Citation:

PANGAEA.920033

Name: Seawater carbonate chemistry and the production of DMSP and DMS in the culture of Amphidinium carterae
Published: 2020-07-13
License: https://creativecommons.org/licenses/by/4.0/
Keywords: Amphidinium carterae; Bottles or small containers/Aquaria (<20 L); Chromista; Laboratory experiment; Laboratory strains; Myzozoa; Not applicable; Other metabolic rates; Pelagos; Phytoplankton; Single species; Temperature

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Abstract:

Ocean acidification and global warming might affect the production of dimethylsulfoniopropionate (DMSP), dimethylsulfide (DMS), and dissolved acrylic acid (AAd) by marine phytoplankton. Monoculture incubation experiments were conducted with the dinoflagellate Amphidinium carterae to investigate the effects of elevated CO2 concentration and temperature on growth and productions of DMSP, DMS, and AAd. Two pCO2 levels were set as 400 and 1000 μatm, and two temperatures were set as 20 and 23 °C. The growth of A. carterae remained unaffected by an increase of CO2 to 1000 μatm and a rise of temperature of 3 °C. Moreover, the elevated CO2 concentration and temperature had no significant effects on the concentrations and cell-normalized concentrations of DMSP, DMS, and AAd. No additive or synergistic effects of elevated CO2 concentration and temperature on A. carterae were observed, indicating that A. carterae was insensitive to elevated CO2 and temperature in short time incubation.

Keyword(s):

Amphidinium carterae; Bottles or small containers/Aquaria (<20 L); Chromista; Laboratory experiment; Laboratory strains; Myzozoa; Not applicable; Other metabolic rates; Pelagos; Phytoplankton; Single species; Temperature

Supplement to:

Li, Pei-Feng; Yang, Gui-Peng; Liu, Chun-Ying (2020): Combined effects of elevated temperature and pCO2 on the production of DMSP and DMS in the culture of Amphidinium carterae. Journal of Applied Phycology, 32(2), 1063-1074, https://doi.org/10.1007/s10811-020-02058-8

Further details:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-07-07.

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Type	Type		Yang, Gui-Peng		study
2	Species	Species		Yang, Gui-Peng
3	Registration number of species	Reg spec no		Yang, Gui-Peng
4	Uniform resource locator/link to reference	URL ref		Yang, Gui-Peng		WoRMS Aphia ID
5	Experiment duration	Exp duration	days	Yang, Gui-Peng
6	Treatment	Treat		Yang, Gui-Peng
7	Cell density	Cells	#/ml	Yang, Gui-Peng
8	Cell density, standard deviation	Cells std dev	±	Yang, Gui-Peng
9	Dimethylsulfoniopropionate, particulate	DMSP part	nmol/l	Yang, Gui-Peng
10	Dimethylsulfoniopropionate, particulate, standard deviation	DMSPp std dev	±	Yang, Gui-Peng
11	Dimethylsulfoniopropionate, particulate, per cell	DMSPp/cell	fmol/#	Yang, Gui-Peng
12	Dimethylsulfoniopropionate, particulate, per cell, standard deviation	DMSPp/cell std dev	±	Yang, Gui-Peng
13	Dimethylsulfoniopropionate, dissolved	DMSP diss	nmol/l	Yang, Gui-Peng
14	Dimethylsulfoniopropionate, dissolved, standard deviation	DMSPd std dev	±	Yang, Gui-Peng
15	Dimethylsulfoniopropionate, dissolved, per cell	DMSPd/cell	fmol/#	Yang, Gui-Peng
16	Dimethylsulfoniopropionate, dissolved, per cell, standard deviation	DMSPd/cell std dev	±	Yang, Gui-Peng
17	Dimethyl sulfide	DMS	nmol/l	Yang, Gui-Peng
18	Dimethyl sulfide, standard deviation	DMS std dev	±	Yang, Gui-Peng
19	Dimethyl sulfide per cell	DMS/cell	fmol/#	Yang, Gui-Peng
20	Dimethyl sulfide per cell, standard deviation	DMS/cell std dev	±	Yang, Gui-Peng
21	Acrylic acid, dissolved	AAd	nmol/l	Yang, Gui-Peng
22	Acrylic acid, dissolved, standard deviation	AAd std dev	±	Yang, Gui-Peng
23	Acrylic acid, dissolved per cell	AAd /cell	fmol/#	Yang, Gui-Peng
24	Acrylic acid, dissolved per cell, standard deviation	AAd /cell std dev	±	Yang, Gui-Peng
25	Temperature, water	Temp	°C	Yang, Gui-Peng
26	Salinity	Sal		Yang, Gui-Peng
27	pH	pH		Yang, Gui-Peng		NBS scale
28	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Gui-Peng
29	Alkalinity, total	AT	µmol/kg	Yang, Gui-Peng
30	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Gui-Peng
31	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
32	pH	pH		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	total scale
33	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
34	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
35	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
36	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
37	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
38	Alkalinity, total	AT	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
39	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
40	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

