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Zlatkin, Rebecca L; Heuer, Rachael M (2019): Seawater carbonate chemistry and acid–base physiology and behaviour of the California sea hare (Aplysia californica) [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.912287, Supplement to: Zlatkin, RL; Heuer, RM (2019): Ocean acidification affects acid–base physiology and behaviour in a model invertebrate, the California sea hare (Aplysia californica ). Royal Society Open Science, 6(10), 191041, https://doi.org/10.1098/rsos.191041

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Abstract:
Behavioural impairment following exposure to ocean acidification-relevant CO2 levels has been noted in a broad array of taxa. The underlying cause of these disruptions is thought to stem from alterations of ion gradients ([HCO3]−/Cl−) across neuronal cell membranes that occur as a consequence of maintaining pH homeostasis via the accumulation of [HCO3]−. While behavioural impacts are widely documented, few studies have measured acid–base parameters in species showing behavioural disruptions. In addition, current studies examining mechanisms lack resolution in targeting specific neural pathways corresponding to a given behaviour. With these considerations in mind, acid–base parameters and behaviour were measured in a model organism used for decades as a research model to study learning, the California sea hare (Aplysia californica). Aplysia exposed to elevated CO2 increased haemolymph [HCO3]−, achieving full and partial pH compensation at 1200 and 3000 µatm CO2, respectively. Increased CO2 did not affect self-righting behaviour. In contrast, both levels of elevated CO2 reduced the time of the tail-withdrawal reflex, suggesting a reduction in antipredator response. Overall, these results confirm that Aplysia are promising models to examine mechanisms underlying CO2-induced behavioural disruptions since they regulate [HCO3]− and have behaviours linked to neural networks amenable to electrophysiological testing.
Keyword(s):
Acid-base regulation; Animalia; Aplysia californica; Behaviour; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Laboratory experiment; Mollusca; North Atlantic; Single species; Temperate
Original version:
Zlatkin, Rebecca L; Heuer, Rachael M (2019): Data from: Ocean acidification affects acid-base physiology and behaviour in a model invertebrate, the California sea hare (Aplysia californica). Dryad, https://doi.org/10.5061/dryad.7pd654v
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-02-17.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TypeTypeHeuer, Rachael Mstudy
SpeciesSpeciesHeuer, Rachael M
Registration number of speciesReg spec noHeuer, Rachael M
Uniform resource locator/link to referenceURL refHeuer, Rachael MWoRMS Aphia ID
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmHeuer, Rachael M
ExperimentExpHeuer, Rachael M
IdentificationIDHeuer, Rachael M
Time in secondsTimesHeuer, Rachael MTrial 1
Time in secondsTimesHeuer, Rachael MTrial 2
10 Time in secondsTimesHeuer, Rachael MTrial 3
11 Time in secondsTimesHeuer, Rachael MTime to relax tail average of three trials (s)
12 CommentCommentHeuer, Rachael MReason for no data
13 OrderOrderHeuer, Rachael M
14 Time in daysTimedaysHeuer, Rachael MExposure time
15 PercentagePerc%Heuer, Rachael MTrial 1, contracted
16 PercentagePerc%Heuer, Rachael MTrial 2, contracted
17 PercentagePerc%Heuer, Rachael MTrial 3, contracted
18 PercentagePerc%Heuer, Rachael MContracted
19 CommentCommentHeuer, Rachael MReason for no data
20 MassMassgHeuer, Rachael MBody
21 Haemolymph, pHpH (ha)Heuer, Rachael MNBS scale
22 Haemolymph, bicarbonate ion[HCO3]- (ha)mmol/lHeuer, Rachael M
23 Haemolymph, partial pressure of carbon dioxidepCO2 (ha)mm HgHeuer, Rachael M
24 Righting timeRighting timesHeuer, Rachael MTrial 1
25 Righting timeRighting timesHeuer, Rachael MTrial 2
26 Righting timeRighting timesHeuer, Rachael MTrial 3
27 Righting timeRighting timesHeuer, Rachael M
28 CommentCommentHeuer, Rachael MNote for GFR
29 IdentificationIDHeuer, Rachael MTank
30 SalinitySalHeuer, Rachael M
31 Salinity, standard errorSal std e±Heuer, Rachael M
32 Temperature, waterTemp°CHeuer, Rachael M
33 Temperature, water, standard errorT std e±Heuer, Rachael M
34 pHpHHeuer, Rachael MNBS scale
35 pH, standard errorpH std e±Heuer, Rachael MNBS scale
36 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmHeuer, Rachael MCalculated using CO2SYS
37 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard errorpCO2water_SST_wet std e±Heuer, Rachael MCalculated using CO2SYS
38 Alkalinity, totalATµmol/kgHeuer, Rachael MCalculated using CO2SYS
39 Alkalinity, total, standard errorAT std e±Heuer, Rachael MCalculated using CO2SYS
40 Carbon, inorganic, dissolvedDICµmol/kgHeuer, Rachael MCalculated using CO2SYS
41 Carbon, inorganic, dissolved, standard errorDIC std e±Heuer, Rachael MCalculated using CO2SYS
42 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
43 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
44 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
46 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
47 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
48 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
49 Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
50 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
51 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
4858 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Type
(study)

