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Aguilera, Victor M; Escribano, Rubén; Vargas, Cristian A; Gonzáles, M Teresa (2019): Seawater carbonate chemistry and copepod adult size, egg production, and egg size and growth [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.925450

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Abstract:
Climate change is expected to exacerbate upwelling intensity and natural acidification in Eastern Boundaries Upwelling Systems (EBUS). Conducted between January-September 2015 in a nearshore site of the northern Humboldt Current System directly exposed to year-round upwelling episodes, this study was aimed at assessing the relationship between upwelling mediated pH-changes and functional traits of the numerically dominant planktonic copepod-grazer Acartia tonsa (Copepoda). Environmental temperature, salinity, oxygen, pH, alkalinity, chlorophyll-a (Chl), copepod adult size, egg production (EP), and egg size and growth were assessed through 28 random oceanographic surveys. Agglomerative clustering and multidimensional scaling identified three main di-similitude nodes within temporal variability of abiotic and biotic variables: A) “upwelling”, B) “non-upwelling”, and C) “warm-acid” conditions. Nodes A and B represented typical features within the upwelling phenology, characterized by the transition from low temperature, oxygen, pH and Chl during upwelling to higher levels during non-upwelling conditions. However, well-oxygenated, saline and “warm-acid” node C seemed to be atypical for local climatology, suggesting the occurrence of a low frequency oceanographic perturbation. Multivariate (LDA and ANCOVA) analyses revealed upwelling through temperature, oxygen and pH were the main factors affecting variations in adult size and EP, and highlighted growth rates were significantly lower under node C. Likely buffering upwelling pH-reductions, phytoplankton biomass maintained copepod reproduction despite prevailing low temperature, oxygen and pH levels in the upwelling setting. Helping to better explain why this species is among the most recurrent ones in these variable yet productive upwelling areas, current findings also provide opportune cues on plankton responses under warm-acid conditions, which are expected to occur in productive EBUS as a consequence of climate perturbations.
Keyword(s):
Acartia tonsa; Animalia; Arthropoda; Coast and continental shelf; Field observation; Growth/Morphology; Pelagos; Reproduction; Single species; South Pacific; Temperate; Upwelling; Zooplankton
Supplement to:
Aguilera, Victor M; Escribano, Rubén; Vargas, Cristian A; Gonzáles, M Teresa (2019): Upwelling modulation of functional traits of a dominant planktonic grazer during “warm-acid” El Niño 2015 in a year-round upwelling area of Humboldt Current. PLoS ONE, 14(1), e0209823, https://doi.org/10.1371/journal.pone.0209823
Original version:
Aguilera, Victor M (2019): Discrete oceanographic time series in Antofagasta (23°S) during 2015. PANGAEA, https://doi.org/10.1594/PANGAEA.899244
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2020): seacarb: seawater carbonate chemistry with R. R package version 3.2.14. https://CRAN.R-project.org/package=seacarb
Coverage:
Latitude: -23.460136 * Longitude: -70.622217
Date/Time Start: 2015-01-22T00:00:00 * Date/Time End: 2015-09-01T00:00:00
Minimum DEPTH, water: 10 m * Maximum DEPTH, water: 10 m
Event(s):
Antofagasta_OA * Latitude: -23.460136 * Longitude: -70.622217 * Date/Time Start: 2015-05-05T00:00:00 * Date/Time End: 2015-09-30T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-12-08.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TypeTypeAguilera, Victor Mstudy
SpeciesSpeciesAguilera, Victor M
Registration number of speciesReg spec noAguilera, Victor M
Uniform resource locator/link to referenceURL refAguilera, Victor MWoRMS Aphia ID
DEPTH, waterDepth watermAguilera, Victor MGeocode
DATE/TIMEDate/TimeAguilera, Victor MGeocode
Temperature, waterTemp°CAguilera, Victor M
Oxygen, dissolvedDOml/lAguilera, Victor M
SalinitySalAguilera, Victor M
10 pHpHAguilera, Victor MPotentiometrictotal scale
11 Body sizeBody sizemmAguilera, Victor M
12 Egg production rate per femaleEPR#/female/dayAguilera, Victor M
13 Egg sizeEgg sizeµmAguilera, Victor M
14 Chlorophyll totalChl totµg/lAguilera, Victor M> 20 µm
15 Chlorophyll totalChl totµg/lAguilera, Victor M< 20 µm
16 Growth rateµ1/dayAguilera, Victor M
17 Alkalinity, totalATµmol/kgAguilera, Victor MPotentiometric titration
18 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
19 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
20 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
21 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
22 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
23 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
24 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
25 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
26 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
2004 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Type
(study)