1120 data points

Data

Download dataset as tab-delimited text — use the following character encoding:

1 Type (study)	2 Species	3 Reg spec no	4 URL ref (WoRMS Aphia ID)	5 Exp duration [days]	6 Treat	7 Cells [#/ml]	8 Cells std dev [±]	9 DMSP part [nmol/l]	10 DMSPp std dev [±]	11 DMSPp/cell [fmol/#]	12 DMSPp/cell std dev [±]	13 DMSP diss [nmol/l]	14 DMSPd std dev [±]	15 DMSPd/cell [fmol/#]	16 DMSPd/cell std dev [±]	17 DMS [nmol/l]	18 DMS std dev [±]	19 DMS/cell [fmol/#]	20 DMS/cell std dev [±]	21 AAd [nmol/l]	22 AAd std dev [±]	23 AAd /cell [fmol/#]	24 AAd /cell std dev [±]	25 Temp [°C]	26 Sal	27 pH (NBS scale)	28 DIC [µmol/kg]	29 AT [µmol/kg]	30 pCO2water_SST_wet [µatm]	31 CSC flag	32 pH (total scale)	33 CO2 [µmol/kg]	34 fCO2water_SST_wet [µatm]	35 pCO2water_SST_wet [µatm]	36 [HCO3]- [µmol/kg]	37 [CO3]2- [µmol/kg]	38 AT [µmol/kg]	39 Omega Arg	40 Omega Cal
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	4	400	12583.30	1514.60	27.47	2.85	2.18	0.63	35.43	2.85	2.82	0.63	19.66	3.12	1.56	0.29	3.15	0.13	0.25	0.03	25.00	30.00	8.180000305	1972	2241	404	27	8.04	11.98	411.20	412.52	1774.44	185.58	2224.41	3.03	4.65
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	5	400	21666.70	1924.50	35.68	1.79	1.65	0.31	36.00	0.22	1.66	0.04	22.57	2.78	1.04	0.48	4.48	0.34	0.21	0.06	25.00	30.00	8.180000305	1966	2235	403	27	8.04	11.93	409.28	410.59	1768.81	185.27	2218.25	3.02	4.64
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	6	400	16875.00	3427.50	27.04	1.52	1.60	0.15	36.42	0.21	2.16	0.02	27.10	2.98	1.61	0.29	14.49	3.03	0.86	0.29	25.00	30.00	8.130000114	1981	2223	460	27	7.99	13.62	467.25	468.75	1799.43	167.95	2207.13	2.74	4.21
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	7	400	23125.00	5985.10	27.91	1.78	1.21	0.10	33.52	2.54	1.45	0.14	24.55	1.28	1.06	0.07	4.98	0.35	0.22	0.02	25.00	30.00	8.100000381	1990	2216	498	27	7.96	14.74	505.83	507.45	1817.06	158.20	2201.21	2.58	3.96
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	8	400	23333.30	3319.40	26.59	0.48	1.14	0.05	33.78	3.65	1.45	0.37	26.94	0.53	1.15	0.05	3.95	0.29	0.17	0.03	25.00	30.00	8.149999619	1978	2231	437	27	8.01	12.92	443.53	444.95	1789.99	175.08	2214.78	2.86	4.39
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	9	400	9166.70	1551.60	43.41	1.93	4.74	0.42	31.59	3.66	3.45	0.79	27.20	0.01	2.97	0.00	3.18	0.43	0.35	0.09	25.00	30.00	8.149999619	1985	2239	439	27	8.01	12.95	444.50	445.92	1796.14	175.90	2222.65	2.87	4.41
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	10	400	4583.30	819.30	27.70	0.48	6.04	0.20	17.38	0.73	3.79	0.30	30.27	0.17	6.61	0.07	5.77	0.65	1.26	0.26	25.00	30.00	8.109999657	1954	2183	477	27	7.97	14.12	484.57	486.13	1781.20	158.68	2167.63	2.59	3.98
