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Morrell, Brooke K; Gobler, Christopher J (2020): Seawater carbonate chemistry and hatch time, hatch success, survival, and length of estuarine fishes [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.918928

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Abstract:
Estuaries serve as important nursery habitats for various species of early-life stage fish, but can experience cooccurring acidification and hypoxia that can vary diurnally in intensity. This study examines the effects of acidification (pH 7.2–7.4) and hypoxia (dissolved oxygen (DO) ~ 2–4 mg/L) as individual and combined stressors on four fitness metrics for three species of forage fish endemic to the U.S. East Coast: Menidia menidia, Menidia beryllina, and Cyprinodon variegatus. Additionally, the impacts of various durations of exposure to these two stressors was also assessed to explore the sensitivity threshold for larval fishes under environmentally-representative conditions. C. variegatus was resistant to chronic low pH, while M. menidia and M. beryllina experienced significantly reduced survival and hatch time, respectively. Exposure to hypoxia resulted in reduced hatch success of both Menidia species, as well as diminished survival of M. beryllina larvae. Diurnal exposure to low pH and low DO for 4 or 8 h did not alter survival of M. beryllina, although 8 or 12 h of daily exposure through the 10 days posthatch significantly depressed larval size. In contrast, M. menidia experienced significant declines in survival for all intervals of diel cycling hypoxia and acidification (4–12 h). Exposure to 12-h diurnal hypoxia generally elicited negative effects equal to, or of greater severity, than chronic exposure to low DO at the same levels despite significantly higher mean DO exposure concentrations. This evidences a substantial biological cost to adapting to changing DO levels, and implicates diurnal cycling of DO as a significant threat to fish larvae in estuaries. Larval responses to hypoxia, and to a lesser extent acidification, in this study on both continuous and diurnal timescales indicate that estuarine conditions throughout the spawning and postspawn periods could adversely affect stocks of these fish, with diverse implications for the remainder of the food web.
Keyword(s):
Animalia; Brackish waters; Chordata; Containers and aquaria (20-1000 L or < 1 m**2); Cyprinodon variegatus; Growth/Morphology; Laboratory experiment; Menidia beryllina; Menidia menidia; Mortality/Survival; Nekton; North Atlantic; Other; Oxygen; Pelagos; Reproduction; Single species; Temperate
Supplement to:
Morrell, Brooke K; Gobler, Christopher J (2020): Negative Effects of Diurnal Changes in Acidification and Hypoxia on Early-Life Stage Estuarine Fishes. Diversity, 12(1), 25, https://doi.org/10.3390/d12010025
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-06-12.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TypeTypeGobler, Christopher Jstudy
SpeciesSpeciesGobler, Christopher J
Registration number of speciesReg spec noGobler, Christopher J
Uniform resource locator/link to referenceURL refGobler, Christopher JWoRMS Aphia ID
ExperimentExpGobler, Christopher J
TreatmentTreatGobler, Christopher J
Hatching timeHatching timedaysGobler, Christopher J
Hatching time, standard errorHatching time std e±Gobler, Christopher J
Egg hatching successEgg hatch success%Gobler, Christopher J
10 Egg hatching success, standard errorEgg hatch success std e±Gobler, Christopher J
11 SurvivalSurvival%Gobler, Christopher J
12 Survival rate, standard errorSurvival rate std e±Gobler, Christopher J
13 LengthlmmGobler, Christopher J
14 Length, standard errorl std e±Gobler, Christopher J
15 pHpHGobler, Christopher JPotentiometrictotal scale
16 pH, standard deviationpH std dev±Gobler, Christopher JPotentiometrictotal scale
17 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmGobler, Christopher JCalculated using CO2SYS
18 Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Gobler, Christopher JCalculated using CO2SYS
19 Calcite saturation stateOmega CalGobler, Christopher JCalculated using CO2SYS
20 Calcite saturation state, standard deviationOmega Cal std dev±Gobler, Christopher JCalculated using CO2SYS
21 Aragonite saturation stateOmega ArgGobler, Christopher JCalculated using CO2SYS
22 Aragonite saturation state, standard deviationOmega Arg std dev±Gobler, Christopher JCalculated using CO2SYS
23 Carbon, inorganic, dissolvedDICµmol/lGobler, Christopher J
24 Carbon, inorganic, dissolved, standard deviationDIC std dev±Gobler, Christopher J
25 Carbonate ion[CO3]2-µmol/lGobler, Christopher JCalculated using CO2SYS
26 Carbonate ion, standard deviation[CO3]2- std dev±Gobler, Christopher JCalculated using CO2SYS
27 Alkalinity, totalATµmol/lGobler, Christopher JCalculated using CO2SYS
28 Alkalinity, total, standard deviationAT std dev±Gobler, Christopher JCalculated using CO2SYS
29 SalinitySalGobler, Christopher J
30 Salinity, standard deviationSal std dev±Gobler, Christopher J
31 Oxygen, dissolvedDOmg/lGobler, Christopher J
32 Oxygen, dissolved, standard deviationDO std dev±Gobler, Christopher J
33 Temperature, waterTemp°CGobler, Christopher J
34 Temperature, water, standard deviationTemp std dev±Gobler, Christopher J
35 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37 Carbon dioxide, standard deviationCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
38 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39 Fugacity of carbon dioxide in seawater, standard deviationfCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
40 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41 Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
42 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
43 Bicarbonate ion, standard deviation[HCO3]- std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
44 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45 Carbonate ion, standard deviation[CO3]2- std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
46 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
47 Carbon, inorganic, dissolved, standard deviationDIC std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
48 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
49 Aragonite saturation state, standard deviationOmega Arg std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
50 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
51 Calcite saturation state, standard deviationOmega Cal std dev±Yang, YanCalculated using seacarb after Orr et al. (2018)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1676 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Type
(study)

