Sagonas, Kostas; Meyer, Britta S; Kaufmann, Joshka; Lenz, Tobias L; Häsler, Robert; Eizaguirre, Christophe (2020): Experiment on parasite infection: Specimens information [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.911973, In: Sagonas, K et al. (2020): Experiment on parasite infection [dataset publication series]. PANGAEA, https://doi.org/10.1594/PANGAEA.912024
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Abstract:
Contains a table with the information for each specimens used in the present study. The fish ID number (Fish_ID), the file name of Fastq raw reads of methylation sequencing that are deposited in NCBI with accession ID PRJNA605637 (Sequence_Filename), species name (Species), the family of the fish (Family_ID), the treatment (Treatment) and sex (Sex).
Parameter(s):
# | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
---|---|---|---|---|---|---|
1 | Identification | ID | Sagonas, Kostas | Fish_ID | ||
2 | File name | File name | Sagonas, Kostas | Sequence | ||
3 | Accession number, genetics | Access no gen | Sagonas, Kostas | |||
4 | Species | Species | Sagonas, Kostas | |||
5 | Identification | ID | Sagonas, Kostas | Family_ID | ||
6 | Treatment | Treat | Sagonas, Kostas | |||
7 | Sex | Sex | Sagonas, Kostas |
License:
Creative Commons Attribution-NonCommercial 4.0 International (CC-BY-NC-4.0)
Size:
364 data points
Data
1 ID (Fish_ID) | 2 File name (Sequence) | 3 Access no gen | 4 Species | 5 ID (Family_ID) | 6 Treat | 7 Sex |
---|---|---|---|---|---|---|
S10 | G04882-L1_S10_L001_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam06 | Unexposed | male |
S11 | G04883-L1_S11_L001_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam06 | Unexposed | male |
S14 | G04886-L1_S14_L001_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam06 | Exposed | male |
S16 | G04888-L1_S16_L001_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam06 | Unexposed | male |
S17 | G04889-L1_S17_L001_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam06 | Exposed | male |
S27 | G04899-L1_S27_L002_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam06 | Unexposed | male |
S32 | G04904-L1_S32_L002_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam06 | Exposed | male |
S33 | G04905-L1_S33_L002_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam06 | Exposed | male |
S35 | G04907-L1_S35_L002_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam06 | Unexposed | male |
S36 | G04908-L1_S36_L002_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam06 | Exposed | male |
S48 | G04920-L1_S48_L003_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam11 | Unexposed | male |
S52 | G04924-L1_S52_L003_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam11 | Exposed | male |
S53 | G04925-L1_S53_L003_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam11 | Unexposed | male |
S65 | G04937-L1_S65_L004_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam17 | Exposed | male |
S67 | G04939-L1_S67_L004_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam17 | Exposed | male |
S68 | G04940-L1_S68_L004_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam17 | Unexposed | male |
S69 | G04941-L1_S69_L004_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam17 | Exposed | male |
S70 | G04942-L1_S70_L004_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam17 | Exposed | male |
S71 | G04943-L1_S71_L004_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam17 | Unexposed | male |
S72 | G04944-L1_S72_L004_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam06 | Unexposed | male |
S73 | G04945-L1_S73_L005_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam06 | Exposed | male |
S74 | G04946-L1_S74_L005_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam12 | Exposed | male |
S75 | G04947-L1_S75_L005_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam12 | Unexposed | male |
S76 | G04948-L1_S76_L005_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam09 | Unexposed | male |
S77 | G04949-L1_S77_L005_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam09 | Exposed | male |
S78 | G04950-L1_S78_L005_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam11 | Unexposed | male |
S79 | G04951-L1_S79_L005_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam11 | Exposed | male |
S89 | G04961-L1_S89_L005_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam09 | Unexposed | male |
S90 | G04962-L1_S90_L005_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam09 | Unexposed | male |
S91 | G04963-L1_S91_L006_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam09 | Unexposed | male |
S93 | G04965-L1_S93_L006_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam09 | Exposed | male |
S94 | G04966-L1_S94_L006_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam09 | Unexposed | male |
S95 | G04967-L1_S95_L006_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam09 | Exposed | male |
S101 | G04973-L1_S101_L006_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam09 | Unexposed | male |
S102 | G04974-L1_S102_L006_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam09 | Unexposed | male |
S104 | G04976-L1_S104_L006_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam09 | Exposed | male |
S105 | G04977-L1_S105_L006_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam09 | Exposed | male |
S107 | G04979-L1_S107_L006_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam09 | Unexposed | male |
S108 | G04980-L1_S108_L006_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam09 | Exposed | male |
S116 | G04988-L1_S116_L007_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam11 | Unexposed | male |
S119 | G04991-L1_S119_L007_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam11 | Unexposed | male |
S123 | G04995-L1_S123_L007_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam11 | Exposed | male |
S124 | G04996-L1_S124_L007_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam11 | Exposed | male |
S125 | G04997-L1_S125_L007_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam11 | Unexposed | male |
S126 | G04998-L1_S126_L007_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam12 | Unexposed | male |
S127 | G04999-L1_S127_L008_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam12 | Exposed | male |
S135 | G05007-L1_S135_L008_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam17 | Unexposed | male |
S136 | G05008-L1_S136_L008_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam17 | Unexposed | male |
S139 | G05011-L1_S139_L008_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam17 | Exposed | male |
S141 | G05013-L1_S141_L008_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam17 | Exposed | male |
S143 | G05015-L1_S143_L008_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam17 | Unexposed | male |
S144 | G05016-L1_S144_L008_R1_001.fastq.gz | insdc:PRJNA605637 | Gasterosteus aculeatus | Fam17 | Exposed | male |