Citation:

PANGAEA.920680

Name: Microsatellite marker data for 16 nuclear microsatellite loci from Dahurian larch (Larix gmelinii (Rupr.) Rupr.) individuals sampled in 2013 at region TY02 at the southern Taimyr Peninsula, north-central Siberia
Published: 2020-07-22
License: https://creativecommons.org/licenses/by/4.0/
Keywords: Krummholz; Larix; microsatellites; SSR; Treeline

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Abstract:

The table contains the biallelic data for 16 loci (LOCUS#: "K241", "K066", "K253", "K211","Ld101", "K260", "K056", "K224", "Ld45","K263", "K228", "K225", "K235", "K189", "Ld56", "Ld42") for 227 samples taken from Larix gmelinii individuals in a ~18 km² large region and exhaustively at the two sites TY02-VI and TY02-VII located ahead of the treeline at the southern Taimyr Peninsula, Russia.

This site is part of a dataset see related data at: doi:10.1594/PANGAEA.874612, doi:10.1594/PANGAEA.898948 and doi:10.1594/PANGAEA.885765.

Keyword(s):

Krummholz; Larix; microsatellites; SSR; Treeline

Supplement to:

Kruse, Stefan; Kolmogorov, Alexei; Pestryakova, Luidmila A; Herzschuh, Ulrike (accepted): Long-lived larch clones may conserve adaptations that could restrict treeline migration in northern Siberia. Ecology and Evolution

Related to:

Kruse, Stefan; Epp, Laura Saskia; Wieczorek, Mareike; Pestryakova, Luidmila A; Stoof-Leichsenring, Kathleen Rosmarie; Herzschuh, Ulrike (2018): Population genetics analyses of larch tree stands in north-central Siberia. PANGAEA, https://doi.org/10.1594/PANGAEA.885765

Kruse, Stefan; Gerdes, Alexander; Kath, Nadja J; Epp, Laura Saskia; Stoof-Leichsenring, Kathleen Rosmarie; Pestryakova, Luidmila A; Herzschuh, Ulrike (2019): Microsatellite marker data for 8 nuclear microsatellite loci from Dahurian larch (Larix gmelinii) individuals sampled at site TY04VI on the Taymyr Peninsula, north-central Siberia. PANGAEA, https://doi.org/10.1594/PANGAEA.898948

Wieczorek, Mareike; Kruse, Stefan; Epp, Laura Saskia; Kolmogorov, Alexei; Nikolaev, Anatoly N; Heinrich, Ingo; Jeltsch, Florian; Pestryakova, Luidmila A; Zibulski, Romy; Herzschuh, Ulrike (2017): Field data for larches growing in the Taimyr treeline ecotone. PANGAEA, https://doi.org/10.1594/PANGAEA.874612

Further details:

Kruse, Stefan; Epp, Laura Saskia; Wieczorek, Mareike; Pestryakova, Luidmila A; Stoof-Leichsenring, Kathleen Rosmarie; Herzschuh, Ulrike (2018): High gene flow and complex treeline dynamics of Larix Mill. stands on the Taymyr Peninsula (north-central Siberia) revealed by nuclear microsatellites. Tree Genetics & Genomes, 14(2), https://doi.org/10.1007/s11295-018-1235-3

Project(s):

Polar Terrestrial Environmental Systems @ AWI (AWI_Envi)

Coverage:

Median Latitude: 72.549002 * Median Longitude: 105.738981 * South-bound Latitude: 72.541040 * West-bound Longitude: 105.711706 * North-bound Latitude: 72.556617 * East-bound Longitude: 105.765110

Event(s):

Taymyr_Peninsula_TY02 (TY02) * Latitude: 72.549000 * Longitude: 105.745000 * Location: Taymyr peninsula, northern Siberia * Method/Device: Sampling by hand (HAND)

Comment:

