Not logged in
PANGAEA.
Data Publisher for Earth & Environmental Science

Zhang, Di; Xu, Juntian; Bao, Menglin; Beer, Sven; Yan, Dong; Beardall, John; Gao, Kunshan (2020): Seawater carbonate chemistry and UVR-induced inhibition of photosynthetic light reactions and growth in an intertidal red macroalga [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.927308

Always quote citation above when using data! You can download the citation in several formats below.

RIS CitationBibTeX CitationShow MapGoogle Earth

Abstract:
The commercially important red macroalga Pyropia (formerly Porphyra) yezoensis is, in its natural intertidal environment, subjected to high levels of both photosynthetically active and ultraviolet radiation (PAR and UVR, respectively). In the present work, we investigated the effects of a plausibly increased global CO2 concentration on quantum yields of photosystems II (PSII) and I (PSI), as well as photosynthetic and growth rates of P. yezoensis grown under natural solar irradiance regimes with or without the presence of UV-A and/or UV-B. Our results showed that the high-CO2 treatment (1000 μbar, which also caused a drop of 0.3 pH units in the seawater) significantly increased both CO2 assimilation rates (by 35%) and growth (by 18%), as compared with ambient air of 400 μbar CO2. The inhibition of growth by UV-A (by 26%) was reduced to 15% by high-CO2 concentration, while the inhibition by UV-B remained at ~6% under both CO2 concentrations. Homologous results were also found for the maximal relative photosynthetic electron transport rates (rETRmax), the maximum quantum yield of PSII (Fv/Fm), as well as the midday decrease in effective quantum yield of PSII (YII) and concomitant increased non-photochemical quenching (NPQ). A two-way ANOVA analysis showed an interaction between CO2 concentration and irradiance quality, reflecting that UVR-induced inhibition of both growth and YII were alleviated under the high-CO2 treatment. Contrary to PSII, the effective quantum yield of PSI (YI) showed higher values under high-CO2 condition, and was not significantly affected by the presence of UVR, indicating that it was well protected from this radiation. Both the elevated CO2 concentration and presence of UVR significantly induced UV-absorbing compounds. These results suggest that future increasing CO2 conditions will be beneficial for photosynthesis and growth of P. yezoensis even if UVR should remain at high levels.
Keyword(s):
Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Growth/Morphology; Laboratory experiment; Light; Macroalgae; North Pacific; Plantae; Primary production/Photosynthesis; Pyropia yezoensis; Rhodophyta; Single species; Temperate
Supplement to:
Zhang, Di; Xu, Juntian; Bao, Menglin; Beer, Sven; Yan, Dong; Beardall, John; Gao, Kunshan (2020): Elevated CO2 concentration alleviates UVR-induced inhibition of photosynthetic light reactions and growth in an intertidal red macroalga. Journal of Photochemistry and Photobiology B-Biology, 213, 112074, https://doi.org/10.1016/j.jphotobiol.2020.112074
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2020): seacarb: seawater carbonate chemistry with R. R package version 3.2.14. https://CRAN.R-project.org/package=seacarb
Coverage:
Latitude: 34.908600 * Longitude: 119.532500
Event(s):
Gaogong_Island * Latitude: 34.908600 * Longitude: 119.532500 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2021-01-25.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TypeTypeGao, Kunshanstudy
SpeciesSpeciesGao, Kunshan
Registration number of speciesReg spec noGao, Kunshan
Uniform resource locator/link to referenceURL refGao, KunshanWoRMS Aphia ID
TreatmentTreatGao, Kunshan
Growth rateµ%/dayGao, Kunshan
Growth rate, standard deviationµ std dev±Gao, Kunshan
Carbon dioxide assimilation rate, per areaCO2 assim r areamg C/m2/dayGao, Kunshan
Carbon dioxide assimilation rate, standard deviationCO2 assim r std dev±Gao, Kunshan
10 Maximal electron transport rate, relativerETR maxGao, Kunshan
11 Maximal electron transport rate, relative, standard deviationrETR max std dev±Gao, Kunshan
