Glodowska, Martyna; Stopelli, Emiliano; Schneider, Magnus; Rathi, Bhasker; Straub, Daniel; Lightfoot, Alex; Kipfer, Rolf; Berg, Michael; Jetten, Mike S M; Kleindienst, Sara; Kappler, Andreas (2020): Quantitative PCR data corresponding to archaea 16S genes [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.924773, In: Glodowska, M et al. (2020): Arsenic mobilization by anaerobic iron-dependent methane oxidation [dataset bundled publication]. PANGAEA, https://doi.org/10.1594/PANGAEA.924771
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Related to:
Glodowska, Martyna; Stopelli, Emiliano; Schneider, Magnus; Rathi, Bhasker; Straub, Daniel; Lightfoot, Alex; Kipfer, Rolf; Berg, Michael; Jetten, Mike S M; Kleindienst, Sara; Kappler, Andreas; AdvectAs Team Members (2020): Arsenic mobilization by anaerobic iron-dependent methane oxidation. Communications Earth & Environment, 1, 42, https://doi.org/10.1038/s43247-020-00037-y
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Replication | Repl | Glodowska, Martyna | |||
| 2 | Treatment | Treat | Glodowska, Martyna | |||
| 3 | Time, incubation | T incubation | day | Glodowska, Martyna | ||
| 4 | Starting quantity | SQ | Glodowska, Martyna | |||
| 5 | Starting quantity | SQ | Glodowska, Martyna | Mean | ||
| 6 | Starting quantity, standard deviation | SQ std | ± | Glodowska, Martyna | ||
| 7 | Male, mature | Male m | # | Glodowska, Martyna | sample volume | |
| 8 | Dilution factor | Dilution | Glodowska, Martyna | |||
| 9 | Deoxyribonucleic acid extract | DNA extract | µl | Glodowska, Martyna | ||
| 10 | Mass | Mass | g | Glodowska, Martyna | ||
| 11 | Gene copies per gram sediment | GCN per sed | #/g | Glodowska, Martyna | ||
| 12 | Gene copies per gram sediment | GCN per sed | #/g | Glodowska, Martyna | Mean | |
| 13 | Gene copies per gram sediment, standard deviation | GCN per sed std | ± | Glodowska, Martyna |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Size:
297 data points
Data
| 1 Repl | 2 Treat | 3 T incubation [day] | 4 SQ | 5 SQ (Mean) | 6 SQ std [±] | 7 Male m [#] (sample volume) | 8 Dilution | 9 DNA extract [µl] | 10 Mass [g] | 11 GCN per sed [#/g] | 12 GCN per sed [#/g] (Mean) | 13 GCN per sed std [±] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | Raw sed | 0 | 355.40 | 363 | 23.5 | 1 | 10 | 80 | 25.81 | 11014.29 | 11237.42 | 729.56 |
| 2 | Raw sed | 388.90 | 363 | 23.5 | 1 | 10 | 80 | 25.81 | 12052.49 | |||
| 3 | Raw sed | 343.50 | 363 | 23.5 | 1 | 10 | 80 | 25.81 | 10645.49 | |||
| 1 | CH4/1 | 125 | 7054.00 | 6890 | 510.0 | 1 | 23 | 30 | 12.48 | 389965.75 | 380659.79 | 28182.60 |
| 2 | CH4/1 | 7290.00 | 6890 | 510.0 | 1 | 23 | 30 | 12.48 | 403012.52 | |||
| 3 | CH4/1 | 6313.00 | 6890 | 510.0 | 1 | 23 | 30 | 12.48 | 349001.10 | |||
| 1 | CH4/2 | 125 | 75860.00 | 75200 | 9530.0 | 1 | 20 | 20 | 13.01 | 2332135.65 | 2310923.24 | 292785.55 |
| 2 | CH4/2 | 84330.00 | 75200 | 9530.0 | 1 | 20 | 20 | 13.01 | 2592525.70 | |||
| 3 | CH4/2 | 65320.00 | 75200 | 9530.0 | 1 | 20 | 20 | 13.01 | 2008108.37 | |||
| 1 | CH4/3 | 125 | 7599.00 | 7030 | 1190.0 | 1 | 10 | 20 | 11.05 | 137522.90 | 127291.78 | 21492.83 |
| 3 | CH4/3 | 7833.00 | 7030 | 1190.0 | 1 | 10 | 20 | 11.05 | 141757.72 | |||
| 3 | CH4/3 | 5669.00 | 7030 | 1190.0 | 1 | 10 | 20 | 11.05 | 102594.73 | |||
| 1 | CH4/4 | 221 | 1283000.00 | 1290000 | 16600.0 | 1 | 10 | 30 | 21.62 | 17802960.22 | 17909343.20 | 233980.39 |
| 2 | CH4/4 | 1310000.00 | 1290000 | 16600.0 | 1 | 10 | 30 | 21.62 | 18177613.32 | |||
| 3 | CH4/4 | 1279000.00 | 1290000 | 16600.0 | 1 | 10 | 30 | 21.62 | 17747456.06 | |||
| 1 | CH4/5 | 221 | 213100.00 | 217000 | 6700.0 | 1 | 10 | 30 | 19.85 | 3220654.91 | 3278085.64 | 100784.63 |
| 2 | CH4/5 | 224600.00 | 217000 | 6700.0 | 1 | 10 | 30 | 19.85 | 3394458.44 | |||
| 3 | CH4/5 | 213000.00 | 217000 | 6700.0 | 1 | 10 | 30 | 19.85 | 3219143.58 | |||
| 1 | CH4/6 | 221 | 252100.00 | 264000 | 12100.0 | 1 | 10 | 30 | 20.48 | 3692871.09 | 3866699.22 | 177344.93 |
| 2 | CH4/6 | 276300.00 | 264000 | 12100.0 | 1 | 10 | 30 | 20.48 | 4047363.28 | |||
| 3 | CH4/6 | 263500.00 | 264000 | 12100.0 | 1 | 10 | 30 | 20.48 | 3859863.28 | |||
| 1 | CON+/4 | 221 | 102.20 | 129 | 37.8 | 1 | 10 | 30 | 30.06 | 1019.96 | 1286.93 | 266.97 |
| 3 | CON+/4 | 155.70 | 129 | 37.8 | 1 | 10 | 30 | 30.06 | 1553.89 | |||
| 3 | CON+/4 | 128.95 | 129 | 37.8 | 1 | 10 | 30 | 30.06 | 1286.93 | |||
| 1 | CON-/4 | 221 | 2112.00 | 1580 | 752.0 | 1 | 5 | 30 | 26.10 | 12137.93 | 9083.33 | 3054.60 |
| 2 | CON-/4 | 1049.00 | 1580 | 752.0 | 1 | 5 | 30 | 26.10 | 6028.74 | |||
| 3 | CON-/4 | 1580.50 | 0 | 0.0 | 1 | 5 | 30 | 26.10 | 9083.33 |