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Kottmeier, Dorothee; Terbrüggen, Anja; Wolf-Gladrow, Dieter A; Thoms, Silke (2020): Results of a 24-hour laboratory experiment sampling cell concentrations, particulate organic carbon (POC), particulate inorganic carbon (PIC) and further cell parameters of the coccolithophore Emiliania huxleyi grown under a 16:8 h light/dark cycle [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.924440

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Abstract:
Cell division of the coccolithophore Emiliania huxleyi and other phytoplankton typically becomes entrained to diel light/dark cycles under laboratory conditions, with division occurring primarily during dark phases and production occurring during light phases. Under these conditions, the increase in a culture's cell and biomass concentrations deviates from an exponential function on time scales < 24 h. We here present a dataset of short-term changes in cell and biomass concentrations of fast dividing, dilute-batch cultures of E. huxleyi grown under a 16:8 h light/dark cycle. This dataset was used to derive linear models describing the diel course in the concentrations of cells, particulate organic carbon (POC) and particulate inorganic carbon (PIC) and for the calculation of daily means of cellular quotas and production rates in Kottmeier et al. (2020). We also present the given seawater carbonate chemistry as well as cellular quotas of particulate organic nitrogen (PON) and chlorophyll a (Chl. a), and the ratios of PIC:POC, POC:PON, POC:cell volume and Chl. a:POC in the course of the 24 h sampling period.
Keyword(s):
Exponential growth; Light/dark cycles; Phased cell division; PIC production; POC production
Related to:
Kottmeier, Dorothee; Terbrüggen, Anja; Wolf-Gladrow, Dieter A; Thoms, Silke (2020): Diel variations in cell division and biomass production of Emiliania huxleyi - Consequences for the calculation of physiological cell parameters. Limnology and Oceanography, 65(8), 1781-1800, https://doi.org/10.1002/lno.11418
Funding:
European Research Council (ERC), grant/award no. 205150: SEACELLS - Marine phytoplankton as biogeochemical drivers: Scaling from membranes and single cells to populations
Federal Ministry of Education and Research (BMBF), grant/award no. 031A518C: ZeBiCa2: Zellfreie Biomineralisation
Coverage:
Latitude: -42.180000 * Longitude: 169.500000
Date/Time Start: 1998-10-17T23:30:00 * Date/Time End: 1998-10-17T23:30:00
Minimum Elevation: 0.0 m * Maximum Elevation: 10.0 m
Event(s):
SO136_006-A_HPN (1) * Latitude: -42.180000 * Longitude: 169.500000 * Date/Time: 1998-10-17T23:30:00 * Elevation Start: 0.0 m * Elevation End: 10.0 m * Campaign: SO136 (TASQWA) * Basis: Sonne * Method/Device: Hand net (HN)
Comment:
Relative concentrations refer to concentrations relative to initial (t0) concentrations.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
Cell concentration, relativeCell conc relKottmeier, DorotheeCoulter counter, Beckman Coulter, Multisizer 3#/ml (#/ml)t0-1
SpeciesSpeciesKottmeier, Dorothee
Registration number of speciesReg spec noKottmeier, Dorothee
Uniform resource locator/link to referenceURL refKottmeier, DorotheeWoRMS Aphia ID
StrainStrainKottmeier, Dorothee
Uniform resource locator/link to referenceURL refKottmeier, DorotheeRoscoff Culture Collection
StageStageKottmeier, DorotheeLife cycle stage
IrradianceEµmol/m2/sKottmeier, DorotheeLight meter (LM)
Treatment: light:dark cycleT:L:Dhh:hhKottmeier, Dorothee
10 Growth rateµ1/dayKottmeier, DorotheeCoulter counter, Beckman Coulter, Multisizer 3
11 Growth rate, standard deviationµ std dev±Kottmeier, DorotheeCoulter counter, Beckman Coulter, Multisizer 3
12 SalinitySalKottmeier, DorotheeSalinometer (SALINO)
13 Temperature, waterTemp°CKottmeier, DorotheeTemperature sensor
14 pHpHKottmeier, DorotheePotentiometricNBS scale
15 pH, standard deviationpH std dev±Kottmeier, DorotheePotentiometricNBS scale
16 Alkalinity, totalATµmol/kgKottmeier, DorotheeAlkalinity, potentiometricDickson-corrected
17 Alkalinity, total, standard deviationAT std dev±Kottmeier, DorotheeAlkalinity, potentiometricDickson-corrected
18 Carbon, inorganic, dissolvedDICµmol/kgKottmeier, DorotheeColorimetric autoanalysis
19 Consumption of carbon, inorganic, dissolved, standard deviationDIC consumpt std dev±Kottmeier, DorotheeColorimetric autoanalysis
20 Carbon dioxide, partial pressurepCO2µatmKottmeier, DorotheeCalculated using CO2SYS
21 Carbon dioxide, partial pressure, standard deviationpCO2 std dev±Kottmeier, DorotheeCalculated using CO2SYS
22 IdentificationIDKottmeier, DorotheeCulture ID
23 Time in hoursTimehKottmeier, Dorotheewithin dark:light cycle
24 PhasePhaseKottmeier, Dorothee
25 Cell concentration, relativeCell conc relKottmeier, DorotheeCoulter counter, Beckman Coulter, Multisizer 3#/ml (#/ml)t0-1
26 Carbon, organic, particulate, relative concentrationPOC conc relKottmeier, DorotheeElemental analyzer, EuroVector, EA 3000g/ml (g/ml)t0-1
27 Carbon, inorganic, particulate, relative concentrationPIC conc relKottmeier, DorotheeElemental analyzer, EuroVector, EA 3000g/ml (g/ml)t0-1
28 Carbon, organic, particulate, per cellPOC/cellpg/#Kottmeier, DorotheeElemental analyzer, EuroVector, EA 3000
29 Carbon, inorganic, particulate, per cellPIC/cellpg/#Kottmeier, DorotheeElemental analyzer, EuroVector, EA 3000
30 Nitrogen, organic, particulate, per cellPON/cellpg/#Kottmeier, DorotheeElemental analyzer, EuroVector, EA 3000
31 Chlorophyll a per cellChl a/cellpg/#Kottmeier, DorotheeFluorometer, Turner Design, TD-700
32 Particulate inorganic carbon/particulate organic carbon ratioPIC/POCKottmeier, Dorotheemol/mol
33 Carbon, organic, particulate/Nitrogen, organic, particulate ratioPOC/PONmol/molKottmeier, Dorothee
34 Carbon, organic, particulatePOCfg/µm3Kottmeier, Dorotheeper cell volume
35 Chlorophyll a/particulate organic carbon ratioChl a/POCKottmeier, Dorotheeg/g
Size:
1983 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Cell conc rel
(#/ml (#/ml)t0-1, Coulter coun...)

