de.pangaea.dataset921026 und dataset PANGAEA
info@pangaea.de
https://www.pangaea.de/ information pointOfContact 2026-04-30T21:52:33Z https://doi.pangaea.de/10.1594/PANGAEA.921026 <gco:CharacterString>Eukaryotic microbial community at the LTER site Helgoland Roads from March 2016 to March 2019</gco:CharacterString> 2020-07-30T06:54:40 publication https://doi.org/10.1594/PANGAEA.921026 Käse, Laura https://orcid.org/0000-0003-0632-0729 information author Kraberg, Alexandra Claudia
Alexandra.Kraberg@awi.de
https://orcid.org/0000-0003-2571-2074 information author Metfies, Katja
Katja.Metfies@awi.de
author Neuhaus, Stefan https://orcid.org/0000-0001-8245-1486 information author Sprong, Pim
pim.sprong@awi.de
author Fuchs, Bernhard M
bfuchs@mpi-bremen.de
https://orcid.org/0000-0001-9828-1290 information author Boersma, Maarten
maarten.boersma@awi.de
https://orcid.org/0000-0003-1010-026X information author Wiltshire, Karen Helen
Karen.Wiltshire@awi.de
https://orcid.org/0000-0002-7148-0529 information author PANGAEA
info@pangaea.de
https://www.pangaea.de/ information publisher tableDigital Water samples were collected from the long-term ecological research (LTER) site at Helgoland and the eukaryotic microbial community was assessed. 18S V4 region was amplified using the primer set 528iF /964iR and amplicon sequencing was performed on an Illumina MiSeq™ sequencer in a 2 × 300 bp paired-end run. Sequence data have been deposited in the European Nucleotide Archive (ENA) at the European Bioinformatics Institute (EMBL-EBI) under accession number PRJEB37135 using the data brokerage service of the German Federation for Biological Data (GFBio). 21 million sequences remained after bioinformatic processing and were clustered into Operational Taxonomic Units (OTUs). The Protist Ribosomal Reference database (PR2), version 4.11.1 was used as reference database. completed Käse, Laura https://orcid.org/0000-0003-0632-0729 information principalInvestigator DNA barcoding eukaryotic plankton OTU Phytoplankton protists Zooplankton theme <gco:CharacterString>PANGAEA Keyword List</gco:CharacterString> 1995-01-01 creation PANGAEA
info@pangaea.de
https://www.pangaea.de/ information pointOfContact copyright copyright CC-BY-4.0: Creative Commons Attribution 4.0 International textTable und geoscientificInformation 7.9 7.9 54.188 54.188 Binary Object thematicClassification text/tab-separated-values unknown https://doi.pangaea.de/10.1594/PANGAEA.921026?format=textfile download dataset The data set was checked for completeness, correctness, and consistency of metainformation. Validity of used methods was checked and - if applicable - precision and range of data. EVENT LABEL: HelgolandRoads_site (Kabeltonne) * LATITUDE: 54.188000 * LONGITUDE: 7.900000 * ELEVATION: -10.0 m * DEIMS ID: https://deims.org/1e96ef9b-0915-4661-849f-b3a72f5aa9b1 * LOCATION: German Bight, North Sea Samples and Measurements were taken at HelgolandRoads site but independently of Helgoland Roads LTER project Related to <gco:CharacterString>Metabarcoding analysis suggests that flexible food web interactions in the eukaryotic plankton community are more common than specific predator-prey relationships at Helgoland Roads, North Sea</gco:CharacterString> 2021-01-01 publication https://doi.org/10.1093/icesjms/fsab058 Käse, Laura https://orcid.org/0000-0003-0632-0729 information author Metfies, Katja
Katja.Metfies@awi.de
author Kraberg, Alexandra Claudia
Alexandra.Kraberg@awi.de
https://orcid.org/0000-0003-2571-2074 information author Neuhaus, Stefan https://orcid.org/0000-0001-8245-1486 information author Meunier, Cédric Léo
Cedric.Meunier@awi.de
https://orcid.org/0000-0002-4070-4286 information author Wiltshire, Karen Helen
Karen.Wiltshire@awi.de
https://orcid.org/0000-0002-7148-0529 information author Boersma, Maarten
maarten.boersma@awi.de
https://orcid.org/0000-0003-1010-026X information author documentDigital ICES Journal of Marine Science fsab058 Related to <gco:CharacterString>Host-parasitoid associations in marine planktonic time series: Can metabarcoding help reveal them?</gco:CharacterString> 2021-01-01 publication https://doi.org/10.1371/journal.pone.0244817 Käse, Laura https://orcid.org/0000-0003-0632-0729 information author Metfies, Katja
Katja.Metfies@awi.de
author Neuhaus, Stefan https://orcid.org/0000-0001-8245-1486 information author Boersma, Maarten
maarten.boersma@awi.de
https://orcid.org/0000-0003-1010-026X information author Wiltshire, Karen Helen
Karen.Wiltshire@awi.de
https://orcid.org/0000-0002-7148-0529 information author Kraberg, Alexandra Claudia
Alexandra.Kraberg@awi.de
https://orcid.org/0000-0003-2571-2074 information author documentDigital PLoS ONE 16(1) e0244817 Further details <gco:CharacterString>Eukaryotic microbial community at the LTER site Helgoland Roads</gco:CharacterString> 2020-01-01 publication insdc:PRJEB37135 Neuhaus, Stefan https://orcid.org/0000-0001-8245-1486 information author Käse, Laura https://orcid.org/0000-0003-0632-0729 information author Kraberg, Alexandra Claudia
Alexandra.Kraberg@awi.de
https://orcid.org/0000-0003-2571-2074 information author Metfies, Katja
Katja.Metfies@awi.de
author Sprong, Pim
pim.sprong@awi.de
author Fuchs, Bernhard M
bfuchs@mpi-bremen.de
https://orcid.org/0000-0001-9828-1290 information author Boersma, Maarten
maarten.boersma@awi.de
https://orcid.org/0000-0003-1010-026X information author Wiltshire, Karen Helen
Karen.Wiltshire@awi.de
https://orcid.org/0000-0002-7148-0529 information author documentDigital European Nucleotide Archive (ENA)