Species

Reg spec no

URL ref
(WoRMS Aphia ID)

pCO2water_SST_wet [µatm]

Exp

ID

Time [s]
(Trial 1)

Time [s]
(Trial 2)
10 
Time [s]
(Trial 3)
11 
Time [s]
(Time to relax tail average of...)
12 
Comment
(Reason for no data)
13 
Order
14 
Time [days]
(Exposure time)
15 
Perc [%]
(Trial 1, contracted)
16 
Perc [%]
(Trial 2, contracted)
17 
Perc [%]
(Trial 3, contracted)
18 
Perc [%]
(Contracted)
19 
Comment
(Reason for no data)
20 
Mass [g]
(Body)
21 
pH (ha)
(NBS scale)
22 
[HCO3]- (ha) [mmol/l]
23 
pCO2 (ha) [mm Hg]
24 
Righting time [s]
(Trial 1)
25 
Righting time [s]
(Trial 2)
26 
Righting time [s]
(Trial 3)
27 
Righting time [s]
28 
Comment
(Note for GFR)
29 
ID
(Tank)
30 
Sal
31 
Sal std e [±]
32 
Temp [°C]
33 
T std e [±]
34 
pH
(NBS scale)
35 
pH std e [±]
(NBS scale)
36 
pCO2water_SST_wet [µatm]
(Calculated using CO2SYS)
37 
pCO2water_SST_wet std e [±]
(Calculated using CO2SYS)
38 
AT [µmol/kg]
(Calculated using CO2SYS)
39 
AT std e [±]
(Calculated using CO2SYS)
40 
DIC [µmol/kg]
(Calculated using CO2SYS)
41 
DIC std e [±]
(Calculated using CO2SYS)
42 
CSC flag
(Calculated using seacarb afte...)
43 
pH
(total scale, Calculated using...)
44 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
45 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
46 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
47 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
48 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
49 
AT [µmol/kg]
(Calculated using seacarb afte...)
50 
Omega Arg
(Calculated using seacarb afte...)
51 
Omega Cal
(Calculated using seacarb afte...)
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 115.4424.007.0015.4821153.360.0060.057.7797.032.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 212.008.006.698.9021156.368.8056.360.47111.032.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 313.0028.7020.85Full contraction not observed21153.353.353.30Full contraction not observed96.532.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 422.0047.0034.50Relaxation response not clear1460.060.0040.053.33105.032.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 514.7917.7416.0016.181428.642.9053.841.7773.032.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 68.859.007.718.521458.346.2058.354.2770.032.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 726.4343.3547.3039.0321152.950.0056.353.07121.532.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 89.237.377.227.9421166.758.1060.061.60112.532.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 97.115.4827.6313.411456.360.0062.559.6097.032.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 1032.3628.8830.62Relaxation response not clear1450.056.2562.556.25106.032.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 1131.1116.1628.1825.151437.550.0053.346.93111.032.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 1218.0220.3913.8317.411453.853.8042.950.17101.532.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 1325.4621.3517.7121.511457.157.1057.157.10120.532.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 1440.5938.2538.0338.961440.040.0053.344.4381.032.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 1513.3320.2615.8316.471453.346.7046.748.9075.032.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 1628.8512.7532.3824.661461.546.7046.751.6383.032.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 1747.8031.2321.2833.441442.950.0042.945.2787.532.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 1843.0849.1650.1347.461442.942.9046.244.0081.032.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org400Tail withdrawalAnimal 1944.7211.9327.1027.921453.853.8061.556.3770.032.90.414.90.058.170.008411.318.02284.547.92081.847.00278.0515.01394.70396.131909.52152.182284.52.353.68
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 111.0012.0012.0011.671457.164.3057.159.5091.533.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 210.0016.4115.6214.011442.937.0041.740.5351.033.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 315.6616.2615.96Full contraction not observed1450.069.2059.6065.533.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 411.987.2610.599.9421150.062.1057.156.40107.033.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 58.136.7810.598.5021157.162.1060.059.73110.033.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 615.6812.5713.9814.0821153.375.0053.360.53121.033.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 742.8210.9218.2123.9821156.346.7060.054.33126.033.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 829.139.1827.5321.951460.053.3046.753.3395.533.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 912.0713.8326.0917.331450.056.3040.048.77102.033.