Species

Reg spec no

URL ref
(WoRMS Aphia ID)

Strain

URL ref
(Roscoff Culture Collection)

Stage
(Life cycle stage)

E [µmol/m2/s]
(Light meter)

T:L:D [hh:hh]
10 
µ [1/day]
(Coulter counter, Beckman Coul...)
11 
µ std dev [±]
(Coulter counter, Beckman Coul...)
12 
Sal
(Salinometer)
13 
Temp [°C]
(Temperature sensor)
14 
pH
(NBS scale, Potentiometric)
15 
pH std dev [±]
(NBS scale, Potentiometric)
16 
AT [µmol/kg]
(Dickson-corrected, Alkalinity...)
17 
AT std dev [±]
(Dickson-corrected, Alkalinity...)
18 
DIC [µmol/kg]
(Colorimetric autoanalysis)
19 
DIC consumpt std dev [±]
(Colorimetric autoanalysis)
20 
pCO2 [µatm]
(Calculated using CO2SYS)
21 
pCO2 std dev [±]
(Calculated using CO2SYS)
22 
ID
(Culture ID)
23 
Time [h]
(within dark:light cycle)
24 
Phase
25 
Cell conc rel
(#/ml (#/ml)t0-1, Coulter coun...)
26 
POC conc rel
(g/ml (g/ml)t0-1, Elemental an...)
27 
PIC conc rel
(g/ml (g/ml)t0-1, Elemental an...)
28 
POC/cell [pg/#]
(Elemental analyzer, EuroVecto...)
29 
PIC/cell [pg/#]
(Elemental analyzer, EuroVecto...)
30 
PON/cell [pg/#]
(Elemental analyzer, EuroVecto...)
31 
Chl a/cell [pg/#]
(Fluorometer, Turner Design, T...)
32 
PIC/POC
(mol/mol)
33 
POC/PON [mol/mol]
34 
POC [fg/µm3]
(per cell volume)
35 
Chl a/POC
(g/g)
1.00Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802I0.5Dark1.000.990.9119.0920.392.100.201.079.831260.011
1.20Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802I1.5Dark1.201.020.8416.2915.671.770.190.9610.201220.012
1.48Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802I3.5Dark1.481.0513.641.600.209.971200.015
1.73Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802I4.5Dark1.731.1813.171.820.198.451220.014
1.73Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802I5.5Dark1.730.801.188.8415.171.180.211.727.40860.024
1.92Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802I6.5Dark1.920.820.958.1511.010.980.141.358.79850.017
2.05Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802I7.5Dark2.051.011.059.4911.491.270.161.218.381060.017
2.17Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802I8.5Light2.171.081.079.5910.951.350.141.147.891110.015
2.17Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802I9.5Light2.171.021.079.0311.021.230.161.228.351050.018
2.44Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802I10.5Light2.441.030.938.128.481.160.131.048.80930.016
2.73Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802I11.5Light2.731.381.089.668.781.040.150.9110.431080.015
1.00Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802II0.5Dark1.001.010.9417.8118.911.980.241.0611.391190.014
1.17Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802II1.5Dark1.171.2418.751.340.2116.331410.011
1.36Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802II2.5Dark1.361.031.0713.4315.951.550.191.1913.641150.014
1.47Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802II3.5Dark1.470.961.1211.5315.381.330.171.3310.801030.015
1.58Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802II4.5Dark1.581.011.0811.3313.881.150.211.2312.121070.018
1.76Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802II5.5Dark1.760.951.109.5312.601.070.131.3210.42940.013
1.94Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802II6.5Dark1.941.040.939.469.721.170.171.039.401000.018
2.05Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802II7.5Dark2.050.950.778.177.601.070.160.938.87920.020
2.26Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802II8.5Light2.260.830.876.477.830.860.161.218.81760.024
2.30Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802II9.5Light2.300.951.117.279.770.960.161.349.79860.022
2.51Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802II10.5Light2.511.030.867.296.841.190.140.949.23850.020
2.65Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802II11.5Light2.651.211.218.079.221.120.161.149.33920.019
3.04Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802III12.5Light3.041.291.258.109.321.350.151.158.75920.019
3.17Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802III13.5Light3.171.441.068.657.591.260.889.5497
