Busch, Kathrin; Beazley, Lindsay; Kenchington, Ellen L; Whoriskey, Frederick; Slaby, Beate M; Hentschel, Ute (2020): Metadata and NCBI-Accession numbers of 16S data for seawater, sediment, biofilm, and Vazella pourtalesii sponges from the Scotian Shelf (Canada) in summer 2016 and 2017 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.913907
Always quote citation above when using data! You can download the citation in several formats below.
Abstract:
Anthropogenic pressures on marine ecosystems and organisms are steadily increasing. Whether and to which extent these pressures influence marine biodiversity is only starting to unveil. Establishment of adequate conservation areas represents a challenging but crucial task in the conservation of genetic diversity and biological variability. Using 16S rRNA gene amplicon sequencing, we analysed the microbial community structure of 32 individuals of the habitat-forming glass sponge Vazella pourtalesii, as well as reference seawater, sediment, and biofilm samples. We assessed how two anthropogenic impacts, i.e. habitat destruction by trawling and artificial substrate provision (moorings made of composite plastic), correspond with in situ V. pourtalesii microbiome variability. In addition, we evaluated the role of two bottom fishery closures in preserving sponge-associated microbial diversity on the Scotian Shelf, Canada.
Keyword(s):
Supplement to:
Busch, Kathrin; Beazley, Lindsay; Kenchington, Ellen L; Whoriskey, Frederick; Slaby, Beate M; Hentschel, Ute (2020): Microbial diversity of the glass sponge Vazella pourtalesii in response to anthropogenic activities. Conservation Genetics, 21(6), 1001-1010, https://doi.org/10.1007/s10592-020-01305-2
Related to:
Bayer, Kristina; Busch, Kathrin; Kenchington, Ellen L; Beazley, Lindsay; Franzenburg, Sören; Michels, Jan; Hentschel, Ute; Slaby, Beate M (2020): Metadata and NCBI-Accession numbers of Vazella pourtalesii metagenomes from the Scotian Shelf (Canada) in summer 2017. PANGAEA, https://doi.org/10.1594/PANGAEA.917599
Project(s):
Funding:
Horizon 2020 (H2020), grant/award no. 679849: Deep-sea Sponge Grounds Ecosystems of the North Atlantic
Coverage:
Median Latitude: 44.046375 * Median Longitude: -62.944014 * South-bound Latitude: 43.871200 * West-bound Longitude: -63.204200 * North-bound Latitude: 44.320500 * East-bound Longitude: -62.601500
Date/Time Start: 2016-07-20T16:30:12 * Date/Time End: 2017-09-06T23:09:42
Minimum DEPTH, water: 155 m * Maximum DEPTH, water: 205 m
Event(s):
HUD16/19_010 * Latitude: 44.319275 * Longitude: -62.604977 * Date/Time: 2016-07-20T00:00:00 * Elevation: -200.8 m * Location: South Atlantic Ocean * Campaign: HUD2016019 * Basis: Hudson * Method/Device: Box corer (BC)
HUD16/19_012 * Latitude: 44.319632 * Longitude: -62.605143 * Date/Time: 2016-07-21T00:00:00 * Elevation: -196.6 m * Location: South Atlantic Ocean * Campaign: HUD2016019 * Basis: Hudson * Method/Device: Box corer (BC)
HUD16/19_013 * Latitude: 44.319987 * Longitude: -62.605332 * Date/Time: 2016-07-21T00:00:00 * Elevation: -200.1 m * Location: South Atlantic Ocean * Campaign: HUD2016019 * Basis: Hudson * Method/Device: Box corer (BC)
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Event label | Event | Busch, Kathrin | |||
| 2 | Station label | Station | Busch, Kathrin | |||
| 3 | DATE/TIME | Date/Time | Busch, Kathrin | Geocode | ||
| 4 | LATITUDE | Latitude | Busch, Kathrin | Geocode | ||
| 5 | LONGITUDE | Longitude | Busch, Kathrin | Geocode | ||
| 6 | Device type | Device | Busch, Kathrin | |||
| 7 | Sample code/label | Sample label | Busch, Kathrin | |||
| 8 | Sample type | Samp type | Busch, Kathrin | |||
| 9 | Sample comment | Sample comment | Busch, Kathrin | group | ||
| 10 | Identification | ID | Busch, Kathrin | |||
| 11 | Accession number, genetics | Access no gen | Busch, Kathrin | NCBI Accession number | ||
| 12 | Area/locality | Area | Busch, Kathrin | |||
| 13 | DEPTH, water | Depth water | m | Busch, Kathrin | Geocode | |
| 14 | Campaign | Campaign | Busch, Kathrin | |||
| 15 | Well-known text | WKT | Busch, Kathrin |
License:
Creative Commons Attribution 4.0 International (CC-BY-4.0)
Size:
720 data points