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White, Emily; Hoppe, Clara Jule Marie; Rost, Björn (2019): Seawater carbonate chemistry and growth,cellular composition and photophysiological parameters of Micromonas pusilla [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.924887

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Abstract:
Compared to the rest of the globe, the Arctic Ocean is affected disproportionately by climate change. Despite these fast environmental changes, we currently know little about the effects of ocean acidification (OA) on marine key species in this area. Moreover, the existing studies typically test the effects of OA under constant, hence artificial, light fields. In this study, the abundant Arctic picoeukaryote Micromonas pusilla was acclimated to current (400 µatm) and future (1000 µatm) pCO2 levels under a constant as well as a dynamic light, simulating more realistic light fields as experienced in the upper mixed layer. To describe and understand the responses to these drivers, growth, particulate organic carbon (POC) production, elemental composition, photophysiology and reactive oxygen species (ROS) production were analysed. M. pusilla was able to benefit from OA on various scales, ranging from an increase in growth rates to enhanced photosynthetic capacity, irrespective of the light regime. These beneficial effects were, however, not reflected in the POC production rates, which can be explained by energy partitioning towards cell division rather than biomass build-up. In the dynamic light regime, M. pusilla was able to optimize its photophysiology for effective light usage during both low- and high-light periods. This photoacclimative response, which was achieved by modifications to photosystem II (PSII), imposed high metabolic costs leading to a reduction in growth and POC production rates when compared to constant light. There were no significant interactions observed between dynamic light and OA, indicating that M. pusilla is able to maintain effective photoacclimation without increased photoinactivation under high pCO2. Based on these findings, M. pusilla is likely to cope well with future conditions in the Arctic Ocean.
Keyword(s):
Arctic; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chlorophyta; Coast and continental shelf; Growth/Morphology; Laboratory experiment; Light; Micromonas pusilla; Pelagos; Phytoplankton; Plantae; Polar; Primary production/Photosynthesis; Single species
Supplement to:
White, Emily; Hoppe, Clara Jule Marie; Rost, Björn (2020): The Arctic picoeukaryote Micromonas pusilla benefits from ocean acidification under constant and dynamic light. Biogeosciences, 17(3), 635-647, https://doi.org/10.5194/bg-17-635-2020
Original version:
White, Emily; Hoppe, Clara Jule Marie; Rost, Björn (2019): The Arctic picoeukaryote Micromonas pusilla benefits from Ocean Acidification under constant and dynamic light. PANGAEA, https://doi.org/10.1594/PANGAEA.908691
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2020): seacarb: seawater carbonate chemistry with R. R package version 3.2.14. https://CRAN.R-project.org/package=seacarb
Coverage:
Latitude: 78.916670 * Longitude: 11.933330
Event(s):
KongsfjordenOA * Latitude: 78.916670 * Longitude: 11.933330 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-11-11.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TypeTypeWhite, Emilystudy
SpeciesSpeciesWhite, Emily
Registration number of speciesReg spec noWhite, Emily
Uniform resource locator/link to referenceURL refWhite, EmilyWoRMS Aphia ID
TreatmentTreatWhite, Emily
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmWhite, Emily
Growth rateµ1/dayWhite, Emily
Division rateDiv rate1/dayWhite, Emily
Particulate organic carbon production per cellPOC prod/cellpg/#/dayWhite, Emily
10 Carbon, organic, particulate, per cellPOC/cellpg/#White, Emily
11 Particulate organic nitrogen per cellPON/cellpg/#White, Emily
12 Chlorophyll a per cellChl a/cellpg/#White, Emily
13 Carbon/Nitrogen ratioC/NWhite, Emily
14 Carbon, organic, particulate/chlorophyll a ratioPOC/Chl ag/gWhite, Emily
15 IndexIndexWhite, EmilyTime point (1 = midday; 2 = evening (start of the dark cycle))
16 Quantum yield efficiency of photosystem IIFv/FmWhite, Emily
17 Photosystem II connectivityPSII connectWhite, Emily
18 Spectral irradiance, downward at 810 nm, standard deviationEd_810 std dev±White, Emily
19 Non photochemical quenchingNPQWhite, Emily
20 Photosystem II re-opening rateTaumsWhite, Emily
21 Electron transport rate, relative, maximumrETR maxmol e/mol RCII/sWhite, Emily
22 Light saturation pointIkµmol/m2/sWhite, EmilyLight saturation index
23 Maximum light use efficiencyalphamol e m2/mol RCII/mol photonsWhite, EmilyLight harvesting efficiency
24 Fluorescence, oxygen free radicalsF [O2]-White, EmilyRelative concentration of oxygen free radicals
25 Fluorescence, hydrogen peroxideF H2O2White, EmilyRelative concentration of hydrogen peroxide
26 Temperature, waterTemp°CWhite, Emily
27 Temperature, waterTemp°CWhite, Emily
28 Carbon, inorganic, dissolvedDICµmol/kgWhite, EmilyCalculated using CO2SYS
29 Carbon, inorganic, dissolved, standard deviationDIC std dev±White, EmilyCalculated using CO2SYS
30 Alkalinity, totalATµmol/kgWhite, EmilyPotentiometric titration
31 Alkalinity, total, standard deviationAT std dev±White, EmilyPotentiometric titration
32 pHpHWhite, EmilyPotentiometricNBS scale
33 pH, standard deviationpH std dev±White, EmilyPotentiometricNBS scale
34 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmWhite, EmilyCalculated using CO2SYS
35 Partial pressure of carbon dioxide, standard deviationpCO2 std dev±White, EmilyCalculated using CO2SYS
36 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
38 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
43 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
44 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1834 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Type
(study)