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	4	400+ T	6666.70	481.10	27.25	2.53	4.09	0.75	30.01	3.50	4.50	0.43	14.65	3.86	2.20	0.37	15.22	0.38	2.28	0.03	25.00	30.00	8.200000000	1992	2264	408	27	8.06	11.48	393.86	395.12	1784.56	195.97	2258.47	3.20	4.91
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	5	400+ T	29166.70	2926.60	42.26	4.41	1.45	0.50	39.74	1.13	1.36	0.13	22.47	1.69	0.77	0.22	23.45	1.82	0.80	0.21	25.00	30.00	8.110000000	1990	2227	474	27	7.97	14.38	493.49	495.07	1814.01	161.61	2206.30	2.64	4.05
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	6	400+ T	22500.00	1863.40	34.76	4.15	1.54	0.74	37.42	2.70	1.66	0.48	27.03	1.95	1.20	0.35	25.19	3.54	1.12	0.33	25.00	30.00	8.110000000	1968	2203	469	27	7.97	14.24	488.65	490.22	1794.11	159.65	2182.41	2.60	4.00
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	7	400+ T	15833.30	962.30	29.44	5.20	1.86	0.80	35.04	0.12	2.21	0.04	28.78	2.10	1.82	0.73	5.99	0.35	0.38	0.12	25.00	30.00	8.090000000	1971	2201	481	27	7.95	14.96	513.55	515.20	1802.67	153.36	2175.85	2.50	3.84
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	8	400+ T	10000.00	1581.10	25.84	0.02	2.58	0.00	41.72	0.01	4.17	0.00	32.01	0.65	3.20	0.14	5.36	0.21	0.54	0.04	25.00	30.00	8.140000000	2008	2253	467	27	8.00	13.43	460.83	462.31	1820.31	174.26	2242.15	2.84	4.37
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	9	400+ T	10416.70	1226.60	43.18	9.83	4.15	0.67	32.34	0.95	3.11	0.26	26.71	0.68	2.56	0.18	2.45	0.00	0.23	0.00	25.00	30.00	8.130000000	1969	2210	458	27	7.99	13.52	463.80	465.28	1788.36	167.13	2194.48	2.73	4.19
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	10	400+ T	3750.00	1020.60	24.93	2.64	6.65	0.86	11.86	1.23	3.16	0.40	37.03	0.64	9.87	0.21	9.66	2.18	2.58	0.11	25.00	30.00	8.090000000	1991	2222	486	27	7.95	15.13	519.26	520.92	1821.08	154.79	2197.06	2.52	3.88
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	4	1000	8333.30	1272.90	26.67	5.01	3.20	0.31	31.39	4.00	3.77	1.05	18.43	1.63	2.21	0.43	20.53	8.79	2.46	0.30	25.00	30.00	7.820000000	2035	2141	1004	27	7.68	29.67	1018.25	1021.52	1917.79	87.54	2131.38	1.43	2.19
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	5	1000	11666.70	2097.20	27.27	1.99	2.34	0.32	40.39	2.63	3.46	0.42	20.69	3.26	1.77	0.52	5.75	0.06	0.49	0.01	25.00	30.00	7.790000000	2055	2151	1089	27	7.65	32.02	1098.90	1102.42	1939.97	83.00	2142.29	1.35	2.08
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	6	1000	29000.00	2081.70	31.26	1.61	1.08	0.26	32.13	0.36	1.11	0.06	24.86	1.02	0.86	0.16	55.72	0.45	1.92	0.07	25.00	30.00	7.810000000	2081	2184	1051	27	7.67	31.13	1068.32	1071.75	1962.50	87.37	2174.89	1.43	2.19
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	7	1000	20000.00	5464.50	33.38	2.47	1.67	0.15	31.38	3.11	1.57	0.19	24.45	0.44	1.22	0.03	7.38	3.48	0.37	0.21	25.00	30.00	7.800000000	2034	2133	1053	27	7.66	30.96	1062.54	1065.94	1919.04	84.00	2124.11	1.37	2.10