Species

Reg spec no

URL ref
(WoRMS Aphia ID)

Exp

Treat

Hatching time [days]

Hatching time std e [±]

Egg hatch success [%]
10 
Egg hatch success std e [±]
11 
Survival [%]
12 
Survival rate std e [±]
13 
l [mm]
14 
l std e [±]
15 
pH
(total scale, Potentiometric)
16 
pH std dev [±]
(total scale, Potentiometric)
17 
pCO2water_SST_wet [µatm]
(Calculated using CO2SYS)
18 
pCO2 std dev [±]
(Calculated using CO2SYS)
19 
Omega Cal
(Calculated using CO2SYS)
20 
Omega Cal std dev [±]
(Calculated using CO2SYS)
21 
Omega Arg
(Calculated using CO2SYS)
22 
Omega Arg std dev [±]
(Calculated using CO2SYS)
23 
DIC [µmol/l]
24 
DIC std dev [±]
25 
[CO3]2- [µmol/l]
(Calculated using CO2SYS)
26 
[CO3]2- std dev [±]
(Calculated using CO2SYS)
27 
AT [µmol/l]
(Calculated using CO2SYS)
28 
AT std dev [±]
(Calculated using CO2SYS)
29 
Sal
30 
Sal std dev [±]
31 
DO [mg/l]
32 
DO std dev [±]
33 
Temp [°C]
34 
Temp std dev [±]
35 
CSC flag
(Calculated using seacarb afte...)
36 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
37 
CO2 std dev [±]
(Calculated using seacarb afte...)
38 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
39 
fCO2 std dev [±]
(Calculated using seacarb afte...)
40 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
41 
pCO2 std dev [±]
(Calculated using seacarb afte...)
42 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
43 
[HCO3]- std dev [±]
(Calculated using seacarb afte...)
44 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
45 
[CO3]2- std dev [±]
(Calculated using seacarb afte...)
46 
DIC [µmol/kg]
(Calculated using seacarb afte...)
47 
DIC std dev [±]
(Calculated using seacarb afte...)
48 
Omega Arg
(Calculated using seacarb afte...)
49 
Omega Arg std dev [±]
(Calculated using seacarb afte...)
50 
Omega Cal
(Calculated using seacarb afte...)
51 
Omega Cal std dev [±]
(Calculated using seacarb afte...)
laboratoryMenidia menidia (fish)159228marinespecies.org1Control10.80.399.73.340.210.36.70.17.850.05407731.660.341.100.2611771106815128312428.50.0218.560.2823.20.4811.831.98384.4864.09385.7464.301078.70110.0265.879.531156.40117.011.070.161.660.25
laboratoryMenidia menidia (fish)159228marinespecies.org1Diurnal DO9.00.055.99.135.88.37.50.37.850.06442411.680.181.100.1512426868813467528.50.0166.082.1123.20.4812.442.11404.1268.33405.4468.551133.8069.4669.249.421215.4772.191.130.161.750.25
laboratoryMenidia menidia (fish)159228marinespecies.org1Low DO11.50.957.212.420.87.47.10.47.840.06406301.820.261.200.22124482741213589528.50.090.240.4523.20.4812.882.25418.7172.97420.0873.211148.0186.3168.519.811229.4090.661.110.171.730.26
laboratoryMenidia menidia (fish)159228marinespecies.org1Diurnal pH8.80.395.02.417.67.37.50.47.500.2114128300.830.630.600.44124834342612647528.50.0215.040.2123.20.4828.3414.77920.96479.95923.98481.521154.1879.9731.4814.331214.0083.370.510.230.790.36
laboratoryMenidia menidia (fish)159228marinespecies.org1Low pH9.30.397.52.232.714.57.50.37.200.8822554200.380.040.300.0313293316212872228.50.0216.640.2823.20.4859.66125.261938.804070.461945.164083.831217.7791.4216.6532.521294.08183.070.270.530.420.82
laboratoryMenidia menidia (fish)159228marinespecies.org1Diurnal pH/DO10.30.345.014.318.311.97.50.47.550.199386701.170.640.800.44125797472713109628.50.0165.762.1823.20.4825.9812.40844.13403.00846.89404.321186.9797.4136.3314.971249.27100.720.590.240.920.38