Species

Reg spec no

URL ref
(WoRMS Aphia ID)

Treat

pCO2water_SST_wet [µatm]

µ [1/day]

Div rate [1/day]

POC prod/cell [pg/#/day]
10 
POC/cell [pg/#]
11 
PON/cell [pg/#]
12 
Chl a/cell [pg/#]
13 
C/N
14 
POC/Chl a [g/g]
15 
Index
(Time point (1 = midday; 2 = e...)
16 
Fv/Fm
17 
PSII connect
18 
Ed_810 std dev [±]
19 
NPQ
20 
Tau [ms]
21 
rETR max [mol e/mol RCII/s]
22 
Ik [µmol/m2/s]
(Light saturation index)
23 
alpha [mol e m2/mol RCII/mol photons]
(Light harvesting efficiency)
24 
F [O2]-
(Relative concentration of oxy...)
25 
F H2O2
(Relative concentration of hyd...)
26 
Temp [°C]
27 
Temp [°C]
28 
DIC [µmol/kg]
(Calculated using CO2SYS)
29 
DIC std dev [±]
(Calculated using CO2SYS)
30 
AT [µmol/kg]
(Potentiometric titration)
31 
AT std dev [±]
(Potentiometric titration)
32 
pH
(NBS scale, Potentiometric)
33 
pH std dev [±]
(NBS scale, Potentiometric)
34 
pCO2water_SST_wet [µatm]
(Calculated using CO2SYS)
35 
pCO2 std dev [±]
(Calculated using CO2SYS)
36 
CSC flag
(Calculated using seacarb afte...)
37 
pH
(total scale, Calculated using...)
38 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
39 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
40 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
41 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
42 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
43 
DIC [µmol/kg]
(Calculated using seacarb afte...)
44 
Omega Arg
(Calculated using seacarb afte...)
45 
Omega Cal
(Calculated using seacarb afte...)
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laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light4000.69441.00180.095890.13810.01630.01168.5759143.4199232.2212216219488.150.0739764268.0521.75367.30368.881960.7492.412074.901.402.24
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light4000.69531.00310.133240.19160.02170.01148.7366202.3893232.2212216219488.150.0739764268.0521.75367.30368.881960.7492.412074.901.402.24
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light4000.71371.02970.132820.18610.01990.011010.1079203.3950232.2212216219488.150.0739764268.0521.75367.30368.881960.7492.412074.901.402.24
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light10000.72741.04940.096350.13250.01600.00908.6342176.7967232.222026221557.790.0295649267.7053.37901.43905.302105.4143.422202.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light10000.75611.09080.208530.15520.01330.009911.6507188.1101232.222026221557.790.0295649267.7053.37901.43905.302105.4143.422202.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light10000.73031.05360.117360.19030.02760.00946.8880243.2779232.222026221557.790.0295649267.7053.37901.43905.302105.4143.422202.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light10000.71241.02780.242480.34050.02770.009212.2748444.0000232.222026221557.790.0295649267.7053.37901.43905.302105.4143.422202.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light4000.36350.52440.059480.13170.02000.01006.6005158.6481232.2215615220788.060.0149218267.9627.44463.56465.562012.4277.132117.001.171.87
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light4000.37640.54300.044910.15800.02330.01056.8123180.6378232.2215615220788.060.0149218267.9627.44463.56465.562012.4277.132117.001.171.87
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light4000.35700.51500.053080.12580.01520.01088.3838140.5327232.2215615220788.060.0149218267.9627.44463.56465.562012.4277.132117.001.171.87
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light4000.36890.53220.073890.14390.01670.00998.8149173.9027232.2215615220788.060.0149218267.9627.44463.56465.562012.4277.132117.001.171.87
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light4000.37560.54190.050280.19670.02640.01077.9009221.0982232.2215615220788.060.0149218267.9627.44463.56465.562012.4277.132117.001.171.87