3.16Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802III14.5Light3.161.481.378.949.851.361.109.5495
3.28Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802III15.5Light3.281.871.8510.8612.801.450.171.189.631090.016
3.02Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802III16.5Light3.021.871.6511.8512.371.370.181.0410.951110.015
3.05Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802III17.5Light3.051.961.5512.2211.511.500.190.9411.051090.015
3.12Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802III18.5Light3.121.942.2211.8816.151.250.251.3611.051010.021
3.23Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802III19.5Light3.232.402.2814.1715.991.620.221.1310.851160.015
3.08Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802III20.5Light3.082.522.4715.6218.181.711.1611.86120
2.94Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802III21.5Light2.942.432.8415.7621.931.860.181.3910.501150.011
2.81Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802III22.5Light2.812.752.4518.6719.752.460.231.0610.441320.013
3.00Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802III23.5Light3.003.213.0120.4422.762.460.281.119.681370.014
1.00Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802IV0.5Dark1.000.940.8820.3219.102.050.240.9412.041340.012
1.27Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802IV1.5Dark1.271.0918.751.840.2511.861420.013
1.38Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802IV2.5Dark1.380.900.9614.1715.211.450.191.0711.991180.014
1.54Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802IV3.5Dark1.540.871.1411.8213.781.400.181.0511.611070.016
1.68Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802IV4.5Dark1.680.761.149.9014.801.030.181.5011.15940.018
1.77Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802IV5.5Dark1.770.911.0011.1412.341.290.161.1112.761090.014
3.12Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802IV18.5Light3.121.952.0314.2214.381.430.201.0113.231110.014
3.06Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802IV19.5Light3.062.092.2015.5015.851.520.211.0212.821150.014
3.06Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802IV20.5Light3.062.342.2917.3416.471.640.230.9512.871220.014
3.07Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802IV21.5Light3.072.512.4918.5417.891.750.280.9612.721240.015
3.05Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802IV22.5Light3.052.532.8118.8920.361.820.261.0812.081210.014
3.05Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802IV23.5Light3.052.852.7221.2419.712.260.290.9311.771320.014
1.93Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802V6.5Dark1.931.010.969.849.861.250.161.009.661030.016
2.00Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802V7.5Dark2.000.910.798.537.831.040.140.9211.00970.017
2.07Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802V8.5Light2.070.890.898.108.381.280.141.039.38970.017
2.28Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802V9.5Light2.280.920.967.568.301.010.151.1011.17910.020
2.58Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802V10.5Light2.581.141.178.268.950.970.131.0811.16980.016
2.85Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802V11.5Light2.851.231.128.067.800.820.130.9710.43930.016
3.04Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802V12.5Light3.041.261.387.768.970.870.131.1610.91860.017
3.23Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802V13.5Light3.231.591.639.2110.011.080.151.099.97970.017
3.09Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802V14.5Light3.091.681.8010.1811.551.030.151.1312.581030.015
3.15Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802V15.5Light3.151.801.9710.7212.431.140.181.1611.611020.017
Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802V16.5Light1.280.210.8511.701090.017
3.28Emiliania huxleyi115104marinespecies.orgRCC 1216roscoff-culture-collection.orgDiplont (2N)19516:081.120.1134158.190238625212143802V17.5Light3.282.402.4113.7214.550.980.181.0615.301170.013