laboratoryMenidia menidia (fish)159228marinespecies.org1Low pH/DO11.00.048.811.31.61.67.250.0719351240.490.130.300.071379129205135413828.50.077.440.6423.20.4855.7311.011810.91357.681816.85358.851276.23131.6619.583.711351.53139.920.320.060.490.10
laboratoryCyprinodon variegatus (fish)159285marinespecies.org2Control9.00.468.81.393.91.98.60.47.670.15528961.510.241.000.1612661966110135720131.92.1216.960.5422.81.0819.167.91627.18258.46629.24259.311186.68186.3851.4317.851257.26195.090.820.291.260.44
laboratoryCyprinodon variegatus (fish)159285marinespecies.org2Diurnal DO14.00.772.22.982.210.78.70.57.720.118767351.290.440.800.291303124521813689031.92.1164.161.8922.81.0817.004.98556.38162.41558.21162.951181.1787.9857.4413.661255.6089.740.920.221.410.34
laboratoryCyprinodon variegatus (fish)159285marinespecies.org2Low DO14.50.966.91.589.32.68.20.77.740.075191131.650.201.100.131301146668140014531.92.187.680.4422.81.0816.533.51541.18114.22542.96114.591203.04131.1661.2611.211280.83138.400.980.191.510.28
laboratoryCyprinodon variegatus (fish)159285marinespecies.org2Diurnal pH12.31.871.91.189.11.58.60.57.370.2316829680.790.560.500.3713431203223134814331.92.1211.200.6122.81.0840.1122.881312.97748.581317.30751.051245.07139.2727.0413.881312.22148.780.430.220.660.34
laboratoryCyprinodon variegatus (fish)159285marinespecies.org2Low pH14.00.076.32.087.53.38.40.57.080.12215210010.680.600.400.391424812724140512931.92.1212.480.6122.81.0883.8425.192744.87822.682753.92825.401334.94124.0114.874.281433.66136.200.240.070.370.11
laboratoryCyprinodon variegatus (fish)159285marinespecies.org2Diurnal pH/DO13.50.370.92.693.11.78.00.67.460.21158213360.930.580.600.3813541833823137215031.92.1182.721.9022.81.0832.7617.341072.60567.231076.13569.101251.35145.4533.4415.601317.55153.030.530.250.820.39
laboratoryCyprinodon variegatus (fish)159285marinespecies.org2Low pH/DO15.00.659.44.493.16.37.50.57.170.0716526580.790.440.500.28147265321814755131.92.173.280.4922.81.0871.1012.282327.51399.252335.19400.571392.6249.2919.093.181482.8054.500.310.050.470.08
laboratoryMenidia beryllina (fish)159227marinespecies.org3Control12.50.382.52.278.73.47.10.37.780.063131112.020.051.300.031140198822128418331.70.3221.120.1422.80.5813.662.96446.7296.75448.1997.071087.89162.5860.4411.701161.99172.920.970.191.490.30
laboratoryMenidia beryllina (fish)159227marinespecies.org3Diurnal DO9.01.144.48.169.015.17.00.47.800.044281401.940.361.300.241260111791513888531.70.3202.881.3522.80.5814.061.75459.6756.98461.1857.171172.2076.2068.197.331254.4480.581.090.131.680.20
laboratoryMenidia beryllina (fish)159227marinespecies.org3Low DO10.51.233.112.321.810.47.00.47.830.053171302.080.091.400.061158212854130519131.70.367.520.3322.80.5812.182.48398.3580.82399.6681.091088.48167.3867.8512.531168.51179.031.090.211.670.32
laboratoryMenidia beryllina (fish)159227marinespecies.org3Diurnal pH10.31.062.57.184.35.07.20.37.620.167422451.480.521.000.34139345602114743831.70.3203.841.3622.80.5823.749.60776.28313.85778.84314.881307.9057.0950.2716.931381.9152.790.800.271.240.42
laboratoryMenidia beryllina (fish)159227marinespecies.org3Low pH7.30.377.54.498.80.87.50.27.190.1628854620.380.060.200.0414643815314052531.70.3216.960.2522.80.5864.6824.792115.39810.342122.37813.011324.1830.0518.916.751407.7744.280.300.110.470.17
laboratoryMenidia beryllina (fish)159227marinespecies.org3Diurnal pH/DO11.30.841.66.151.911.27.20.57.660.095691861.470.391.000.2512621126016135211731.70.3204.801.2022.80.5819.634.84641.99158.10644.10158.621186.00108.7849.9810.451255.61113.800.800.171.230.26