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light10000.40610.58590.041160.12380.01540.00978.4689153.6898232.2221611220877.790.0296353267.7053.21898.80902.672098.7243.272195.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light10000.40410.58300.062950.10190.01200.01019.1747120.7218232.2221611220877.790.0296353267.7053.21898.80902.672098.7243.272195.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light10000.38370.55360.060110.16410.02300.00987.3593201.0946232.2221611220877.790.0296353267.7053.21898.80902.672098.7243.272195.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light10000.44090.63610.047870.13630.02350.00785.8124210.8835232.2221611220877.790.0296353267.7053.21898.80902.672098.7243.272195.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light40010.479750.376006.3075010.33576.75595.700076.78107.76000.034514.8951232.2212216219488.150.0739764268.0521.75367.30368.881960.7492.412074.901.402.24
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light40010.434000.250254.9850011.75620.25384.560061.43676.26000.030717.4824232.2212216219488.150.0739764268.0521.75367.30368.881960.7492.412074.901.402.24
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light40010.419750.322505.3100016.48597.50355.880040.83628.71000.026020.7502232.2212216219488.150.0739764268.0521.75367.30368.881960.7492.412074.901.402.24
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light40010.437000.346755.137508.96626.25524.5100110.59824.74000.023118.9521232.2212216219488.150.0739764268.0521.75367.30368.881960.7492.412074.901.402.24
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light100010.481000.330755.205007.70609.00486.1394106.68784.56000.026919.7992232.222026221557.790.0295649267.7053.37901.43905.302105.4143.422202.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light100010.464750.364255.667508.74588.00589.8260118.50934.98000.012618.2034232.222026221557.790.0295649267.7053.37901.43905.302105.4143.422202.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light100010.480750.282755.255007.52616.00523.1952105.27094.97000.023718.5554232.222026221557.790.0295649267.7053.37901.43905.302105.4143.422202.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light100010.480500.335255.047507.76631.00605.8033201.20843.01000.032929.8710232.222026221557.790.0295649267.7053.37901.43905.302105.4143.422202.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light40010.492000.327755.760000.67608.25389.490047.38548.2200232.2215615220788.060.0149218267.9627.44463.56465.562012.4277.132117.001.171.87
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light40010.503250.366506.647500.67545.25604.630074.89268.07000.028315.6444232.2215615220788.060.0149218267.9627.44463.56465.562012.4277.132117.001.171.87
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light40010.496000.384756.590000.67559.50552.390065.90358.38000.016314.7596232.2215615220788.060.0149218267.9627.44463.56465.562012.4277.132117.001.171.87
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light40010.485250.399256.655000.68570.00700.3100104.64566.69000.024816.6852232.2215615220788.060.0149218267.9627.44463.56465.562012.4277.132117.001.171.87
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light40010.479750.376006.307500.66576.75569.300065.90008.64000.023718.3150232.2215615220788.060.0149218267.9627.44463.56465.562012.4277.132117.001.171.87
