# | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
1 | Event label | Event | | Badewien, Thomas H | | |
2 | Station label | Station | | Giebel, Helge-Ansgar | | CTD station |
3 | Station label | Station | | Giebel, Helge-Ansgar | | in publication |
4 | DATE/TIME | Date/Time | | Badewien, Thomas H | | Geocode |
5 | LATITUDE | Latitude | | Badewien, Thomas H | | Geocode |
6 | LONGITUDE | Longitude | | Badewien, Thomas H | | Geocode |
7 | ELEVATION | Elevation | m a.s.l. | Badewien, Thomas H | | Geocode |
8 | DEPTH, water | Depth water | m | Badewien, Thomas H | | Geocode |
9 | Biogeographical province | BG province | | Giebel, Helge-Ansgar | Biogeographical province after Longhurst (2006) | |
10 | Pressure, water | Press | dbar | Badewien, Thomas H | CTD, Sea-Bird, SBE 911plus [SN: 09-1266] | |
11 | Temperature, water | Temp | °C | Zielinski, Oliver | CTD, SEA-BIRD SBE 911plus, SN 5828 / SN 4529 | ITS-90, mean of Sensor 1+2 for cruise SO254 |
12 | Temperature, water, potential | Tpot | °C | Badewien, Thomas H | Calculated | |
13 | Conductivity | Cond | mS/cm | Zielinski, Oliver | CTD, SEA-BIRD SBE 911plus, SN 5828 / SN 4529 | Mean of Sensor 1+2 |
14 | Salinity | Sal | | Badewien, Thomas H | CTD, Sea-Bird, SBE 911plus [SN: 09-1266] | PSS78 |
15 | Salinity | Sal | | Badewien, Thomas H | Calculated | TEOS10 |
16 | Density, sigma-theta (0) | Sigma-theta | kg/m3 | Zielinski, Oliver | Calculated | Mean of Sensor 1+2 only for Cruise SO254 |
17 | Sound velocity in water | SV | m/s | Zielinski, Oliver | | |
18 | Oxygen | O2 | µmol/kg | Badewien, Thomas H | Oxygen optode, Aanderaa, type 4831F | |
19 | Turbidity (Nephelometric turbidity unit) | Turbidity | NTU | Badewien, Thomas H | Fluorometer, WET Labs ECO AFL/FL | |
20 | Fluorescence, chlorophyll | F chl | µg/l | Badewien, Thomas H | Fluorometer, WET Labs ECO AFL/FL | |
21 | Chlorophyll a | Chl a | µg/l | Giebel, Helge-Ansgar | Acetone extraction, fluorescence determination | |
22 | Nitrogen, organic, particulate | PON | µg/l | Giebel, Helge-Ansgar | Combustion by FlashEA 1112 CHN-analyzer | |
23 | Carbon, organic, particulate | POC | µg/l | Giebel, Helge-Ansgar | Combustion by FlashEA 1112 CHN-analyzer | |
24 | Carbon, organic, particulate/Nitrogen, organic, particulate ratio | POC/PON | | Giebel, Helge-Ansgar | Calculated | Calculated: POC/12:PON/14, mol% |
25 | Silicate | Si(OH)4 | µmol/l | Giebel, Helge-Ansgar | Fluorescence determination | DL <0.1 µmol/l |
26 | Phosphate | [PO4]3- | µmol/l | Giebel, Helge-Ansgar | Fluorescence determination | DL <0.04 µmol/l |
27 | Nitrogen oxide | NOx | µmol/l | Giebel, Helge-Ansgar | Fluorescence determination | DL <0.32 µmol/l |
28 | Nitrite | [NO2]- | µmol/l | Giebel, Helge-Ansgar | Fluorescence determination | DL <0.07 µmol/l |
29 | Nitrate | [NO3]- | µmol/l | Giebel, Helge-Ansgar | Calculated | NO3 = NOx - NO2 |
30 | Amino acid, total dissolved free | DFAA | nmol/l | Giebel, Helge-Ansgar | High performance liquid chromatography (HPLC) using an Agilent 1200 HPLC device after an ortho-phthaldialdehyde precolumn derivatization (Lindroth and Mopper, 1979) with slight modifications as described by Lunau et al. (2006) | |
31 | Amino acid, total dissolved free uptake | DFAA upt | nmol/l/h | Simon, Meinhard | Incorporation of 3H-Amino acid mix (Simon et al. 2004, doi:10.4319/lo.2004.49.4.1035; 2007, doi:10.4319/lo.2007.52.1.0085) | |
32 | Amino acid, total hydrolysable dissolved | THDAA | nmol/l | Giebel, Helge-Ansgar | HPLC after Lindroth and Mopper (1979) with slight modifications as described by Lunau et al. (2006) | |
33 | Amino acids, dissolved combined | DCAA | nmol/l | Giebel, Helge-Ansgar | Calculated; DCAA = THDAA - DFAA; after Lunau et al. (2006) | |