Species

Reg spec no

URL ref
(WoRMS Aphia ID)

Depth water [m]

Date/Time

Temp [°C]

DO [ml/l]

Sal
10 
pH
(total scale, Potentiometric)
11 
Body size [mm]
12 
EPR [#/female/day]
13 
Egg size [µm]
14 
Chl tot [µg/l]
(> 20 µm)
15 
Chl tot [µg/l]
(< 20 µm)
16 
µ [1/day]
17 
AT [µmol/kg]
(Potentiometric titration)
18 
CSC flag
(Calculated using seacarb afte...)
19 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
20 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
21 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
22 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
23 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
24 
DIC [µmol/kg]
(Calculated using seacarb afte...)
25 
Omega Arg
(Calculated using seacarb afte...)
26 
Omega Cal
(Calculated using seacarb afte...)
fieldAcartia tonsa (copepod)345943marinespecies.org102015-01-22T00:0013.91.934.78.001.08830.102265.600000817.26444.84446.481926.49136.262080.022.083.25
fieldAcartia tonsa (copepod)345943marinespecies.org102015-01-22T00:0013.91.834.78.001.07850.112265.600000817.26444.84446.481926.49136.262080.022.083.25
fieldAcartia tonsa (copepod)345943marinespecies.org102015-01-22T00:0013.81.734.78.011.011850.152265.600000816.86433.15434.751920.89138.492076.252.123.31
fieldAcartia tonsa (copepod)345943marinespecies.org102015-01-27T00:0016.34.334.78.001.08840.102272.700000816.15447.42449.021906.12147.832070.102.283.53
fieldAcartia tonsa (copepod)345943marinespecies.org102015-01-27T00:0016.24.234.88.001.09850.132272.700000816.17447.08448.671906.43147.632070.242.273.53
fieldAcartia tonsa (copepod)345943marinespecies.org102015-01-27T00:0016.24.134.78.001.011850.142272.700000816.19447.39448.991907.25147.362070.812.273.52
fieldAcartia tonsa (copepod)345943marinespecies.org102015-01-29T00:0015.32.834.88.111.011880.71.50.172289.500000812.42334.33335.531847.80178.102038.322.734.25
fieldAcartia tonsa (copepod)345943marinespecies.org102015-01-29T00:0015.22.734.78.110.911790.71.00.172289.500000812.48334.60335.811850.08177.232039.792.724.23
fieldAcartia tonsa (copepod)345943marinespecies.org102015-01-29T00:0015.22.734.88.100.914850.82.10.232289.500000812.81343.63344.871857.26174.272044.332.674.16
fieldAcartia tonsa (copepod)345943marinespecies.org102015-02-03T00:0014.42.034.77.951.011890.01.50.162246.550000819.24503.46505.301936.50124.452080.191.912.97
fieldAcartia tonsa (copepod)345943marinespecies.org102015-02-03T00:0014.31.934.77.951.17770.10.90.062246.550000819.29503.37505.211937.49124.042080.821.902.96
fieldAcartia tonsa (copepod)345943marinespecies.org102015-02-03T00:0014.21.834.77.950.97790.12.10.102246.550000819.35503.28505.121938.48123.622081.461.892.95
fieldAcartia tonsa (copepod)345943marinespecies.org102015-02-05T00:0015.12.934.87.980.911850.10.20.182272.550000817.61470.95472.661932.20137.002086.812.103.27
fieldAcartia tonsa (copepod)345943marinespecies.org102015-02-05T00:0015.03.034.77.981.011790.10.10.112272.550000817.68471.20472.911934.05136.292088.022.093.26
fieldAcartia tonsa (copepod)345943marinespecies.org102015-02-05T00:0014.92.834.77.981.18780.00.40.072272.550000817.73471.14472.851935.12135.842088.692.083.25
fieldAcartia tonsa (copepod)345943marinespecies.org102015-02-10T00:0017.25.534.77.951.02792.50.40.022286.300000818.09514.69516.501942.52138.962099.572.143.32
fieldAcartia tonsa (copepod)345943marinespecies.org102015-02-10T00:0017.25.434.77.950.82822.00.30.042286.300000818.09514.69516.501942.52138.962099.572.143.32
