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Sanchini, Andrea (2020): Quantification of chlorophyll-a, chlorophyll–b and pheopigments-a in lake sediments through deconvolution of bulk UV-VIS absorption spectra, links to files [dataset]. University of Bern, PANGAEA, https://doi.org/10.1594/PANGAEA.914868

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Published: 2020-04-16DOI registered: 2021-03-30

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Abstract:
Assessments of aquatic paleoproduction and pigment preservation require accurate identification and quantification of sedimentary chlorophylls. Using chromatographic techniques to analyze long records at high-resolution is impractical because they are expensive and labor intensive. We have developed a new rapid and low-cost approach to infer the concentrations of chlorophyll-a, chlorophyll-b and related chlorophyll derivatives (pheopigments-a) from the mathematical decomposition of UV-VIS measured bulk spectrophotometer absorption spectra of standards and sediment extracts. We validated our method against high-performance liquid chromatography (HPLC) measurements on standard solutions and on varved, anoxic sediment from eutrophic Lake Lugano (Ponte Tresa sub-basin, southern Switzerland), where the history of productivity is relatively well known for the 20th century. Our mathematical approach quantifies the concentration of chlorophyll-b (R_(ad_J)^2=0.99; RMSEP~5.9%), chlorophyll-a (R_(ad_J)^2=0.98; RMSEP~5.0%), and pyropheophorbide-a (R_(ad_J)^2=0.99; RMSEP~7.8%) in standard solutions. We obtain comparable results for total chloropigment-a (chlorophyll-a + pheopigments-a), chlorophyll-a and diagenetic products (pheopigments-a) in the sediment samples of our case study (Ponte Tresa). Here, concentrations of chl-b were too low. The pigment stratigraphy of the Ponte Tresa sediments correspond very well with the paleoproduction and eutrophication history of the 20th century. The ratio between chlorophyll-a and pheopigments-a used as a qualitative indicator of sedimentary chlorophyll preservation (chlorophyll-a / {chlorophyll-a + pheopigments-a}) is only weakly correlated with aquatic paleoproduction (radj= 0.35, p-value=0.045) and remained remarkably constant in the recent century despite strong anthropogenic eutrophication. The new method is useful for obtaining, in a cost- and time-efficient way, information about major sedimentary pigment groups which are relevant to infer paleoproduction, potentially green algae biomass, pigment preservation and early diagenetic effects.
Keyword(s):
aquatic paleoproduction; Chlorophylls Preservation Index; deconvolution; Sedimentary pigments; UV-VIS absorption spectra
Funding:
Swiss National Science Foundation (SNF), grant/award no. 172586: Exploring VNIR/SWIR Hyperspectral Imaging of Varved Lake Sediments: Methods and Applications in Paleoclimatology and Paleoecology
Coverage:
Latitude: 45.991390 * Longitude: 8.969440
Minimum Elevation: 271.0 m * Maximum Elevation: 271.0 m
Event(s):
Lake_Lugano * Latitude: 45.991390 * Longitude: 8.969440 * Elevation: 271.0 m * Location: Switzerland * Comment: Lake area: 49 km**2; Volume: 6,500 x 10**6 m**3
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
File nameFile nameSanchini, Andrea
File formatFile formatSanchini, Andrea
File sizeFile sizekByteSanchini, Andrea
Uniform resource locator/link to fileURL fileSanchini, Andrea
Size:
28 data points

Data

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CPI_SDP_vs_Chls_hplc_fig_ESM12CSV2.117CPI_SDP_vs_Chls_hplc_fig_ESM12.csv
PTRE_Real_samples_concentrations_HPLC_SDP_chls_pheo_chl_aCSV3.771PTRE_Real_samples_concentrations_HPLC_SDP_chls_pheo_chl_a.csv
PTRE_real_sample_abs_raw_dataCSV1189.196PTRE_real_sample_abs_raw_data.csv
Synthetic_test_chl_a_vs_chl_b_abs_raw_dataCSV364.580Synthetic_test_chl_a_vs_chl_b_abs_raw_data.csv
Synthetic_test_chl_a_vs_chl_b_conc_deconvolution_vs_hplcCSV0.392Synthetic_test_chl_a_vs_chl_b_conc_deconvolution_vs_hplc.csv
Synthetic_test_chl_a_vs_pyrophide_a_abs_raw_dataCSV166.049Synthetic_test_chl_a_vs_pyrophide_a_abs_raw_data.csv
Synthetic_test_chl_a_vs_pyrophide_a_conc_deconvolution_vs_hplcCSV0.212Synthetic_test_chl_a_vs_pyrophide_a_conc_deconvolution_vs_hplc.csv