34 | Carbohydrates, dissolved, neutral free | DFCHO | nmol/l | Giebel, Helge-Ansgar | High Performance Liquid Chromatography (HPLC) using anion-exchange columns by pulsed amperometric detection according to Mopper et al. (1992) | |
35 | Carbohydrates, dissolved, neutral free, uptake | DFCHO upt | nmol/l/h | Simon, Meinhard | Incorporation of 3H-Glucose (Simon et al. 2004, doi:10.4319/lo.2004.49.4.1035; 2007, doi:10.4319/lo.2007.52.1.0085) | |
36 | Carbohydrates, total hydrolyzable | THCHO | nmol/l | Giebel, Helge-Ansgar | High Performance Liquid Chromatography (HPLC) using anion-exchange columns by pulsed amperometric detection according to Mopper et al. (1992) | |
37 | Prokaryotes, heterotroph | Prok het | #/ml | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | data corrected by substraction of population(s) of cyanobacteria within the HNA gate, Prokaryotes = HNA-cyanos2+LNA |
38 | High nucleic acid bacteria | HNA | #/ml | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | high nucleic acid (HNA) content prokaryotic cells, data corrected by substraction of population of cyanobacteria within the HNA gate, HNA-cyanobacteria population 2 |
39 | Bacteria, heterotrophic with relatively low DNA content | LNA | #/ml | Giebel, Helge-Ansgar | | low nucleic acid (LNA) content prokaryotic cells |
40 | High nucleic acid bacteria | HNA | % | Giebel, Helge-Ansgar | Calculated | |
41 | Low nucleic acid bacteria | LNA | % | Giebel, Helge-Ansgar | Calculated | |
42 | Cyanobacteria | Cyanobact | #/ml | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | Cyanobacteria = sum of Cyanobacteria population 1 + Cyanobacteria population 2 |
43 | Cyanobacteria | Cyanobact | #/ml | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | Population 1, main population aside bacterial population |
44 | Cyanobacteria | Cyanobact | #/ml | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | Population 2, Cyanobacterial population within HNA. |
45 | Cyanobacteria | Cyanobacteria | % | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | Calculated: Cyanobacteria / heterotrophic Prokaryotes*100 |
46 | Flagellates+algae | Flagellates+algae | #/ml | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | Size limitation due to device, <50 µm |
47 | Prokaryotes, cell size, forward scatter | Prok FSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | |
48 | High nucleic acid bacteria, cell size, forward scatter | HNA FSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | |
49 | Low nucleic acid bacteria, cell size, forward scatter | LNA FSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | |
50 | Cyanobacteria, cell size, forward scatter | Cyanobacteria FSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | Population 1 |
51 | Cyanobacteria, cell size, forward scatter | Cyanobacteria FSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | Population 2 |
52 | Flagellates+algae, cell size, forward scatter | Flagellates+algae FSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | |
53 | Prokaryotes, cell size, relative | Prok cell size rel | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [calibration of the forward scatter (FSC), only relative cell size due to calibration after Giebel et al. (2019)] | Given is the relative cell size in "relative µm" due to calibration after Giebel et al. (2019) |
54 | High nucleic acid bacteria, cell size, relative | HNA cell size rel | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [calibration of the forward scatter (FSC), only relative cell size due to calibration after Giebel et al. (2019)] | Given is the relative cell size in "relative µm" due to calibration after Giebel et al. (2019) |