fieldAcartia tonsa (copepod)345943marinespecies.org102015-02-10T00:0017.25.434.77.951.16853.00.60.072286.300000818.09514.69516.501942.52138.962099.572.143.32
fieldAcartia tonsa (copepod)345943marinespecies.org102015-02-17T00:0014.53.134.78.021.010830.10.50.122264.500000816.07421.91423.451905.33144.422065.832.213.45
fieldAcartia tonsa (copepod)345943marinespecies.org102015-02-17T00:0014.12.634.78.020.86860.10.40.162264.500000816.27421.73423.281909.82142.542068.632.183.40
fieldAcartia tonsa (copepod)345943marinespecies.org102015-02-17T00:0014.12.634.78.021.05840.20.50.072264.500000816.27421.73423.281909.82142.542068.632.183.40
fieldAcartia tonsa (copepod)345943marinespecies.org102015-02-24T00:0014.72.934.88.041.121880.10.50.252283.750000815.26403.22404.691904.62152.692072.562.343.64
fieldAcartia tonsa (copepod)345943marinespecies.org102015-02-24T00:0014.62.934.88.051.117800.20.40.162283.750000814.90392.50393.931898.48155.142068.522.383.70
fieldAcartia tonsa (copepod)345943marinespecies.org102015-02-24T00:0014.52.834.78.051.020820.00.70.222283.750000814.96392.75394.191900.53154.362069.852.363.69
fieldAcartia tonsa (copepod)345943marinespecies.org102015-03-03T00:0014.74.234.88.161.023840.20.50.292265.900000810.91288.16289.201794.30189.621994.832.904.53
fieldAcartia tonsa (copepod)345943marinespecies.org102015-03-03T00:0014.64.134.88.181.113780.20.30.122265.900000810.35272.55273.541778.30196.031984.683.004.68
fieldAcartia tonsa (copepod)345943marinespecies.org102015-03-03T00:0014.54.034.78.171.218840.10.70.132265.900000810.69280.53281.551789.48191.591991.762.934.58
fieldAcartia tonsa (copepod)345943marinespecies.org102015-03-09T00:0015.34.534.88.101.019800.90.70.192273.750000812.68341.17342.401842.70173.562028.942.664.14
fieldAcartia tonsa (copepod)345943marinespecies.org102015-03-09T00:0015.24.134.88.101.117790.20.50.162273.750000812.72341.18342.411844.00173.022029.742.654.13
fieldAcartia tonsa (copepod)345943marinespecies.org102015-03-09T00:0015.24.134.78.101.021801.60.80.262273.750000812.73341.44342.671844.94172.712030.382.654.13
fieldAcartia tonsa (copepod)345943marinespecies.org102015-03-16T00:0015.34.834.88.151.122793.90.40.212272.350000811.04297.00298.071799.87190.222001.122.924.54
fieldAcartia tonsa (copepod)345943marinespecies.org102015-03-16T00:0015.24.634.88.161.124853.70.20.282272.350000810.77288.87289.921792.60193.121996.492.964.61
fieldAcartia tonsa (copepod)345943marinespecies.org102015-03-16T00:0015.04.234.88.161.121844.10.50.232272.350000810.84288.93289.981795.42191.941998.202.944.58
fieldAcartia tonsa (copepod)345943marinespecies.org102015-03-23T00:0014.73.534.78.091.014840.80.20.172277.470000813.31351.49352.771862.40167.132042.842.563.99
fieldAcartia tonsa (copepod)345943marinespecies.org102015-03-23T00:0014.73.634.78.091.415830.60.20.072277.470000813.31351.49352.771862.40167.132042.842.563.99
fieldAcartia tonsa (copepod)345943marinespecies.org102015-03-23T00:0014.63.534.78.081.013840.90.20.182277.470000813.72361.17362.491871.40163.492048.612.503.90
fieldAcartia tonsa (copepod)345943marinespecies.org102015-04-02T00:0014.72.434.87.971.09830.10.70.122274.300000818.30483.68485.441944.56132.682095.552.033.17
fieldAcartia tonsa (copepod)345943marinespecies.org102015-04-02T00:0014.72.334.87.971.010810.10.50.112274.300000818.30483.68485.441944.56132.682095.552.033.17
fieldAcartia tonsa (copepod)345943marinespecies.org102015-04-02T00:0014.62.234.87.971.110840.10.90.112274.300000818.36483.60485.371945.61132.252096.212.023.16
fieldAcartia tonsa (copepod)345943marinespecies.org102015-04-06T00:0015.93.234.88.091.012850.90.50.152293.130000812.91353.69354.961859.26175.122047.292.694.18
