Citation:

PANGAEA.918545

Name: Seawater carbonate chemistry and feeding behaviour of Scrobicularia plana
Published: 2020-06-09
License: https://creativecommons.org/licenses/by/4.0/
Keywords: Animalia; Behaviour; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Brackish waters; Community composition and diversity; Entire community; Laboratory experiment; Mollusca; North Atlantic; Scrobicularia plana; Single species; Soft-bottom community; Temperate; Temperature

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Abstract:

Ocean warming and acidification affect species populations, but how interactions within communities are affected and how this translates into ecosystem functioning and resilience remain poorly understood. Here we demonstrate that experimental ocean warming and acidification significantly alters the interaction network among porewater nutrients, primary producers, herbivores and burrowing invertebrates in a seafloor sediment community, and is linked to behavioural plasticity in the clam Scrobicularia plana. Warming and acidification induced a shift in the clam's feeding mode from predominantly suspension feeding under ambient conditions to deposit feeding with cascading effects on nutrient supply to primary producers. Surface-dwelling invertebrates were more tolerant to warming and acidification in the presence of S. plana, most probably due to the stimulatory effect of the clam on their microalgal food resources. This study demonstrates that predictions of population resilience to climate change require consideration of non-lethal effects such as behavioural changes of key species.

Keyword(s):

Animalia; Behaviour; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Brackish waters; Community composition and diversity; Entire community; Laboratory experiment; Mollusca; North Atlantic; Scrobicularia plana; Single species; Soft-bottom community; Temperate; Temperature

Supplement to:

Van Colen, Carl; Ong, Ee Zin; Briffa, Mark; Wethey, David S; Abatih, Emmanuel; Moens, T; Woodin, Sarah A (2020): Clam feeding plasticity reduces herbivore vulnerability to ocean warming and acidification. Nature Climate Change, 10(2), 162-166, https://doi.org/10.1038/s41558-019-0679-2

Original version:

Van Colen, Carl; Ong, Ee Zin (2019): Data for the Nature Climate Change article "Clam feeding plasticity reduces herbivore vulnerability to ocean warming and acidification" [dataset]. Marine Data Archive, https://doi.org/10.14284/389

Further details:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Coverage:

Latitude: 51.350400 * Longitude: 3.730900

Minimum DEPTH, sediment/rock: -0.038 m * Maximum DEPTH, sediment/rock: 0.000 m

Event(s):

Schelde_estuary * Latitude: 51.350400 * Longitude: 3.730900 * Method/Device: Experiment (EXP)

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-06-09.