55 | Low nucleic acid bacteria, cell size, relative | LNA cell size rel | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [calibration of the forward scatter (FSC), only relative cell size due to calibration after Giebel et al. (2019)] | Given is the relative cell size in "relative µm" due to calibration after Giebel et al. (2019) |
56 | Prokaryotes, heterotroph, cell size, side scatter | Prok het SSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | |
57 | High nucleic acid bacteria, cell size, side scatter | HNA SSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | |
58 | Low nucleic acid bacteria, cell size, side scatter | LNA SSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | |
59 | Cyanobacteria, cell size, side scatter | Cyanobacteria SSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | Population 1 |
60 | Cyanobacteria, cell size, side scatter | Cyanobacteria SSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | Population 2 |
61 | Flagellates+algae, cell size, side scatter | Flagellates+algae SSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [SybrGreenI staining] | |
62 | Picoplankton | Picopl | #/ml | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence (AF)] | |
63 | Nanoplankton | Nanopl | #/ml | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence (AF)] | |
64 | Microplankton | Micropl | #/ml | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence (AF)] | |
65 | Eukaryotes | Euka | #/ml | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence (AF)] | Eucaryotes = sum (Pico + Nano + Micro) |
66 | Picoplankton, cell size, forward scatter | Picopl FSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence (AF)] | |
67 | Nanoplankton, cell size, forward scatter | Nanopl FSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence (AF)] | |
68 | Microplankton, cell size, forward scatter | Micropl FSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence (AF)] | |
69 | Eukaryotes, cell size, forward scatter | Eukaryotes FSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence (AF)] | |
70 | Picoplankton, cell size, relative | Picopl cell size rel | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence, calibration of the forward scatter (FSC)] | Given is the relative cell size in "relative µm" due to calibration after Giebel et al. (2019) |
71 | Nanoplankton, cell size, relative | Nanopl cell size rel | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence, calibration of the forward scatter (FSC)] | Given is the relative cell size in "relative µm" due to calibration after Giebel et al. (2019) |
72 | Microplankton, cell size, relative | Micropl cell size rel | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence, calibration of the forward scatter (FSC)] | Given is the relative cell size in "relative µm" due to calibration after Giebel et al. (2019) |
73 | Eukaryotes, cell size, relative | Eukaryotes cell size rel | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence, calibration of the forward scatter (FSC)] | Given is the relative cell size in "relative µm" due to calibration after Giebel et al. (2019) |
74 | Picoplankton, cell size, side scatter | Picopl SSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence (AF)] | related to cell granularity: cell-structure, -inclusions, -size, -shape |
75 | Nanoplankton, cell size, side scatter | Nanopl SSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence (AF)] | related to cell granularity: cell-structure, -inclusions, -size, -shape |