TABLE DESCRIPTION

sample ID: unique name identifier based on individual names

site: Site name

crownWEradius.m: Crown radius in West-East direction (in m)

crownNSradius.m: Crown radius in North-South direction (in m)

krummholzcentre_UTM_48N.m: Krummholz centre position as Northings on UTM zone 48N (in m)

krummholzcentre_UTM_48E.m: Krummholz centre position as Eastings on UTM zone 48N (in m)

krummholzcrownWEradius.m: Krummholz radius in West-East direction (in m)

krummholzcrownNSradius.m: Krummholz radius in North-South direction (in m)

LOCUS#: biallelic allel fragmenth lengths for each of the sixteen loci (in bp)

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Comment
1	Sample ID	Sample ID		Kruse, Stefan
2	Site	Site		Kruse, Stefan
3	LATITUDE	Latitude		Kruse, Stefan	Geocode – WGS84
4	LONGITUDE	Longitude		Kruse, Stefan	Geocode – WGS84
5	UTM Easting, Universal Transverse Mercator	UTM east	m	Kruse, Stefan
6	UTM Northing, Universal Transverse Mercator	UTM north	m	Kruse, Stefan
7	UTM Zone, Universal Transverse Mercator	UTM Zone		Kruse, Stefan	sample position
8	Crown radius	Crown rad	m	Kruse, Stefan	crownWEradius.m
9	Crown radius	Crown rad	m	Kruse, Stefan	crownNSradius.m
10	UTM Northing, Universal Transverse Mercator	UTM north	m	Kruse, Stefan
11	UTM Easting, Universal Transverse Mercator	UTM east	m	Kruse, Stefan
12	Crown radius	Crown rad	m	Kruse, Stefan	krummholzcrownWEradius.m
13	Crown radius	Crown rad	m	Kruse, Stefan	krummholzcrownNSradius.m
14	Allele fragment length	AFL	bp	Kruse, Stefan	K241
15	Allele fragment length	AFL	bp	Kruse, Stefan	K241.1
16	Allele fragment length	AFL	bp	Kruse, Stefan	K066
17	Allele fragment length	AFL	bp	Kruse, Stefan	K066.1
18	Allele fragment length	AFL	bp	Kruse, Stefan	K253
19	Allele fragment length	AFL	bp	Kruse, Stefan	K253.1
20	Allele fragment length	AFL	bp	Kruse, Stefan	K211
21	Allele fragment length	AFL	bp	Kruse, Stefan	K211.1
22	Allele fragment length	AFL	bp	Kruse, Stefan	Ld101
23	Allele fragment length	AFL	bp	Kruse, Stefan	Ld101.1
24	Allele fragment length	AFL	bp	Kruse, Stefan	K260
25	Allele fragment length	AFL	bp	Kruse, Stefan	K260.1
26	Allele fragment length	AFL	bp	Kruse, Stefan	K056
27	Allele fragment length	AFL	bp	Kruse, Stefan	K056.1
28	Allele fragment length	AFL	bp	Kruse, Stefan	K224
29	Allele fragment length	AFL	bp	Kruse, Stefan	K224.1
30	Allele fragment length	AFL	bp	Kruse, Stefan	Ld45
31	Allele fragment length	AFL	bp	Kruse, Stefan	Ld45.1
32	Allele fragment length	AFL	bp	Kruse, Stefan	K263
33	Allele fragment length	AFL	bp	Kruse, Stefan	K263.1
34	Allele fragment length	AFL	bp	Kruse, Stefan	K228
35	Allele fragment length	AFL	bp	Kruse, Stefan	K228.1
36	Allele fragment length	AFL	bp	Kruse, Stefan	K225
37	Allele fragment length	AFL	bp	Kruse, Stefan	K225.1
38	Allele fragment length	AFL	bp	Kruse, Stefan	K235
39	Allele fragment length	AFL	bp	Kruse, Stefan	K235.1
40	Allele fragment length	AFL	bp	Kruse, Stefan	K189
41	Allele fragment length	AFL	bp	Kruse, Stefan	K189.1
42	Allele fragment length	AFL	bp	Kruse, Stefan	Ld56
43	Allele fragment length	AFL	bp	Kruse, Stefan	Ld56.1
44	Allele fragment length	AFL	bp	Kruse, Stefan	Ld42
45	Allele fragment length	AFL	bp	Kruse, Stefan	Ld42.1

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Size:

8787 data points

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