12 Maximum photochemical quantum yield of photosystem IIFv/FmGao, Kunshan
13 Maximum photochemical quantum yield of photosystem II, standard deviationFv/Fm std dev±Gao, Kunshan
14 Effective quantum yieldYGao, Kunshanphotosystem II
15 Effective quantum yield, standard deviationY std dev±Gao, Kunshanphotosystem II
16 Non photochemical quenchingNPQGao, Kunshan
17 Non photochemical quenching, standard deviationNPQ std dev±Gao, Kunshan
18 Effective quantum yieldYGao, Kunshanphotosystem I
19 Effective quantum yield, standard deviationY std dev±Gao, Kunshanphotosystem I
20 Ultraviolet absorbing compoundsUVACarbitrary unitsGao, Kunshan
21 Ultraviolet absorbing compounds, standard deviationUVAC std dev±Gao, Kunshan
22 Ultraviolet radiation-induced inhibitionUVR inhib%Gao, KunshanGrowth rate
23 Ultraviolet radiation-induced inhibition, standard deviationUVR inhib std dev±Gao, KunshanGrowth rate, standard deviation
24 Ultraviolet radiation-induced inhibitionUVR inhib%Gao, KunshanMaximal electron transport rate, relative
25 Ultraviolet radiation-induced inhibition, standard deviationUVR inhib std dev±Gao, KunshanMaximal electron transport rate, relative, standard deviation
26 Ultraviolet radiation-induced inhibitionUVR inhib%Gao, KunshanMaximum photochemical quantum yield of photosystem II
27 Ultraviolet radiation-induced inhibition, standard deviationUVR inhib std dev±Gao, KunshanMaximum photochemical quantum yield of photosystem II, standard deviation
28 Ultraviolet radiation-induced inhibitionUVR inhib%Gao, KunshanEffective quantum yield of photosystem II
29 Ultraviolet radiation-induced inhibition, standard deviationUVR inhib std dev±Gao, KunshanEffective quantum yield of photosystem II, standard deviation
30 Ultraviolet radiation-induced inhibitionUVR inhib%Gao, KunshanNon photochemical quenching
31 Ultraviolet radiation-induced inhibition, standard deviationUVR inhib std dev±Gao, KunshanNon photochemical quenching, standard deviation
32 Ultraviolet radiation-induced inhibitionUVR inhib%Gao, KunshanEffective quantum yield of photosystem I
33 Ultraviolet radiation-induced inhibition, standard deviationUVR inhib std dev±Gao, KunshanEffective quantum yield of photosystem I, standard deviation
34 Ultraviolet radiation-induced inhibitionUVR inhib%Gao, KunshanUltraviolet absorbing compounds
35 Ultraviolet radiation-induced inhibition, standard deviationUVR inhib std dev±Gao, KunshanUltraviolet absorbing compounds, standard deviation
36 Temperature, waterTemp°CGao, Kunshan
37 Temperature, water, standard deviationTemp std dev±Gao, Kunshan
38 SalinitySalGao, Kunshan
39 pHpHGao, Kunshantotal scale
40 pH, standard deviationpH std dev±Gao, Kunshantotal scale
41 Alkalinity, totalATµmol/kgGao, KunshanPotentiometric titration
42 Alkalinity, total, standard deviationAT std dev±Gao, KunshanPotentiometric titration
43 Carbon, inorganic, dissolvedDICµmol/kgGao, KunshanCalculated using CO2SYS
44 Carbon, inorganic, dissolved, standard deviationDIC std dev±Gao, KunshanCalculated using CO2SYS
45 Bicarbonate ion[HCO3]-µmol/kgGao, KunshanCalculated using CO2SYS
46 Bicarbonate ion, standard deviation[HCO3]- std dev±Gao, KunshanCalculated using CO2SYS
47 Carbonate ion[CO3]2-µmol/kgGao, KunshanCalculated using CO2SYS
48 Carbonate ion, standard deviation[CO3]2- std dev±Gao, KunshanCalculated using CO2SYS
49 Carbon dioxideCO2µmol/kgGao, KunshanCalculated using CO2SYS
50 Carbon dioxide, standard deviationCO2 std dev±Gao, KunshanCalculated using CO2SYS
51 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
52 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
53 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
54 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
55 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
56 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
57 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
58 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
59 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
338 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Type
(study)