76 | Microplankton, cell size, side scatter | Micropl SSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence (AF)] | related to cell granularity: cell-structure, -inclusions, -size, -shape |
77 | Eukaryotes, cell size, side scatter | Eukaryotes SSC | | Giebel, Helge-Ansgar | Flow Cytometer, BD Biosciences, C6 [autofluorescence (AF)] | related to cell granularity: cell-structure, -inclusions, -size, -shape |
78 | Prokaryotes, heterotroph, carbon production | Prok het C prod | ng/l/h | Simon, Meinhard | Incorporation of 14C-leucine (Simon and Azam, 1989, http://www.int-res.com/articles/meps/51/m051p201.pdf; Simon et al. 2004, doi:10.4319/lo.2004.49.4.1035) | |
79 | Prokaryotes, heterotroph, nitrogen production | Prok het N prod | ng/l/h | Simon, Meinhard | Incorporation of 14C-leucine (Simon and Azam, 1989, http://www.int-res.com/articles/meps/51/m051p201.pdf; Simon et al. 2004, doi:10.4319/lo.2004.49.4.1035) | |
80 | Prokaryotes, heterotroph, protein production | Prok het protein prod | ng/l/h | Simon, Meinhard | Incorporation of 14C-leucine (Simon and Azam, 1989, http://www.int-res.com/articles/meps/51/m051p201.pdf; Simon et al. 2004, doi:10.4319/lo.2004.49.4.1035) | |
81 | Prokaryotes, growth rate | Prok µ | 1/day | Simon, Meinhard | Incorporation of 14C-leucine (Simon and Azam, 1989, http://www.int-res.com/articles/meps/51/m051p201.pdf; Simon et al. 2004, doi:10.4319/lo.2004.49.4.1035) | |
82 | Generation time | Gen time | day | Simon, Meinhard | Incorporation of 14C-leucine (Simon and Azam, 1989, http://www.int-res.com/articles/meps/51/m051p201.pdf; Simon et al. 2004, doi:10.4319/lo.2004.49.4.1035) | prokaryotic |
83 | Prokaryotes, heterotroph, biomass production in mass protein | Prok het biom prod protein | µg/l/day | Simon, Meinhard | Incorporation of 14C-leucine (Simon and Azam, 1989, http://www.int-res.com/articles/meps/51/m051p201.pdf; Simon et al. 2004, doi:10.4319/lo.2004.49.4.1035) | HPBP |
84 | Turnover rate, amino acids, dissolved, free | k amino acids dissolved free | 1/day | Simon, Meinhard | Incorporation of 3H-Amino acid mix (Simon et al. 2004, doi:10.4319/lo.2004.49.4.1035; 2007, doi:10.4319/lo.2007.52.1.0085) | |
85 | Turnover rate, glucose | k glc | 1/day | Simon, Meinhard | Incorporation of 3H-Glucose (Simon et al. 2004, doi:10.4319/lo.2004.49.4.1035; 2007, doi:10.4319/lo.2007.52.1.0085) | |
86 | Turnover rate, acetate | k acetate | 1/day | Simon, Meinhard | Incorporation of 3H-acetate (Simon et al. 2007, doi:10.4319/lo.2007.52.1.0085) | |
87 | Hydrolysis rate, beta-Glucose | Hydrol rate b-Glc | nmol/l/h | Balmonte, John Paul | Breakdown of fluorescent substrate analoga (Obayashi and Suzuki, 2005, Limnol Oceanogr; Balmonte et al ., 2018, Environ Microbiol) | beta-glucopyranoside, beta-glucosidase activity, More enzyme activity data can be accessed at the BCO-DMO database (https://www.bco-dmo.org/; doi:10.26008/1912/bco-dmo.743274.1) |
88 | Hydrolysis rate, Leucine | Hydrol rate Leucine | nmol/l/h | Balmonte, John Paul | Breakdown of fluorescent substrate analoga (Obayashi and Suzuki, 2005, Limnol Oceanogr; Balmonte et al ., 2018, Environ Microbiol) | petidase activity, More enzyme activity data can be accessed at the BCO-DMO database (https://www.bco-dmo.org/; doi:10.26008/1912/bco-dmo.743274.1) |
89 | Synechococcus | Synechococcus | #/ml | Giebel, Helge-Ansgar | BD FACS ARIA3 Flow Cytometer, autofluorescence (AF) | surface populations were extrapolated, if partly under threshold. |
90 | Synechococcus, cell size, forward scatter | Synechococcus FSC | | Giebel, Helge-Ansgar | BD FACS ARIA3 Flow Cytometer, autofluorescence (AF) | |