laboratoryMenidia beryllina (fish)159227marinespecies.org3Low pH/DO8.30.527.813.726.419.87.50.47.270.1323768860.330.040.200.021255311132120828431.70.378.080.5622.80.5845.8218.061498.52590.511503.46592.461127.76269.2619.367.241192.95285.400.310.120.480.18
laboratoryMenidia beryllina (fish)159227marinespecies.org4Control10.00.087.82.272.32.67.00.17.890.07357572.220.541.500.31128659941814378331.80.6218.560.2623.20.6811.352.26375.1974.39376.4174.631174.6877.8885.5412.961271.5779.991.370.222.110.33
laboratoryMenidia beryllina (fish)159227marinespecies.org4Diurnal pH/DO9.30.547.514.045.418.16.60.17.560.256202381.610.841.100.5413301326833142717231.80.6142.082.3923.20.6826.4116.82873.38556.14876.24557.961279.02169.6043.5623.631349.00175.460.700.381.070.58
laboratoryMenidia beryllina (fish)159227marinespecies.org4Reduced pH/DO8.80.580.60.872.04.67.70.17.430.0812713710.880.050.600.051480159384150514331.80.6153.920.2223.20.6838.458.441271.52278.621275.69279.531380.38134.2734.857.021453.68141.460.560.120.860.18
laboratoryMenidia beryllina (fish)159227marinespecies.org4Low pH/DO9.30.342.57.944.64.76.50.27.160.0723684070.400.030.300.011399130171135811731.80.679.040.3323.20.6866.5012.602198.85415.922206.06417.281281.95111.7817.383.171365.83119.880.280.050.430.08
laboratoryMenidia beryllina (fish)159227marinespecies.org5Control9.30.384.28.870.89.68.00.17.940.0346633.160.092.040.07178938127619684829.61.6225.280.5822.50.4814.511.25465.5639.98467.1040.121624.6045.36122.378.721761.4846.121.970.173.060.26
laboratoryMenidia beryllina (fish)159227marinespecies.org54 h Diurnal pH/DO9.00.076.73.057.26.47.40.1148312152.001.231.290.7918931118150196954
laboratoryMenidia beryllina (fish)159227marinespecies.org58 h Diurnal pH/DO9.70.377.92.950.96.06.60.1170912791.831.241.180.8019151137350197354
laboratoryMenidia beryllina (fish)159227marinespecies.org512 h Diurnal pH/DO8.70.354.61.834.22.86.80.1171812601.771.181.140.7619171097147197248
laboratoryMenidia beryllina (fish)159227marinespecies.orgControl8.80.378.47.971.25.66.20.17.900.03506482.760.371.780.241728331101518805528.00.9226.240.7522.81.6815.691.50503.0743.50504.7243.641582.6452.20105.449.401703.7653.141.710.182.670.27
laboratoryMenidia beryllina (fish)159227marinespecies.org4 h Diurnal pH/DO9.00.469.411.866.84.46.40.1154312531.741.091.120.701806105694318645228.00.922.81.6
laboratoryMenidia beryllina (fish)159227marinespecies.org8 h Diurnal pH/DO9.00.470.311.550.66.66.00.1174113061.651.161.060.751831115664618775228.00.922.81.6
laboratoryMenidia beryllina (fish)159227marinespecies.org12 h Diurnal pH/DO9.00.458.86.631.010.56.00.1173312741.611.101.040.711833113644418765728.00.922.81.6
laboratoryMenidia menidia (fish)159228marinespecies.orgControl7.50.390.65.129.08.55.20.17.930.02526392.620.211.690.13172015104818642629.60.8224.000.1022.40.2814.130.82452.0226.29453.5126.381542.4225.86113.125.841669.6625.501.820.132.830.20
laboratoryMenidia menidia (fish)159228marinespecies.org4 h Diurnal pH/DO7.80.380.94.74.82.95.90.2178713561.611.111.030.711824107644418672429.60.822.40.2
laboratoryMenidia menidia (fish)159228marinespecies.org8 h Diurnal pH/DO8.00.074.13.26.52.15.70.1176313201.591.091.030.701818102644418612729.60.822.40.2
laboratoryMenidia menidia (fish)159228marinespecies.org12 h Diurnal pH/DO8.00.088.16.93.40.95.40.1178013241.571.081.010.691823102634318642729.60.822.40.2