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Type	Type		Van Colen, Carl		study
2	Species	Species		Van Colen, Carl
3	Registration number of species	Reg spec no		Van Colen, Carl
4	Uniform resource locator/link to reference	URL ref		Van Colen, Carl		WoRMS Aphia ID
5	Treatment	Treat		Van Colen, Carl
6	Frequency of events	Frequency	#/h	Van Colen, Carl		Suspension feeding
7	Frequency of events, standard error	Frequency std e	±	Van Colen, Carl		Suspension feeding
8	Frequency of events	Frequency	#/h	Van Colen, Carl		Deposit feeding
9	Frequency of events, standard error	Frequency std e	±	Van Colen, Carl		Deposit feeding
10	Time in minutes	Time	min	Van Colen, Carl		Suspension feeding
11	Time, standard error	Time std e	±	Van Colen, Carl		Suspension feeding
12	Time in minutes	Time	min	Van Colen, Carl		Deposit feeding
13	Time, standard error	Time std e	±	Van Colen, Carl		Deposit feeding
14	Microalgal biomass	Microalgal biom	µg/g	Van Colen, Carl
15	Biomass, standard error	Biom std e	±	Van Colen, Carl
16	Nitrite	[NO2]-	µmol/l	Van Colen, Carl
17	Nitrite, standard error	[NO2]- std e	±	Van Colen, Carl
18	Silicate	Si(OH)4	µmol/l	Van Colen, Carl
19	Silicate, standard error	Si(OH)4 std e	±	Van Colen, Carl
20	Phosphate	[PO4]3-	µmol/l	Van Colen, Carl
21	Phosphate, standard error	PO4 std e	±	Van Colen, Carl
22	Freshness	Freshness		Van Colen, Carl
23	Freshness, standard error	Freshness std e	±	Van Colen, Carl
24	Individuals	Ind	#	Van Colen, Carl		H. filiformis per tray
25	Individuals, standard error	Ind std e	±	Van Colen, Carl		H. filiformis per tray
26	Individuals	Ind	#	Van Colen, Carl		P. ulvae per tray
27	Individuals, standard error	Ind std e	±	Van Colen, Carl		P. ulvae per tray
28	Individuals	Ind	#	Van Colen, Carl		H. diversicolor per tray
29	Individuals, standard error	Ind std e	±	Van Colen, Carl		H. diversicolor per tray
30	Individuals	Ind	#	Van Colen, Carl		Nematodes per tray
31	Individuals, standard error	Ind std e	±	Van Colen, Carl		Nematodes per tray
32	DEPTH, sediment/rock	Depth sed	m	Van Colen, Carl		Geocode
33	pH	pH		Van Colen, Carl		Sediment vertical, total scale
34	pH, standard error	pH std e	±	Van Colen, Carl		Sediment vertical, total scale
35	Temperature, water	Temp	°C	Van Colen, Carl
36	Temperature, water, standard error	T std e	±	Van Colen, Carl
37	pH	pH		Van Colen, Carl		total scale
38	pH, standard error	pH std e	±	Van Colen, Carl		total scale
39	Salinity	Sal		Van Colen, Carl
40	Salinity, standard error	Sal std e	±	Van Colen, Carl
41	Alkalinity, total	AT	µmol/kg	Van Colen, Carl
42	Alkalinity, total, standard error	AT std e	±	Van Colen, Carl
43	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Van Colen, Carl	Calculated using CO2SYS
44	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard error	pCO2water_SST_wet std e	±	Van Colen, Carl	Calculated using CO2SYS
45	Bicarbonate ion	[HCO3]-	µmol/kg	Van Colen, Carl	Calculated using CO2SYS
46	Bicarbonate ion, standard error	[HCO3]- std e	±	Van Colen, Carl	Calculated using CO2SYS
47	Carbonate ion	[CO3]2-	µmol/kg	Van Colen, Carl	Calculated using CO2SYS
48	Carbonate ion, standard error	[CO3]2- std e	±	Van Colen, Carl	Calculated using CO2SYS
49	Aragonite saturation state	Omega Arg		Van Colen, Carl	Calculated using CO2SYS
50	Aragonite saturation state, standard error	Omega Arg std e	±	Van Colen, Carl	Calculated using CO2SYS
51	Calcite saturation state	Omega Cal		Van Colen, Carl	Calculated using CO2SYS
52	Calcite saturation state, standard error	Omega Cal std e	±	Van Colen, Carl	Calculated using CO2SYS
53	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
54	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
55	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
56	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
57	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
58	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
59	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
60	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
61	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

734 data points

Data

Download dataset as tab-delimited text — use the following character encoding:

1 Type (study)	2 Species	3 Reg spec no	4 URL ref (WoRMS Aphia ID)	5 Treat	6 Frequency [#/h] (Suspension feeding)	7 Frequency std e [±] (Suspension feeding)	8 Frequency [#/h] (Deposit feeding)	9 Frequency std e [±] (Deposit feeding)	10 Time [min] (Suspension feeding)	11 Time std e [±] (Suspension feeding)	12 Time [min] (Deposit feeding)	13 Time std e [±] (Deposit feeding)	14 Microalgal biom [µg/g]	15 Biom std e [±]	16 [NO2]- [µmol/l]	17 [NO2]- std e [±]	18 Si(OH)4 [µmol/l]	19 Si(OH)4 std e [±]	20 [PO4]3- [µmol/l]	21 PO4 std e [±]	22 Freshness	23 Freshness std e [±]	24 Ind [#] (H. filiformis per tray)	25 Ind std e [±] (H. filiformis per tray)	26 Ind [#] (P. ulvae per tray)	27 Ind std e [±] (P. ulvae per tray)	28 Ind [#] (H. diversicolor per tray)	29 Ind std e [±] (H. diversicolor per tray)	30 Ind [#] (Nematodes per tray)	31 Ind std e [±] (Nematodes per tray)	32 Depth sed [m]	33 pH (Sediment vertical, total scale)	34 pH std e [±] (Sediment vertical, total scale)	35 Temp [°C]	36 T std e [±]	37 pH (total scale)	38 pH std e [±] (total scale)	39 Sal	40 Sal std e [±]	41 AT [µmol/kg]	42 AT std e [±]	43 pCO2water_SST_wet [µatm] (Calculated using CO2SYS)	44 pCO2water_SST_wet std e [±] (Calculated using CO2SYS)	45 [HCO3]- [µmol/kg] (Calculated using CO2SYS)	46 [HCO3]- std e [±] (Calculated using CO2SYS)	47 [CO3]2- [µmol/kg] (Calculated using CO2SYS)	48 [CO3]2- std e [±] (Calculated using CO2SYS)	49 Omega Arg (Calculated using CO2SYS)	50 Omega Arg std e [±] (Calculated using CO2SYS)	51 Omega Cal (Calculated using CO2SYS)	52 Omega Cal std e [±] (Calculated using CO2SYS)	53 CSC flag (Calculated using seacarb afte...)	54 CO2 [µmol/kg] (Calculated using seacarb afte...)	55 fCO2water_SST_wet [µatm] (Calculated using seacarb afte...)	56 pCO2water_SST_wet [µatm] (Calculated using seacarb afte...)	57 [HCO3]- [µmol/kg] (Calculated using seacarb afte...)	58 [CO3]2- [µmol/kg] (Calculated using seacarb afte...)	59 DIC [µmol/kg] (Calculated using seacarb afte...)	60 Omega Arg (Calculated using seacarb afte...)	61 Omega Cal (Calculated using seacarb afte...)
laboratory	Scrobicularia plana (mollusk)	141424	marinespecies.org	No acidification/warming	0.508	0.070	0.277	0.068	85.78	11.68	24.88	6.248																						10.0	0.30	8.03	0.04	30.2	0.03	2587	3.0	501	52	2268	22.0	133	10.0	2.0	0.16	3.3	0.25	8	21.80	483.38	485.25	2269.23	132.47	2423.50	2.04	3.24
laboratory	Scrobicularia plana (mollusk)	141424	marinespecies.org	Acidification	0.296	0.138	0.194	0.070	48.75	25.43	23.03	10.318																						10.3	0.17	7.43	0.01	30.3	0.08	2590	3.5	2141	73	2500	4.8	37	1.1	0.6	0.02	0.9	0.03	8	94.83	2124.36	2132.56	2500.63	37.20	2632.65	0.57	0.91
laboratory	Scrobicularia plana (mollusk)	141424	marinespecies.org	Warming	0.434	0.146	0.720	0.272	65.65	22.04	72.08	27.201																						13.0	0.32	7.98	0.04	30.5	0.15	2590	4.1	574	63	2265	30.0	136	13.0	2.1	0.20	3.3	0.32	8	22.63	553.81	555.87	2269.87	133.78	2426.29	2.07	3.28
laboratory	Scrobicularia plana (mollusk)	141424	marinespecies.org	Acidification and warming	0.102	0.077	0.868	0.300	5.55	3.38	75.03	34.871																						13.0	0.12	7.46	0.04	30.6	0.23	2591	3.8	2020	171	2482	12.0	45	3.7	0.7	0.06	1.1	0.09	8	81.96	2006.48	2013.96	2484.74	44.34	2611.04	0.69	1.09
laboratory				No acidification/warming									15.88	0.83	5.22	1.46	496.82	40.92	56.39	11.59	16.07	0.97	7.0	1.4	115.6	20.0	15.6	2.01	784.7	59.6																						8	13.32	368.61	369.92	1917.22	177.36	2107.90	2.76	4.29
laboratory				Acidification									17.25	1.27	1.17	0.73	489.27	38.55	60.09	8.07	15.74	2.31	12.8	2.6	127.4	28.4	11.4	4.37	820.1	91.4
laboratory				Warming									14.45	1.34	5.55	2.95	458.96	52.05	61.62	32.55	17.28	0.88	6.8	2.3	7.0	1.8	27.3	4.50	506.3	43.8
laboratory				Acidification and warming									13.62	0.46	3.66	0.89	385.39	41.38	35.32	11.99	20.06	3.00	12.8	2.3	56.2	25.9	18.0	4.83	742.0	111.8																						8	37.84	1144.80	1148.72	2172.74	84.67	2295.25	1.33	2.05
laboratory				No acidification/warming																											0.000	7.967	0.004																			8	13.32	368.61	369.92	1917.22	177.36	2107.90	2.76	4.29
laboratory				No acidification/warming																											-0.003	7.960	0.008																			8	13.32	368.61	369.92	1917.22	177.36	2107.90	2.76	4.29
laboratory				No acidification/warming																											-0.006	7.990	0.091																			8	13.32	368.61	369.92	1917.22	177.36	2107.90	2.76	4.29
laboratory				No acidification/warming																											-0.009	7.707	0.093																			8	13.32	368.61	369.92	1917.22	177.36	2107.90	2.76	4.29
laboratory				No acidification/warming																											-0.012	7.219	0.017																			8	13.32	368.61	369.92	1917.22	177.36	2107.90	2.76	4.29
laboratory				No acidification/warming																											-0.015	7.034	0.018																			8	13.32	368.61	369.92	1917.22	177.36	2107.90	2.76	4.29
laboratory				No acidification/warming																											-0.018	6.958	0.041																			8	13.32	368.61	369.92	1917.22	177.36	2107.90	2.76	4.29
laboratory				No acidification/warming																											-0.021	6.883	0.026																			8	13.32	368.61	369.92	1917.22	177.36	2107.90	2.76	4.29
