Sanchini, Andrea (2020): Quantification of chlorophyll-a, chlorophyll–b and pheopigments-a in lake sediments through deconvolution of bulk UV-VIS absorption spectra, links to files [dataset]. University of Bern, PANGAEA, https://doi.org/10.1594/PANGAEA.914868
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Published: 2020-04-16 • DOI registered: 2021-03-30
Abstract:
Assessments of aquatic paleoproduction and pigment preservation require accurate identification and quantification of sedimentary chlorophylls. Using chromatographic techniques to analyze long records at high-resolution is impractical because they are expensive and labor intensive. We have developed a new rapid and low-cost approach to infer the concentrations of chlorophyll-a, chlorophyll-b and related chlorophyll derivatives (pheopigments-a) from the mathematical decomposition of UV-VIS measured bulk spectrophotometer absorption spectra of standards and sediment extracts. We validated our method against high-performance liquid chromatography (HPLC) measurements on standard solutions and on varved, anoxic sediment from eutrophic Lake Lugano (Ponte Tresa sub-basin, southern Switzerland), where the history of productivity is relatively well known for the 20th century. Our mathematical approach quantifies the concentration of chlorophyll-b (R_(ad_J)^2=0.99; RMSEP~5.9%), chlorophyll-a (R_(ad_J)^2=0.98; RMSEP~5.0%), and pyropheophorbide-a (R_(ad_J)^2=0.99; RMSEP~7.8%) in standard solutions. We obtain comparable results for total chloropigment-a (chlorophyll-a + pheopigments-a), chlorophyll-a and diagenetic products (pheopigments-a) in the sediment samples of our case study (Ponte Tresa). Here, concentrations of chl-b were too low. The pigment stratigraphy of the Ponte Tresa sediments correspond very well with the paleoproduction and eutrophication history of the 20th century. The ratio between chlorophyll-a and pheopigments-a used as a qualitative indicator of sedimentary chlorophyll preservation (chlorophyll-a / {chlorophyll-a + pheopigments-a}) is only weakly correlated with aquatic paleoproduction (radj= 0.35, p-value=0.045) and remained remarkably constant in the recent century despite strong anthropogenic eutrophication. The new method is useful for obtaining, in a cost- and time-efficient way, information about major sedimentary pigment groups which are relevant to infer paleoproduction, potentially green algae biomass, pigment preservation and early diagenetic effects.
Keyword(s):
Funding:
Swiss National Science Foundation (SNF), grant/award no. 172586: Exploring VNIR/SWIR Hyperspectral Imaging of Varved Lake Sediments: Methods and Applications in Paleoclimatology and Paleoecology
Coverage:
Latitude: 45.991390 * Longitude: 8.969440
Minimum Elevation: 271.0 m * Maximum Elevation: 271.0 m
Event(s):
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | File name | File name | Sanchini, Andrea | |||
| 2 | File format | File format | Sanchini, Andrea | |||
| 3 | File size | File size | kByte | Sanchini, Andrea | ||
| 4 | Uniform resource locator/link to file | URL file | Sanchini, Andrea |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Size:
28 data points
Data
| 1 File name | 2 File format | 3 File size [kByte] | 4 URL file |
|---|---|---|---|
| CPI_SDP_vs_Chls_hplc_fig_ESM12 | CSV | 2.117 | CPI_SDP_vs_Chls_hplc_fig_ESM12.csv |
| PTRE_Real_samples_concentrations_HPLC_SDP_chls_pheo_chl_a | CSV | 3.771 | PTRE_Real_samples_concentrations_HPLC_SDP_chls_pheo_chl_a.csv |
| PTRE_real_sample_abs_raw_data | CSV | 1189.196 | PTRE_real_sample_abs_raw_data.csv |
| Synthetic_test_chl_a_vs_chl_b_abs_raw_data | CSV | 364.580 | Synthetic_test_chl_a_vs_chl_b_abs_raw_data.csv |
| Synthetic_test_chl_a_vs_chl_b_conc_deconvolution_vs_hplc | CSV | 0.392 | Synthetic_test_chl_a_vs_chl_b_conc_deconvolution_vs_hplc.csv |
| Synthetic_test_chl_a_vs_pyrophide_a_abs_raw_data | CSV | 166.049 | Synthetic_test_chl_a_vs_pyrophide_a_abs_raw_data.csv |
| Synthetic_test_chl_a_vs_pyrophide_a_conc_deconvolution_vs_hplc | CSV | 0.212 | Synthetic_test_chl_a_vs_pyrophide_a_conc_deconvolution_vs_hplc.csv |
