Venn, Alexander A; Bernardet, Coralie; Chabenat, Apolline; Tambutté, Eric; Tambutté, Sylvie (2020): Half-times of calcein influx to the coral calcifying medium under conditions of seawater acidification and temperature variation [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.918127
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Abstract:
Half-time of calcein influx was measured in the coral Stylophora pistillata as a method to investigate paracellular transport. pH was also measured in the extracellular calcifying medium (pHECM) and in the calcifying cells (pHi). The measurements were made at the Centre Scientifique de Monaco between 2016 and 2019. Measurements were made using fluorescent dyes calcein and SNARF-1 using a confocal microscope.
Related to:
Venn, Alexander A; Bernardet, Coralie; Chabenat, Apolline; Tambutté, Eric; Tambutté, Sylvie (2020): Paracellular transport to the coral calcifying medium: effects of environmental parameters. Journal of Experimental Biology, 223(17), jeb227074, https://doi.org/10.1242/jeb.227074
Comment:
These data was used for figures 3-7 in the related manuscript.
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Experiment | Exp | Venn, Alexander A | |||
| 2 | Experimental treatment | Exp treat | Venn, Alexander A | |||
| 3 | Time in minutes | Time | min | Venn, Alexander A | Half time of calcein influx | |
| 4 | pH, extracellular | pHe | Venn, Alexander A | pHECM: pH in the extracellular calcifying medium | ||
| 5 | pH, intracellular | pH in | Venn, Alexander A | pHi: pH in the calcifying cells | ||
| 6 | Distance | Distance | µm | Venn, Alexander A | Distance to growing edge | |
| 7 | Comment | Comment | Venn, Alexander A |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Size:
317 data points
Data
| 1 Exp | 2 Exp treat | 3 Time [min] | 4 pHe | 5 pH in | 6 Distance [µm] | 7 Comment |
|---|---|---|---|---|---|---|
| Hyperosmotic treatment | glycine concentration: 200 mM | 4.69 | Data used for figure 4 in related manuscript | |||
| Hyperosmotic treatment | glycine concentration: 200 mM | 4.49 | Data used for figure 4 in related manuscript | |||
| Hyperosmotic treatment | glycine concentration: 200 mM | 2.79 | Data used for figure 4 in related manuscript | |||
| Hyperosmotic treatment | glycine concentration: 200 mM | 3.61 | Data used for figure 4 in related manuscript | |||
| Hyperosmotic treatment | glycine concentration: 200 mM | 3.41 | Data used for figure 4 in related manuscript | |||
| Seawater control | glycine concentration: 0 mM | 6.05 | Data used for figure 4 in related manuscript | |||
| Seawater control | glycine concentration: 0 mM | 5.78 | Data used for figure 4 in related manuscript | |||
| Seawater control | glycine concentration: 0 mM | 7.97 | Data used for figure 4 in related manuscript | |||
| Seawater control | glycine concentration: 0 mM | 7.27 | Data used for figure 4 in related manuscript | |||
| Seawater control | glycine concentration: 0 mM | 7.31 | Data used for figure 4 in related manuscript | |||
| Ambient seawater pH | pH: 8 | 6.83 | Data used for figure 5 in related manuscript | |||
| Ambient seawater pH | pH: 8 | 6.63 | Data used for figure 5 in related manuscript | |||
| Ambient seawater pH | pH: 8 | 7.66 | Data used for figure 5 in related manuscript | |||
| Ambient seawater pH | pH: 8 | 5.57 | Data used for figure 5 in related manuscript | |||
| Ambient seawater pH | pH: 8 | 8.01 | Data used for figure 5 in related manuscript | |||
| Seawater acidification | pH: 7.2 | 4.52 | Data used for figure 5 in related manuscript | |||
| Seawater acidification | pH: 7.2 | 6.16 | Data used for figure 5 in related manuscript | |||
| Seawater acidification | pH: 7.2 | 4.24 | Data used for figure 5 in related manuscript | |||
| Seawater acidification | pH: 7.2 | 5.06 | Data used for figure 5 in related manuscript | |||
| Seawater acidification | pH: 7.2 | 6.01 | Data used for figure 5 in related manuscript | |||
| Low temperature | temperature: 20°C | 8.63 | Data used for figure 6 in related manuscript | |||
| Low temperature | temperature: 20°C | 8.60 | Data used for figure 6 in related manuscript | |||
| Low temperature | temperature: 20°C | 10.84 | Data used for figure 6 in related manuscript | |||
| Low temperature | temperature: 20°C | 9.37 | Data used for figure 6 in related manuscript | |||
| Low temperature | temperature: 20°C | 9.14 | Data used for figure 6 in related manuscript | |||
| Control temperature | temperature: 25°C | 7.43 | Data used for figure 6 in related manuscript | |||
| Control temperature | temperature: 25°C | 4.85 | Data used for figure 6 in related manuscript | |||