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 109.7111.259.9210.291446.246.2053.848.7386.533.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 116.066.117.386.521460.064.3057.160.47101.033.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 1212.3611.2523.6515.751457.161.5053.857.4771.033.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 139.5313.828.8810.741446.253.8061.553.8377.533.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 1412.3821.4112.2515.351460.043.8053.352.37101.533.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 1527.3914.7615.8119.321446.261.5076.961.5377.533.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 1627.507.066.4513.671450.066.7066.761.1378.033.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org1200Tail withdrawalAnimal 1729.3725.5313.5822.831464.350.0057.157.1384.533.10.414.90.087.770.0061146.423.72394.841.22334.739.80277.6543.761152.351156.542221.5970.842394.81.091.71
laboratoryAplysia californica (mollusk)240765marinespecies.org3000Tail withdrawalAnimal 15.957.628.047.201475.062.0053.363.4387.533.10.414.90.077.360.0203014.664.62435.723.32504.824.70277.24119.813154.883166.372364.3129.312435.70.450.71
laboratoryAplysia californica (mollusk)240765marinespecies.org3000Tail withdrawalAnimal 210.007.006.837.941461.557.1069.262.6084.533.10.414.90.077.360.0203014.664.62435.723.32504.824.70277.24119.813154.883166.372364.3129.312435.70.450.71
laboratoryAplysia californica (mollusk)240765marinespecies.org3000Tail withdrawalAnimal 39.9810.038.009.341450.030.8038.539.7773.533.10.414.90.077.360.0203014.664.62435.723.32504.824.70277.24119.813154.883166.372364.3129.312435.70.450.71
laboratoryAplysia californica (mollusk)240765marinespecies.org3000Tail withdrawalAnimal 416.5811.009.0012.1921146.746.7033.342.2398.533.10.414.90.077.360.0203014.664.62435.723.32504.824.70277.24119.813154.883166.372364.3129.312435.70.450.71
laboratoryAplysia californica (mollusk)240765marinespecies.org3000Tail withdrawalAnimal 511.5913.0644.8623.1721164.344.4053.854.17113.033.10.414.90.077.360.0203014.664.62435.723.32504.824.70277.24119.813154.883166.372364.3129.312435.70.450.71
laboratoryAplysia californica (mollusk)240765marinespecies.org3000Tail withdrawalAnimal 613.1332.1633.5526.281460.046.7053.353.3395.033.10.414.90.077.360.0203014.664.62435.723.32504.824.70277.24119.813154.883166.372364.3129.312435.70.450.71
laboratoryAplysia californica (mollusk)240765marinespecies.org3000Tail withdrawalAnimal 721.7224.3624.9723.681460.046.7060.055.57107.033.10.414.90.077.360.0203014.664.62435.723.32504.824.70277.24119.813154.883166.372364.3129.312435.70.450.71
laboratoryAplysia californica (mollusk)240765marinespecies.org3000Tail withdrawalAnimal 813.5113.278.2311.671453.357.1050.053.4797.533.10.414.90.077.360.0203014.664.62435.723.32504.824.70277.24119.813154.883166.372364.3129.312435.70.450.71
laboratoryAplysia californica (mollusk)240765marinespecies.org3000Tail withdrawalAnimal 910.406.937.358.231442.960.0064.355.73106.033.10.414.90.077.360.0203014.664.62435.723.32504.824.70277.24119.813154.883166.372364.3129.312435.70.450.71
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laboratoryAplysia californica (mollusk)240765marinespecies.org3000RightingAnimal 71492.039.1540.1425.0334.771233.10.114.90.107.380.0052927.140.72423.522.12487.923.30277.26113.672993.383004.282349.1430.492423.50.470.74
laboratoryAplysia californica (mollusk)240765marinespecies.org3000RightingAnimal 81489.535.9133.5142.2839.101233.10.114.90.107.380.0052927.140.72423.522.12487.923.30277.26113.672993.383004.282349.1430.492423.50.470.74
laboratoryAplysia californica (mollusk)240765marinespecies.org3000RightingAnimal 914131.528.9320.7824.86animal did not complete the full reflex1233.10.114.90.107.380.0052927.140.72423.522.12487.923.30277.26113.672993.383004.282349.1430.492423.50.470.74
laboratoryAplysia californica (mollusk)240765marinespecies.org3000RightingAnimal 1021196.528.9521.0024.98animal did not complete the full reflex1333.10.114.90.107.380.0052927.140.72423.522.12487.923.30277.26113.672993.383004.282349.1430.492423.50.470.74
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laboratoryAplysia californica (mollusk)240765marinespecies.org3000RightingAnimal 1221173.522.7125.8712.6820.421333.10.114.90.107.380.0052927.140.72423.522.12487.923.30277.26113.672993.383004.282349.1430.492423.50.470.74
laboratoryAplysia californica (mollusk)240765marinespecies.org3000RightingAnimal 13211103.043.7541.1842.47animal did not complete the full reflex1333.10.114.90.107.380.0052927.140.72423.522.12487.923.30277.26113.672993.383004.282349.1430.492423.50.470.74