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	8	1000	14583.30	1930.50	35.36	0.51	2.42	0.09	34.53	4.50	2.37	0.78	26.07	0.48	1.79	0.08	14.51	1.77	1.00	0.31	25.00	30.00	7.810000000	2085	2189	1054	27	7.67	31.09	1067.03	1070.45	1966.11	87.80	2179.46	1.43	2.20
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	9	1000	11666.70	2453.30	40.30	2.24	3.45	0.30	38.52	4.09	3.30	1.10	26.75	1.30	2.29	0.18	3.56	0.32	0.31	0.04	25.00	30.00	7.790000000	2066	2162	1095	27	7.65	32.21	1105.42	1108.96	1950.39	83.40	2153.48	1.36	2.09
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	10	1000	11666.70	1360.80	40.92	6.81	3.51	0.67	26.15	0.25	2.24	0.06	32.45	1.72	2.78	0.42	6.31	0.88	0.54	0.22	25.00	30.00	7.780000000	2064	2156	1120	27	7.64	33.05	1134.16	1137.79	1949.72	81.23	2147.62	1.32	2.04
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	4	1000+T	6666.70	1734.70	31.18	4.44	4.68	0.85	33.82	3.46	5.07	0.67	16.23	0.20	2.43	0.04	3.02	0.31	0.45	0.06	25.00	30.00	7.820000000	2157	2267	1065	27	7.68	31.33	1075.08	1078.52	2032.54	93.13	2257.45	1.52	2.33
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	5	1000+T	18333.30	1734.70	27.68	1.08	1.51	0.21	30.08	0.35	1.64	0.07	24.46	2.77	1.33	0.53	8.53	1.90	0.47	0.37	25.00	30.00	7.790000000	2140	2238	1134	27	7.65	33.45	1148.06	1151.74	2020.37	86.17	2228.92	1.41	2.16
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	6	1000+T	34166.70	3367.90	29.26	4.82	0.86	0.48	37.36	0.14	1.09	0.01	25.48	3.88	0.75	0.38	21.60	0.59	2.66	0.06	25.00	30.00	7.810000000	2135	2240	1079	27	7.67	31.89	1094.44	1097.95	2013.34	89.76	2230.57	1.46	2.25
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	7	1000+T	27500.00	1443.40	30.87	1.89	1.12	0.44	30.32	1.77	1.10	0.41	22.75	1.34	0.83	0.31	22.62	0.96	2.28	0.22	25.00	30.00	7.820000000	2172	2282	1072	27	7.68	31.72	1088.68	1092.17	2046.99	93.28	2272.01	1.52	2.34
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	8	1000+T	14166.70	4238.30	34.29	3.15	2.42	0.25	33.77	0.39	2.38	0.03	28.30	3.82	2.00	0.54	9.99	0.56	0.70	0.04	25.00	30.00	7.830000000	2154	2267	1038	27	7.69	30.68	1052.94	1056.32	2028.60	94.72	2257.35	1.54	2.37
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	9	1000+T	18333.30	2965.90	46.26	1.67	2.52	0.19	26.18	0.14	1.43	0.02	28.48	3.72	1.55	0.42	12.00	4.89	0.65	0.55	25.00	30.00	7.810000000	2124	2229	1073	27	7.67	31.62	1085.19	1088.66	2002.79	89.58	2219.77	1.46	2.24
laboratory	Amphidinium carterae (phytoplankton)	109723	marinespecies.org	10	1000+T	9166.70	1138.60	33.69	0.38	3.68	0.11	20.73	0.19	2.26	0.06	30.89	3.06	3.37	0.27	5.81	0.67	0.63	0.20	25.00	30.00	7.820000000	2131	2240	1052	27	7.68	30.93	1061.31	1064.71	2008.00	92.08	2230.82	1.50	2.31