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light100010.506750.400506.555000.67564.00576.360065.48008.80000.014420.9272232.2221611220877.790.0296353267.7053.21898.80902.672098.7243.272195.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light100010.468000.411006.507500.66569.50664.570083.52007.96000.018519.9736232.2221611220877.790.0296353267.7053.21898.80902.672098.7243.272195.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light100010.477500.397256.807500.64551.50699.500078.03008.96000.020526.5351232.2221611220877.790.0296353267.7053.21898.80902.672098.7243.272195.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light100010.486250.422506.852500.66545.75679.224486.53417.84920.031416.5553232.2221611220877.790.0296353267.7053.21898.80902.672098.7243.272195.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light40020.459000.258255.1925011.82615.75329.650050.81876.49000.027417.7163232.2212216219488.150.0739764268.0521.75367.30368.881960.7492.412074.901.402.24
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light40020.453750.308505.0800013.93630.25357.200062.55445.71000.030517.4271232.2212216219488.150.0739764268.0521.75367.30368.881960.7492.412074.901.402.24
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light40020.450250.450250.2837510.55612.25381.930062.02216.16000.019518.8074232.2212216219488.150.0739764268.0521.75367.30368.881960.7492.412074.901.402.24
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light40020.478750.295505.3575014.37609.25405.230070.37015.76000.020919.3760232.2212216219488.150.0739764268.0521.75367.30368.881960.7492.412074.901.402.24
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light100020.450000.329505.4550014.79612.25392.906766.90055.87000.015016.5526232.222026221557.790.0295649267.7053.37901.43905.302105.4143.422202.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light100020.504750.321005.590005.30586.50278.8903185.17421.51000.019424.6306232.222026221557.790.0295649267.7053.37901.43905.302105.4143.422202.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light100020.502750.324505.6100010.17600.25503.1057105.65944.76000.023121.3752232.222026221557.790.0295649267.7053.37901.43905.302105.4143.422202.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgConstant Light100020.498000.273255.322509.12598.75489.5064133.10783.68000.03365.1526232.222026221557.790.0295649267.7053.37901.43905.302105.4143.422202.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light40020.540250.400506.882500.69563.50551.240063.26848.71000.010516.2550232.2215615220788.060.0149218267.9627.44463.56465.562012.4277.132117.001.171.87
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light40020.542750.394007.082500.73543.00487.510048.510710.05000.029416.4879232.2215615220788.060.0149218267.9627.44463.56465.562012.4277.132117.001.171.87
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light40020.544750.406756.880000.72564.75540.260065.74388.22000.020215.8252232.2215615220788.060.0149218267.9627.44463.56465.562012.4277.132117.001.171.87
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light40020.535250.386756.490000.71586.00491.490047.691410.31000.020524.2177232.2215615220788.060.0149218267.9627.44463.56465.562012.4277.132117.001.171.87
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light40020.535750.405256.085000.71606.50580.790075.17007.73000.025421.5992232.2215615220788.060.0149218267.9627.44463.56465.562012.4277.132117.001.171.87
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light100020.536500.425256.470000.70580.00576.360077.83007.41000.020422.6849232.2221611220877.790.0296353267.7053.21898.80902.672098.7243.272195.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light100020.546500.438257.312500.71540.50665.260082.59008.06000.016517.6135232.2221611220877.790.0296353267.7053.21898.80902.672098.7243.272195.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light100020.536750.402506.667500.68571.00626.520077.06008.13000.027020.9506232.2221611220877.790.0296353267.7053.21898.80902.672098.7243.272195.200.661.05
laboratoryMicromonas pusilla (phytoplankton)134564marinespecies.orgDynamic Light100020.548500.408006.627500.72584.00690.330499.31436.95100.025717.7475232.2221611220877.790.0296353267.7053.21898.80902.672098.7243.272195.200.661.05