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Harvey, Ben P; Kerfahi, Dorsaf; Jung, YeonGyun; Shin, Jae-Ho; Adams, Jonathan M; Hall-Spencer, Jason M (2020): Seawater carbonate chemistry and composition of plastic biofilm assemblages [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.925329

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Abstract:
The increasing quantity of plastic waste in the ocean is providing a growing and more widespread novel habitat for microbes. Plastics have taxonomically distinct microbial communities (termed the 'Plastisphere') and can raft these unique communities over great distances. In order to understand the Plastisphere properly it will be important to work out how major ocean changes (such as warming, acidification and deoxygenation) are shaping microbial communities on waste plastics in marine environments. Here, we show that common plastic drinking bottles rapidly become colonized by novel biofilm-forming bacterial communities, and that ocean acidification greatly influences the composition of plastic biofilm assemblages. We highlight the potential implications of this community shift in a coastal community exposed to enriched CO2 conditions.
Keyword(s):
CO2 vent; Coast and continental shelf; Community composition and diversity; Entire community; Field observation; North Pacific; Pelagos; Temperate
Supplement to:
Harvey, Ben P; Kerfahi, Dorsaf; Jung, YeonGyun; Shin, Jae-Ho; Adams, Jonathan M; Hall-Spencer, Jason M (2020): Ocean acidification alters bacterial communities on marine plastic debris. Marine Pollution Bulletin, 161, 111749, https://doi.org/10.1016/j.marpolbul.2020.111749
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2020): seacarb: seawater carbonate chemistry with R. R package version 3.2.14. https://CRAN.R-project.org/package=seacarb
Project(s):
Ocean Acidification International Coordination Centre (OA-ICC)
Coverage:
Latitude: 34.319170 * Longitude: 139.205000
Event(s):
Shikine * Latitude: 34.319170 * Longitude: 139.205000 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-11-30.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeHarvey, Ben Pstudy
2FigureFigHarvey, Ben P
3Substrate typeSubstrateHarvey, Ben P
4Substrate typeSubstrateHarvey, Ben P2
5SiteSiteHarvey, Ben P
6Alpha diversityalphaHarvey, Ben P
7Evenness of speciesEHarvey, Ben P
8Operational taxonomic unitOTUHarvey, Ben P
9PhylumPhylumHarvey, Ben P
10AbundanceAbund%Harvey, Ben P
11pHpHHarvey, Ben PPotentiometrictotal scale
12pH, standard deviationpH std dev±Harvey, Ben PPotentiometrictotal scale
13Temperature, waterTemp°CHarvey, Ben P
14Temperature, water, standard deviationTemp std dev±Harvey, Ben P
15SalinitySalHarvey, Ben P
16Salinity, standard deviationSal std dev±Harvey, Ben P
17Alkalinity, totalATµmol/kgHarvey, Ben PPotentiometric titration
18Alkalinity, total, standard deviationAT std dev±Harvey, Ben PPotentiometric titration
19Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmHarvey, Ben PCalculated using CO2SYS
20Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Harvey, Ben PCalculated using CO2SYS
21Carbon, inorganic, dissolvedDICµmol/kgHarvey, Ben PCalculated using CO2SYS
22Carbon, inorganic, dissolved, standard deviationDIC std dev±Harvey, Ben PCalculated using CO2SYS
23Bicarbonate ion[HCO3]-µmol/kgHarvey, Ben PCalculated using CO2SYS
24Bicarbonate ion, standard deviation[HCO3]- std dev±Harvey, Ben PCalculated using CO2SYS
25Carbonate ion[CO3]2-µmol/kgHarvey, Ben PCalculated using CO2SYS
26Carbonate ion, standard deviation[CO3]2- std dev±Harvey, Ben PCalculated using CO2SYS
27Calcite saturation stateOmega CalHarvey, Ben PCalculated using CO2SYS
28Calcite saturation state, standard deviationOmega Cal std dev±Harvey, Ben PCalculated using CO2SYS
29Aragonite saturation stateOmega ArgHarvey, Ben PCalculated using CO2SYS
30Aragonite saturation state, standard deviationOmega Arg std dev±Harvey, Ben PCalculated using CO2SYS
31Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33Carbon dioxide, standard deviationCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
34Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35Fugacity of carbon dioxide in seawater, standard deviationfCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
36Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
38Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39Bicarbonate ion, standard deviation[HCO3]- std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
40Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41Carbonate ion, standard deviation[CO3]2- std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
42Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
43Carbon, inorganic, dissolved, standard deviationDIC std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
44Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45Aragonite saturation state, standard deviationOmega Arg std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
46Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
47Calcite saturation state, standard deviationOmega Cal std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
46968 data points

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