fieldAcartia tonsa (copepod)345943marinespecies.org102015-04-06T00:0015.93.134.88.090.912820.80.40.222293.130000812.91353.69354.961859.26175.122047.292.694.18
fieldAcartia tonsa (copepod)345943marinespecies.org102015-04-06T00:0015.83.034.88.091.114901.10.70.172293.130000812.95353.70354.971860.57174.572048.092.684.17
fieldAcartia tonsa (copepod)345943marinespecies.org102015-04-14T00:0015.94.934.88.181.117810.02.00.162287.530000810.03274.78275.761777.05205.911993.003.164.92
fieldAcartia tonsa (copepod)345943marinespecies.org102015-04-14T00:0015.84.934.88.171.018850.11.70.282287.530000810.35282.66283.671787.59201.651999.583.104.82
fieldAcartia tonsa (copepod)345943marinespecies.org102015-04-14T00:0015.84.934.88.191.016890.12.20.232287.53000089.78267.18268.141769.35209.001988.133.214.99
fieldAcartia tonsa (copepod)345943marinespecies.org102015-04-20T00:0015.63.934.78.170.912821.20.30.192202.600098810.02272.01272.981722.12192.341924.482.954.60
fieldAcartia tonsa (copepod)345943marinespecies.org102015-04-20T00:0015.63.934.78.181.013821.20.20.172202.60009889.75264.47265.421713.41195.821918.973.014.68
fieldAcartia tonsa (copepod)345943marinespecies.org102015-04-20T00:0015.63.834.78.191.013801.30.40.172202.60009889.47257.12258.041704.58199.351913.413.064.76
fieldAcartia tonsa (copepod)345943marinespecies.org102015-04-28T00:0016.53.634.98.081.023840.53.50.292346.300049813.33371.91373.231903.32179.662096.312.764.29
fieldAcartia tonsa (copepod)345943marinespecies.org102015-04-28T00:0016.53.534.98.071.118840.21.90.182346.300049813.70382.22383.581911.54176.332101.572.714.21
fieldAcartia tonsa (copepod)345943marinespecies.org102015-04-28T00:0016.43.534.98.071.016830.32.30.192346.300049813.74382.22383.581912.85175.782102.372.704.20
fieldAcartia tonsa (copepod)345943marinespecies.org102015-05-05T00:0016.44.234.98.001.111790.50.20.102344.899902816.59461.49463.141965.76153.752136.092.363.67
fieldAcartia tonsa (copepod)345943marinespecies.org102015-05-05T00:0016.44.234.98.000.812840.31.20.362344.899902816.59461.49463.141965.76153.752136.092.363.67
fieldAcartia tonsa (copepod)345943marinespecies.org102015-05-05T00:0016.44.234.98.010.812860.40.50.282344.899902816.15449.29450.891958.38156.742131.272.413.74
fieldAcartia tonsa (copepod)345943marinespecies.org102015-05-12T00:0016.44.234.98.100.814810.31.20.332370.600098812.79355.84357.111908.20187.892108.882.894.49
fieldAcartia tonsa (copepod)345943marinespecies.org102015-05-12T00:0016.44.234.98.090.712810.10.60.362370.600098813.15365.76367.061916.71184.432114.292.844.40
fieldAcartia tonsa (copepod)345943marinespecies.org102015-05-12T00:0016.34.134.98.090.915850.20.90.312370.600098813.19365.77367.071918.07183.862115.122.834.39
fieldAcartia tonsa (copepod)345943marinespecies.org102015-05-19T00:0015.12.034.98.161.122870.00.80.252352.500000811.18299.28300.371858.96199.962070.103.064.77
fieldAcartia tonsa (copepod)345943marinespecies.org102015-05-19T00:0015.12.034.98.150.916800.10.90.242352.500000811.50307.72308.841867.88196.342075.723.014.68
fieldAcartia tonsa (copepod)345943marinespecies.org102015-05-19T00:0015.11.934.98.150.918830.10.60.292352.500000811.50307.72308.841867.88196.342075.723.014.68
fieldAcartia tonsa (copepod)345943marinespecies.org102015-05-27T00:0015.43.434.97.971.07870.00.50.102340.800049818.46498.40500.201994.70140.142153.292.153.34
fieldAcartia tonsa (copepod)345943marinespecies.org102015-05-27T00:0015.43.434.97.981.113821.60.10.112340.800049817.97485.39487.141987.86142.912148.742.193.41