laboratory				No acidification/warming																											-0.024	6.866	0.014																			8	13.32	368.61	369.92	1917.22	177.36	2107.90	2.76	4.29
laboratory				No acidification/warming																											-0.027	6.876	0.014																			8	13.32	368.61	369.92	1917.22	177.36	2107.90	2.76	4.29
laboratory				No acidification/warming																											-0.030	6.898	0.010																			8	13.32	368.61	369.92	1917.22	177.36	2107.90	2.76	4.29
laboratory				No acidification/warming																											-0.033	6.931	0.016																			8	13.32	368.61	369.92	1917.22	177.36	2107.90	2.76	4.29
laboratory				No acidification/warming																											-0.036	6.976	0.030																			8	13.32	368.61	369.92	1917.22	177.36	2107.90	2.76	4.29
laboratory				No acidification/warming																											-0.038	7.023	0.024																			8	13.32	368.61	369.92	1917.22	177.36	2107.90	2.76	4.29
laboratory				Acidification																											0.000	7.362	0.059
laboratory				Acidification																											-0.003	7.638	0.103
laboratory				Acidification																											-0.006	7.661	0.305
laboratory				Acidification																											-0.009	7.366	0.239
laboratory				Acidification																											-0.012	6.985	0.088
laboratory				Acidification																											-0.015	6.847	0.043
laboratory				Acidification																											-0.018	6.786	0.036
laboratory				Acidification																											-0.021	6.764	0.043
laboratory				Acidification																											-0.024	6.721	0.038
laboratory				Acidification																											-0.027	6.745	0.052
laboratory				Acidification																											-0.030	6.765	0.067
laboratory				Acidification																											-0.033	6.797	0.078
laboratory				Acidification																											-0.036	6.824	0.081
laboratory				Acidification																											-0.038	6.858	0.082
laboratory				Warming																											0.000	7.978	0.022
laboratory				Warming																											-0.003	8.089	0.087
laboratory				Warming																											-0.006	7.823	0.309
laboratory				Warming																											-0.009	7.335	0.256
laboratory				Warming																											-0.012	7.135	0.262
laboratory				Warming																											-0.015	6.950	0.138
laboratory				Warming																											-0.018	6.838	0.051
laboratory				Warming																											-0.021	6.811	0.036
laboratory				Warming																											-0.024	6.808	0.037
laboratory				Warming																											-0.027	6.811	0.046
laboratory				Warming																											-0.030	6.820	0.052
laboratory				Warming																											-0.033	6.837	0.054
laboratory				Warming																											-0.036	6.875	0.064
laboratory				Warming																											-0.038	6.900	0.073
laboratory				Acidification and warming																											0.000	7.372	0.047																			8	37.84	1144.80	1148.72	2172.74	84.67	2295.25	1.33	2.05
laboratory				Acidification and warming																											-0.003	7.583	0.294																			8	37.84	1144.80	1148.72	2172.74	84.67	2295.25	1.33	2.05
laboratory				Acidification and warming																											-0.006	7.491	0.333																			8	37.84	1144.80	1148.72	2172.74	84.67	2295.25	1.33	2.05
laboratory				Acidification and warming																											-0.009	7.287	0.221																			8	37.84	1144.80	1148.72	2172.74	84.67	2295.25	1.33	2.05
laboratory				Acidification and warming																											-0.012	6.964	0.090																			8	37.84	1144.80	1148.72	2172.74	84.67	2295.25	1.33	2.05
laboratory				Acidification and warming																											-0.015	6.858	0.059																			8	37.84	1144.80	1148.72	2172.74	84.67	2295.25	1.33	2.05
laboratory				Acidification and warming																											-0.018	6.826	0.046																			8	37.84	1144.80	1148.72	2172.74	84.67	2295.25	1.33	2.05
laboratory				Acidification and warming																											-0.021	6.811	0.050																			8	37.84	1144.80	1148.72	2172.74	84.67	2295.25	1.33	2.05
laboratory				Acidification and warming																											-0.024	6.818	0.060																			8	37.84	1144.80	1148.72	2172.74	84.67	2295.25	1.33	2.05
laboratory				Acidification and warming																											-0.027	6.844	0.065																			8	37.84	1144.80	1148.72	2172.74	84.67	2295.25	1.33	2.05
laboratory				Acidification and warming																											-0.030	6.866	0.069																			8	37.84	1144.80	1148.72	2172.74	84.67	2295.25	1.33	2.05
laboratory				Acidification and warming																											-0.033	6.905	0.085																			8	37.84	1144.80	1148.72	2172.74	84.67	2295.25	1.33	2.05
laboratory				Acidification and warming																											-0.036	6.948	0.089																			8	37.84	1144.80	1148.72	2172.74	84.67	2295.25	1.33	2.05
laboratory				Acidification and warming																											-0.038	6.973	0.087																			8	37.84	1144.80	1148.72	2172.74	84.67	2295.25	1.33	2.05