003.490.1010.6010.5403.795.914.914.870.611.080.720.470.760.1811.60197.0016.980.723523658.058817.36395.65397.182015.17140.902173.442.143.36
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2013-10-18T00:0010nitrate50400LL0.3400.5071.920.0890.2620.6103.936.903.284.701.110.991.880.901.260.319.7672.107.390.413523658.058817.36395.65397.182015.17140.902173.442.143.36
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-10-17T00:0010nitrate3001100HH0.4200.5124.700.1960.4670.64010.4016.0010.8712.401.790.870.990.900.920.0410.40133.0012.790.38352365
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-09-12T00:0010nitrate501100LH0.2300.2992.040.1290.5610.6204.355.413.774.510.480.930.890.920.920.0110.44101.209.690.45352365
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2013-03-27T00:0015nitrate300400HL0.4000.2764.180.2200.5380.5906.9011.106.338.111.500.911.290.881.030.139.31124.0013.320.523523658.062814.74393.50394.931952.26167.322134.312.563.99
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2013-10-02T00:0015nitrate50400LL0.4750.5051.890.1270.2670.6003.773.853.093.570.240.950.991.071.000.039.9453.905.420.533523658.062814.74393.50394.931952.26167.322134.312.563.99
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-11-07T00:0015nitrate3001000HH0.6900.4765.830.3050.4420.64010.0818.2610.4112.922.670.931.351.091.120.1310.10101.5010.050.453523657.710836.71979.99983.542161.7882.382280.871.261.96
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-05-20T00:0015nitrate501000LH0.3500.3502.440.2470.7060.6103.434.032.753.400.370.820.930.880.880.039.9280.908.160.723523657.710836.71979.99983.542161.7882.382280.871.261.96
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2012-01-24T00:0020nitrate300400HL0.8500.5007.370.4000.47112.5018.2710.6010.102.310.991.120.901.000.067.61106.0013.930.733523658.060812.80394.96396.301887.26194.662094.723.034.66
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2012-11-22T00:0020nitrate50400LL0.4000.4041.370.2700.6750.6302.252.632.072.320.170.660.720.640.670.028.7139.904.580.593523658.060812.80394.96396.301887.26194.662094.723.034.66
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-11-19T00:0020nitrate3001000HH0.7000.3455.340.4720.6740.62010.0617.708.5912.122.820.881.021.241.050.1110.8084.207.800.443523657.716831.78980.53983.872121.9999.132252.891.542.37
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-04-11T00:0020nitrate501000LH0.3700.3062.590.2700.7300.5802.914.383.063.450.470.901.150.961.000.0811.8075.306.380.753523657.716831.78980.53983.872121.9999.132252.891.542.37
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2012-03-17T00:0025nitrate300400HL1.0600.5177.430.5200.49110.608.985.988.521.351.431.461.131.340.1112.1088.107.280.873523658.053811.34399.25400.531820.90222.502054.743.535.36
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2012-09-14T00:0025nitrate50400LL0.2900.2481.960.2700.9310.6002.822.241.522.190.381.171.210.801.060.1312.2067.705.550.893523658.053811.34399.25400.531820.90222.502054.743.535.36
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-11-09T00:0025nitrate3001000HH0.9500.4086.700.5570.5860.60010.9012.208.2710.461.161.031.111.011.050.0311.0080.107.280.643523657.717828.06988.19991.352079.12117.202224.381.862.82
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-03-13T00:0025nitrate501000LH0.3600.3602.310.3500.9720.5803.523.522.883.310.210.840.970.840.880.0412.6061.904.910.703523657.717828.06988.19991.352079.12117.202224.381.862.82
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2012-04-20T00:0030nitrate300400HL1.0000.4266.220.1500.1495.959.774.806.841.501.061.470.971.160.1511.1078.507.070.913523658.042810.21405.60406.821753.57250.492014.274.086.09
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2013-01-23T00:0030nitrate50400LL0.2140.1841.330.2901.3550.6302.653.963.203.270.380.700.930.860.830.079.4649.805.260.413523658.042810.21405.60406.821753.57250.492014.274.086.09
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-10-17T00:0030nitrate3001000HH0.8100.3866.020.7320.9040.59012.4010.867.5010.251.450.960.930.910.930.019.6776.307.890.593523657.713825.261003.481006.512033.93136.212195.402.223.31
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-02-05T00:0030nitrate501000LH0.3200.4321.860.4901.5310.6003.103.672.103.000.460.770.980.740.830.079.9248.504.890.633523657.713825.261003.481006.512033.93136.212195.402.223.31
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2012-05-31T00:0032nitrate300400HL0.1300.1304.550.1501.1540.5003.403.4013.50222.001.343523658.03789.82408.17409.371726.07261.801997.694.316.40
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2013-06-21T00:005nut replete300400HL0.4150.890.5306.529.236.427.390.925.8957.000.12352365
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2013-12-10T00:005nut replete3001000HH0.3504.190.0730.59011.4015.4019.6015.476.02279.000.27352365