Species

Reg spec no

URL ref
(WoRMS Aphia ID)

Treat

µ [%/day]

µ std dev [±]

CO2 assim r area [mg C/m2/day]

CO2 assim r std dev [±]
10 
rETR max
11 
rETR max std dev [±]
12 
Fv/Fm
13 
Fv/Fm std dev [±]
14 
Y
(photosystem II)
15 
Y std dev [±]
(photosystem II)
16 
NPQ
17 
NPQ std dev [±]
18 
Y
(photosystem I)
19 
Y std dev [±]
(photosystem I)
20 
UVAC [arbitrary units]
21 
UVAC std dev [±]
22 
UVR inhib [%]
(Growth rate)
23 
UVR inhib std dev [±]
(Growth rate, standard deviation)
24 
UVR inhib [%]
(Maximal electron transport ra...)
25 
UVR inhib std dev [±]
(Maximal electron transport ra...)
26 
UVR inhib [%]
(Maximum photochemical quantum...)
27 
UVR inhib std dev [±]
(Maximum photochemical quantum...)
28 
UVR inhib [%]
(Effective quantum yield of ph...)
29 
UVR inhib std dev [±]
(Effective quantum yield of ph...)
30 
UVR inhib [%]
(Non photochemical quenching)
31 
UVR inhib std dev [±]
(Non photochemical quenching, ...)
32 
UVR inhib [%]
(Effective quantum yield of ph...)
33 
UVR inhib std dev [±]
(Effective quantum yield of ph...)
34 
UVR inhib [%]
(Ultraviolet absorbing compounds)
35 
UVR inhib std dev [±]
(Ultraviolet absorbing compoun...)
36 
Temp [°C]
37 
Temp std dev [±]
38 
Sal
39 
pH
(total scale)
40 
pH std dev [±]
(total scale)
41 
AT [µmol/kg]
(Potentiometric titration)
42 
AT std dev [±]
(Potentiometric titration)
43 
DIC [µmol/kg]
(Calculated using CO2SYS)
44 
DIC std dev [±]
(Calculated using CO2SYS)
45 
[HCO3]- [µmol/kg]
(Calculated using CO2SYS)
46 
[HCO3]- std dev [±]
(Calculated using CO2SYS)
47 
[CO3]2- [µmol/kg]
(Calculated using CO2SYS)
48 
[CO3]2- std dev [±]
(Calculated using CO2SYS)
49 
CO2 [µmol/kg]
(Calculated using CO2SYS)
50 
CO2 std dev [±]
(Calculated using CO2SYS)
51 
CSC flag
(Calculated using seacarb afte...)
52 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
53 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
54 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
55 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
56 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
57 
DIC [µmol/kg]
(Calculated using seacarb afte...)
58 
Omega Arg
(Calculated using seacarb afte...)
59 
Omega Cal
(Calculated using seacarb afte...)
laboratoryPyropia yezoensis (macroalga)626081marinespecies.orgLow CO2-P16.65900.968451.226910.0834246.140000.760000.550480.016720.288000.022650.606470.039760.844330.0261027.944711.3317681328.2480.032375132117191930271756122811.63243.56244.531932.67180.122124.422.754.37
laboratoryPyropia yezoensis (macroalga)626081marinespecies.orgLow CO2-PA12.41371.3256542.800000.884860.528010.058950.229600.021500.519630.038620.833990.0897634.270001.5300081328.2590.032383162119191928221795111811.33237.17238.111930.23184.512126.062.824.47
laboratoryPyropia yezoensis (macroalga)626081marinespecies.orgLow CO2-PAB11.28980.8516540.261760.789520.527870.032480.200530.012540.404950.038960.831160.0372636.069351.7500081328.2490.022418152157221966251794121811.82247.45248.431968.07183.842163.732.814.46
laboratoryPyropia yezoensis (macroalga)626081marinespecies.orgHigh CO2-P19.71820.823761.652550.2176350.100001.180000.572280.044520.383000.013080.691510.036210.950650.0205734.600442.2196581327.9160.03243213231423219222923295828.41595.02597.392198.2895.392322.081.462.31
laboratoryPyropia yezoensis (macroalga)626081marinespecies.orgHigh CO2-PA16.59421.0215844.352721.426900.522110.045800.344600.012550.544190.048910.918750.1014943.357472.6750081327.9260.03242013229922217723943283827.57577.27579.562182.3696.902306.831.482.35
laboratoryPyropia yezoensis (macroalga)626081marinespecies.orgHigh CO2-PAB15.37231.5684639.323491.302490.489870.051270.337120.017810.337180.034890.906170.0878646.823393.2760081327.9240.02244412232315220030945283827.99586.05588.382205.4097.472330.861.492.36
laboratoryPyropia yezoensis (macroalga)626081marinespecies.orgLow CO2-UVA25.483581.325657.238840.884864.081890.8589520.279372.1498614.319031.586221.224640.9756222.6351.530
laboratoryPyropia yezoensis (macroalga)626081marinespecies.orgLow CO2-UVB6.756800.8516511.471611.426908.767041.1145810.302081.2541618.909401.895650.342610.0372625.3092.675
laboratoryPyropia yezoensis (macroalga)626081marinespecies.orgHigh CO2-UVA15.843101.021585.504990.789520.100000.0124810.026111.2546521.303822.489413.355331.148946.4390.270
laboratoryPyropia yezoensis (macroalga)626081marinespecies.orgHigh CO2-UVB6.203311.5684610.040321.302495.657670.512701.954860.7812529.947512.498321.324360.8798410.0171.236