| Control temperature | temperature: 25°C | 6.51 | Data used for figure 6 in related manuscript | |||
| Control temperature | temperature: 25°C | 7.33 | Data used for figure 6 in related manuscript | |||
| Control temperature | temperature: 25°C | 7.14 | Data used for figure 6 in related manuscript | |||
| Control temperature | temperature: 25°C | 8.01 | Data used for figure 6 in related manuscript | |||
| High temperature | temperature: 31°C | 12.39 | Data used for figure 6 in related manuscript | |||
| High temperature | temperature: 31°C | 6.29 | Data used for figure 6 in related manuscript | |||
| High temperature | temperature: 31°C | 6.53 | Data used for figure 6 in related manuscript | |||
| High temperature | temperature: 31°C | 9.02 | Data used for figure 6 in related manuscript | |||
| High temperature | temperature: 31°C | 7.21 | Data used for figure 6 in related manuscript | |||
| High temperature | temperature: 31°C | 7.08 | Data used for figure 6 in related manuscript | |||
| High temperature | temperature: 31°C | 6.61 | Data used for figure 6 in related manuscript | |||
| Low temperature | temperature: 20°C | 8.12 | 7.22 | Data used for figure 7 in related manuscript | ||
| Low temperature | temperature: 20°C | 8.12 | 7.32 | Data used for figure 7 in related manuscript | ||
| Low temperature | temperature: 20°C | 8.24 | 7.33 | Data used for figure 7 in related manuscript | ||
| Low temperature | temperature: 20°C | 8.18 | 7.28 | Data used for figure 7 in related manuscript | ||
| Control temperature | temperature: 25°C | 8.27 | 7.27 | Data used for figure 7 in related manuscript | ||
| Control temperature | temperature: 25°C | 8.24 | 7.25 | Data used for figure 7 in related manuscript | ||
| Control temperature | temperature: 25°C | 8.18 | 7.32 | Data used for figure 7 in related manuscript | ||
| Control temperature | temperature: 25°C | 8.09 | 7.32 | Data used for figure 7 in related manuscript | ||
| Control temperature | temperature: 25°C | 8.00 | Data used for figure 7 in related manuscript | |||
| High temperature | temperature: 31°C | 8.03 | 7.30 | Data used for figure 7 in related manuscript | ||
| High temperature | temperature: 31°C | 8.10 | 7.25 | Data used for figure 7 in related manuscript | ||
| High temperature | temperature: 31°C | 8.01 | 7.33 | Data used for figure 7 in related manuscript | ||
| High temperature | temperature: 31°C | 8.11 | 7.34 | Data used for figure 7 in related manuscript | ||
| High temperature | temperature: 31°C | 8.18 | 7.40 | Data used for figure 7 in related manuscript | ||
| Coral colony 1 | 7.48 | 25.8 | Data used for figure 3 in related manuscript | |||
| Coral colony 1 | 5.63 | 60.7 | Data used for figure 3 in related manuscript | |||
| Coral colony 1 | 6.23 | 83.2 | Data used for figure 3 in related manuscript | |||
| Coral colony 1 | 4.86 | 71.7 | Data used for figure 3 in related manuscript | |||
| Coral colony 2 | 6.36 | 243.0 | Data used for figure 3 in related manuscript | |||
| Coral colony 2 | 6.24 | 111.0 | Data used for figure 3 in related manuscript | |||
| Coral colony 2 | 4.17 | 113.0 | Data used for figure 3 in related manuscript | |||
| Coral colony 2 | 6.36 | 31.1 | Data used for figure 3 in related manuscript | |||
| Coral colony 3 | 8.92 | 48.6 | Data used for figure 3 in related manuscript | |||
| Coral colony 3 | 8.22 | 67.9 | Data used for figure 3 in related manuscript | |||
| Coral colony 3 | 8.83 | 79.9 | Data used for figure 3 in related manuscript | |||
| Coral colony 3 | 7.89 | 90.5 | Data used for figure 3 in related manuscript | |||
| Coral colony 3 | 9.07 | 101.0 | Data used for figure 3 in related manuscript | |||
| Coral colony 4 | 6.30 | 45.9 | Data used for figure 3 in related manuscript | |||
| Coral colony 4 | 6.92 | 130.0 | Data used for figure 3 in related manuscript | |||
| Coral colony 4 | 6.48 | 98.3 | Data used for figure 3 in related manuscript | |||
| Coral colony 5 | 6.42 | 67.7 | Data used for figure 3 in related manuscript | |||
| Coral colony 5 | 8.18 | 95.3 | Data used for figure 3 in related manuscript | |||
| Coral colony 5 | 7.20 | 56.7 | Data used for figure 3 in related manuscript | |||
| Coral colony 6 | 7.79 | 99.1 | Data used for figure 3 in related manuscript | |||
| Coral colony 6 | 7.70 | 135.0 | Data used for figure 3 in related manuscript | |||
| Coral colony 6 | 7.24 | 160.0 | Data used for figure 3 in related manuscript | |||
| Coral colony 6 | 6.49 | 209.0 | Data used for figure 3 in related manuscript | |||
| Coral colony 6 | 9.55 | 79.3 | Data used for figure 3 in related manuscript |