fieldAcartia tonsa (copepod)345943marinespecies.org102015-05-27T00:0015.33.234.97.971.18820.40.50.082340.800049818.51498.34500.141995.80139.682153.982.143.33
fieldAcartia tonsa (copepod)345943marinespecies.org102015-06-02T00:0016.64.334.97.921.19800.20.40.072347.699951820.41571.23573.262021.15132.492174.052.043.16
fieldAcartia tonsa (copepod)345943marinespecies.org102015-06-02T00:0016.64.334.97.911.013810.10.40.152347.699951820.95586.40588.482027.57129.892178.412.003.10
fieldAcartia tonsa (copepod)345943marinespecies.org102015-06-02T00:0016.64.334.97.921.215810.10.50.112347.699951820.41571.23573.262021.15132.492174.052.043.16
fieldAcartia tonsa (copepod)345943marinespecies.org102015-06-08T00:0017.34.035.18.100.912810.70.20.182362.100098812.37353.75354.991886.58193.122092.072.974.61
fieldAcartia tonsa (copepod)345943marinespecies.org102015-06-08T00:0017.34.035.18.101.112820.80.40.132362.100098812.37353.75354.991886.58193.122092.072.974.61
fieldAcartia tonsa (copepod)345943marinespecies.org102015-06-08T00:0017.34.035.18.101.110810.70.10.102362.100098812.37353.75354.991886.58193.122092.072.974.61
fieldAcartia tonsa (copepod)345943marinespecies.org102015-06-15T00:0015.14.534.97.861.05800.61.10.052366.100098825.07670.89673.322088.50112.592226.161.732.69
fieldAcartia tonsa (copepod)345943marinespecies.org102015-06-15T00:0015.14.534.97.831.17800.60.60.072366.100098827.07724.54727.172104.99105.912237.971.622.53
fieldAcartia tonsa (copepod)345943marinespecies.org102015-06-15T00:0015.14.234.97.841.09800.61.60.092366.100098826.39706.23708.792099.59108.092234.071.662.58
fieldAcartia tonsa (copepod)345943marinespecies.org102015-07-07T00:0014.31.834.88.051.122820.50.10.212338.199951815.40402.09403.571948.92157.432121.762.413.76
fieldAcartia tonsa (copepod)345943marinespecies.org102015-07-07T00:0014.32.134.78.051.119820.20.30.202338.199951815.42402.38403.851949.79157.142122.362.413.75
fieldAcartia tonsa (copepod)345943marinespecies.org102015-07-07T00:0014.32.034.58.041.124810.60.20.212338.199951815.88413.89415.401958.90153.572128.352.353.67
fieldAcartia tonsa (copepod)345943marinespecies.org102015-08-04T00:0014.62.334.97.911.111810.01.00.112271.399902821.42564.73566.781979.31117.452118.181.802.80
fieldAcartia tonsa (copepod)345943marinespecies.org102015-08-04T00:0014.62.534.97.901.24800.00.80.032271.399902821.99579.58581.691985.12115.112122.221.762.75
fieldAcartia tonsa (copepod)345943marinespecies.org102015-08-04T00:0014.72.434.97.901.17820.01.20.072271.399902821.93579.70581.811984.19115.502121.611.772.76
fieldAcartia tonsa (copepod)345943marinespecies.org102015-08-18T00:0016.14.934.87.851.18804.20.40.062291.600098824.25668.20670.592018.55110.242153.031.692.63
fieldAcartia tonsa (copepod)345943marinespecies.org102015-08-18T00:0016.14.934.87.851.14803.90.40.042291.600098824.25668.20670.592018.55110.242153.031.692.63
fieldAcartia tonsa (copepod)345943marinespecies.org102015-08-18T00:0016.14.834.87.851.17794.10.50.062291.600098824.25668.20670.592018.55110.242153.031.692.63
fieldAcartia tonsa (copepod)345943marinespecies.org102015-09-01T00:0015.72.134.98.091.113810.60.30.132284.899902812.92352.12353.391854.00173.692040.612.674.14
fieldAcartia tonsa (copepod)345943marinespecies.org102015-09-01T00:0015.71.934.98.101.114810.60.30.132284.899902812.57342.60343.831845.89176.962035.422.724.22
fieldAcartia tonsa (copepod)345943marinespecies.org102015-09-01T00:0015.61.834.98.101.114820.70.30.132284.899902812.61342.62343.851847.20176.412036.222.714.21