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laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2013-11-01T00:0010nut replete3001000HH0.8202.670.0640.0780.6209.7514.0510.5011.431.331.111.201.281.200.054.8059.9012.480.233523657.700843.17983.87987.682197.5667.382308.111.021.61
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-09-08T00:0010nut replete601000LH0.7702.040.1830.2380.6303.223.502.803.170.200.910.940.900.920.015.2932.706.180.643523657.700843.17983.87987.682197.5667.382308.111.021.61
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2013-03-19T00:0015nut replete300400HL1.4503.270.3500.2410.62020.8013.005.8313.214.321.291.261.091.210.065.7241.007.170.253523658.062814.74393.50394.931952.26167.322134.312.563.99
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2013-09-19T00:0015nut replete60400LL0.9402.470.3250.3460.6003.693.913.153.580.230.910.991.221.040.097.3832.904.460.693523658.062814.74393.50394.931952.26167.322134.312.563.99
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2013-09-16T00:0015nut replete3001000HH1.4504.650.1650.1140.5709.6910.8413.9511.491.271.051.102.371.510.437.4561.808.300.403523657.710836.71979.99983.542161.7882.382280.871.261.96
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-07-21T00:0015nut replete501000LH1.0002.100.3800.3800.6502.183.013.052.750.280.840.871.100.940.085.2228.805.520.763523657.710836.71979.99983.542161.7882.382280.871.261.96
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2012-03-27T00:0020nut replete300400HL1.7005.140.2700.1590.62016.7011.705.3511.253.280.971.070.981.010.037.8144.005.630.463523658.060812.80394.96396.301887.26194.662094.723.034.66
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2012-11-28T00:0020nut replete60400LL0.9901.390.2100.2120.6503.584.261.873.240.710.880.930.630.810.095.6120.603.670.433523658.060812.80394.96396.301887.26194.662094.723.034.66
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-01-31T00:0020nut replete3001000HH2.0306.840.3260.1610.6357.3313.167.209.231.970.780.981.110.960.106.2143.707.040.743523657.716831.78980.53983.872121.9999.132252.891.542.37
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-05-04T00:0020nut replete601000LH1.2102.650.3460.2860.6603.265.633.174.020.810.890.991.060.980.055.0023.804.760.663523657.716831.78980.53983.872121.9999.132252.891.542.37
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2012-08-11T00:0025nut replete300400HL2.0506.010.5180.2530.6207.3113.166.358.942.130.891.311.161.120.126.7037.405.580.673523658.053811.34399.25400.531820.90222.502054.743.535.36
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2013-10-29T00:0025nut replete50400LL1.1702.040.3500.2990.6204.344.723.174.080.470.981.051.291.100.098.4029.503.510.503523658.053811.34399.25400.531820.90222.502054.743.535.36
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-03-06T00:0025nut replete3001000HH2.3307.530.4770.2050.6409.6710.507.249.140.981.021.061.391.150.126.9041.606.030.823523657.717828.06988.19991.352079.12117.202224.381.862.82
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2013-12-05T00:0025nut replete501000LH1.0001.890.3590.3590.6803.104.342.263.230.600.460.520.890.620.135.3423.204.340.583523657.717828.06988.19991.352079.12117.202224.381.862.82
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2012-04-23T00:0030nut replete300400HL2.3500.1803.600.4700.2000.6103.767.362.414.511.480.620.720.520.620.066.5729.004.410.803523658.042810.21405.60406.821753.57250.492014.274.086.09
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2013-11-07T00:0030nut replete50400LL1.1601.920.2130.1840.6603.043.922.473.140.420.931.011.000.980.036.8721.053.060.613523658.042810.21405.60406.821753.57250.492014.274.086.09
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2014-04-03T00:0030nut replete3001000HH2.1000.1006.320.6570.3130.6707.786.019.937.911.131.310.952.051.440.327.4949.406.600.803523657.713825.261003.481006.512033.93136.212195.402.223.31
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2013-11-19T00:0030nut replete501000LH0.7402.010.1100.1490.6403.653.832.563.350.400.810.580.550.650.086.5627.104.130.603523657.713825.261003.481006.512033.93136.212195.402.223.31
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2012-06-14T00:0031nut replete300400HL2.3000.0604.100.82026.2011.203.5913.667.5339.000.30352365
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2012-06-14T00:0031nut replete3001000HH2.1300.120352365
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2012-07-19T00:0032nut replete300400HL0.9850.0903.650.41013.4013.4011.5091.000.273523658.03789.82408.17409.371726.07261.801997.694.316.40
laboratoryThalassiosira pseudonana (phytoplankton)148934marinespecies.org2012-07-19T00:0032nut replete3001000HH0.5800.1243523657.711824.291009.231012.202014.71144.252183.242.383.52