91 | Synechococcus, cell size, side scatter | Synechococcus SSC | | Giebel, Helge-Ansgar | BD FACS ARIA3 Flow Cytometer, autofluorescence (AF) | related to cell granularity and complexity: cell-structure, -inclusions, -size, -shape |
92 | Prochlorococcus | Prochlorococcus | #/ml | Giebel, Helge-Ansgar | BD FACS ARIA3 Flow Cytometer, autofluorescence (AF) | surface populations were extrapolated, if partly under threshold. |
93 | Prochlorococcus, cell size, forward scatter | Prochlorococcus FSC | | Giebel, Helge-Ansgar | BD FACS ARIA3 Flow Cytometer, autofluorescence (AF) | |
94 | Prochlorococcus, cell size, side scatter | Prochlorococcus SSC | | Giebel, Helge-Ansgar | BD FACS ARIA3 Flow Cytometer, autofluorescence (AF) | related to cell granularity and complexity: cell-structure, -inclusions, -size, -shape |
95 | Mixed layer depth | MLD | m | Giebel, Helge-Ansgar | | |
96 | Forel-Ule index | FUI | # | Zielinski, Oliver | | #2 = 2-3, #1 = 1-2 |
97 | Depth of Secchi Disk | z(SD) | m | Zielinski, Oliver | | |
98 | Depth, relative | Depth rel | m | Zielinski, Oliver | Calculated from downwelling photosynthetically active radiation PAR Ed, integrated from 400 - 700 nm | of 1% photosynthetically active radiation, doi:10.1594/PANGAEA.911985 |
99 | Depth, relative | Depth rel | m | Zielinski, Oliver | Calculated from downwelling photosynthetically active radiation PAR Ed, integrated from 400 - 700 nm | of 10% photosynthetically active radiation, doi:10.1594/PANGAEA.911985 |
100 | Cytophaga-Flavobacteria | Cytophaga-Flavobacteria | % | Bakenhus, Insa | Catalyzed reporter deposition fluorescence in situ hybridisation (CARD-FISH), % of the DAPI positive stained cells | |
101 | Cytophaga-Flavobacteria, cells | Cytophaga-Flavobacteria cells | 105 #/ml | Bakenhus, Insa | Catalyzed reporter deposition fluorescence in situ hybridisation (CARD-FISH) | |
102 | Roseobacter | Roseob | % | Bakenhus, Insa | Catalyzed reporter deposition fluorescence in situ hybridisation (CARD-FISH), % of the DAPI positive stained cells | |
103 | Roseobacter, cells | Roseobacter cells | 105 #/ml | Bakenhus, Insa | Catalyzed reporter deposition fluorescence in situ hybridisation (CARD-FISH) | |
104 | SAR11 | SAR11 | % | Bakenhus, Insa | Catalyzed reporter deposition fluorescence in situ hybridisation (CARD-FISH), % of the DAPI positive stained cells | For applied probe see Bakenhus et al. 2018, Front Microbiol, doi:10.1111/1462-2920.14383 |
105 | SAR11, cells | SAR11 cells | 105 #/ml | Bakenhus, Insa | Catalyzed reporter deposition fluorescence in situ hybridisation (CARD-FISH) | |
106 | Gammaproteobacteria | Gammaproteobacteria | % | Bakenhus, Insa | Catalyzed reporter deposition fluorescence in situ hybridisation (CARD-FISH), % of the DAPI positive stained cells | |
107 | Gammaproteobacteria, cells | Gammaproteobacteria cells | 105 #/ml | Bakenhus, Insa | Catalyzed reporter deposition fluorescence in situ hybridisation (CARD-FISH) | |
108 | Polaribacter | Polaribacter | % | Bakenhus, Insa | Catalyzed reporter deposition fluorescence in situ hybridisation (CARD-FISH), % of the DAPI positive stained cells | |
109 | Polaribacter, cells | Polaribacter cells | 105 #/ml | Bakenhus, Insa | Catalyzed reporter deposition fluorescence in situ hybridisation (CARD-FISH) | |
110 | Roseobacter clade affiliated cluster, Planktomarina temperata | RCA Planktomarina temperata | % | Bakenhus, Insa | Catalyzed reporter deposition fluorescence in situ hybridisation (CARD-FISH), % of the DAPI positive stained cells | |
111 | Roseobacter clade affiliated cluster, Planktomarina temperata, cells | RCA Planktomarina temperata cells | 105 #/ml | Bakenhus, Insa | Catalyzed reporter deposition fluorescence in situ hybridisation (CARD-FISH) | |