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Guscelli, Ella; Spicer, John I; Calosi, Piero (2019): Seawater carbonate chemistry and coelomic fluid,morphometric and survival data of Paracentrotus lividus [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.911818, Supplement to: Guscelli, E et al. (2019): The importance of inter‐individual variation in predicting species' responses to global change drivers. Ecology and Evolution, https://doi.org/10.1002/ece3.4810

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Abstract:
Inter‐individual variation in phenotypic traits has long been considered as "noise" rather than meaningful phenotypic variation, with biological studies almost exclusively generating and reporting average responses for populations and species' aver‐ age responses. Here, we compare the use of an individual approach in the investigation of extracellular acid-base regulation by the purple sea urchin Paracentrotus lividus challenged with elevated pCO2 and temperature conditions, with a more traditional approach which generates and formally compares mean values. We detected a high level of inter‐individual variation in acid-base regulation parameters both within and between treatments. Comparing individual and mean values for the first (apparent) dissociation constant of the coelomic fluid for individual sea urchins resulted in substantially different (calculated) acid-base parameters, and models with stronger statistical support. While the approach using means showed that coelomic pCO2 was influenced by seawater pCO2 and temperature combined, the individual approach indicated that it was in fact seawater temperature in isolation that had a significant effect on coelomic pCO2. On the other hand, coelomic [HCO3−] appeared to be primarily affected by seawater pCO2, and less by seawater temperature, irrespective of the approach adopted. As a consequence, we suggest that individual variation in physiological traits needs to be considered, and where appropriate taken into ac‐ count, in global change biology studies. It could be argued that an approach reliant on mean values is a "procedural error." It produces an artefact, that is, a population's mean phenotype. While this may allow us to conduct relatively simple statistical analyses, it will not in all cases reflect, or take into account, the degree of (physiological) diversity present in natural populations.
Keyword(s):
Acid-base regulation; Animalia; Benthic animals; Benthos; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Echinodermata; Growth/Morphology; Laboratory experiment; Mortality/Survival; North Atlantic; Paracentrotus lividus; Single species; Temperate; Temperature
Original version:
Guscelli, Ella; Spicer, John I; Calosi, Piero (2019): The importance of inter‐individual variation in predicting species' responses to global change drivers. PANGAEA, https://doi.org/10.1594/PANGAEA.898654
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb
Coverage:
Latitude: 51.552000 * Longitude: -9.720000
Date/Time Start: 2014-01-25T00:00:00 * Date/Time End: 2014-01-31T00:00:00
Event(s):
Dunmanus_Bay * Latitude: 51.552000 * Longitude: -9.720000 * Date/Time: 2014-01-20T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-02-03.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeGuscelli, Ellastudy
2SpeciesSpeciesGuscelli, Ella
3Registration number of speciesReg spec noGuscelli, Ella
4Uniform resource locator/link to referenceURL refGuscelli, EllaWoRMS Aphia ID
5Experiment durationExp durationdaysGuscelli, Ella
6IdentificationIDGuscelli, Ella
7TreatmentTreatGuscelli, Ella
8Coelomic fluid, pHpH (cf)Guscelli, Ella
9Coelomic fluid, carbon, inorganic, dissolvedDIC (cf)mmol/lGuscelli, Ella
10ConstantConstGuscelli, EllaFirst (apparent) dissociation constants for the coelomic fluid: Individual values of pK¡¯1 for Paracentrotus lividus
11Coelomic fluid, partial pressure of carbon dioxidepCO2 (cf)kPaGuscelli, EllaDetermined using individual values of pK¡¯1 for Paracentrotus lividus
12Coelomic fluid, bicarbonate ion[HCO3]- (cf)mmol/lGuscelli, EllaDetermined using individual values of pK¡¯1 for Paracentrotus lividus
13ConstantConstGuscelli, EllaFirst (apparent) dissociation constants for the coelomic fluid: Mean individual values of pK¡¯1 for Paracentrotus lividus
14Coelomic fluid, partial pressure of carbon dioxidepCO2 (cf)kPaGuscelli, EllaDetermined using mean individual values of pK¡¯1 for Paracentrotus lividus in KiloPascal
15Coelomic fluid, bicarbonate ion[HCO3]- (cf)mmol/lGuscelli, EllaDetermined using mean individual values of pK¡¯1 for Paracentrotus lividus in KiloPascal
16ConstantConstGuscelli, EllaFirst (apparent) dissociation constants for the coelomic fluid: values of pK¡¯1 for Carcinus maenas
17Coelomic fluid, partial pressure of carbon dioxidepCO2 (cf)kPaGuscelli, EllaDetermined using values of pK¡¯1 for Carcinus maenas
18Coelomic fluid, bicarbonate ion[HCO3]- (cf)mmol/lGuscelli, EllaDetermined using values of pK¡¯1 for Carcinus maenas
19HeighthmmGuscelli, Ella
20DiameterØmmGuscelli, Ella
21VolumeVolcm3Guscelli, Ella
22Wet massWet mgGuscelli, Ella
23Day of experimentDOEdayGuscelli, EllaNumber of days since the beginning of the exposition
24DATE/TIMEDate/TimeGuscelli, EllaGeocode
25IndividualsInd#Guscelli, EllaFemales still alive at this moment of the experiment on the 12 selected for each condition/generation/species
26Oxygen, dissolvedDO%Guscelli, Ella
27Oxygen, dissolved, standard errorDO std e±Guscelli, Ella
28SalinitySalGuscelli, Ella
29Salinity, standard errorSal std e±Guscelli, Ella
30Temperature, waterTemp°CGuscelli, Ella
31Temperature, water, standard errorT std e±Guscelli, Ella
32pHpHGuscelli, EllaPotentiometrictotal scale
33pH, standard errorpH std e±Guscelli, EllaPotentiometrictotal scale
34Alkalinity, totalATµmol/kgGuscelli, EllaPotentiometric titration
35Alkalinity, total, standard errorAT std e±Guscelli, EllaPotentiometric titration
36Carbon, inorganic, dissolvedDICµmol/kgGuscelli, EllaCalculated using CO2calc
37Carbon, inorganic, dissolved, standard errorDIC std e±Guscelli, EllaCalculated using CO2calc
38Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmGuscelli, EllaCalculated using CO2calc
39Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard errorpCO2water_SST_wet std e±Guscelli, EllaCalculated using CO2calc
40Bicarbonate ion[HCO3]-µmol/kgGuscelli, EllaCalculated using CO2calc
41Bicarbonate ion, standard error[HCO3]- std e±Guscelli, EllaCalculated using CO2calc
42Carbonate ion[CO3]2-µmol/kgGuscelli, EllaCalculated using CO2calc
43Carbonate ion, standard error[CO3]2- std e±Guscelli, EllaCalculated using CO2calc
44Calcite saturation stateOmega CalGuscelli, EllaCalculated using CO2calc
45Calcite saturation state, standard errorOmega Cal std e±Guscelli, EllaCalculated using CO2calc
46Aragonite saturation stateOmega ArgGuscelli, EllaCalculated using CO2calc
47Aragonite saturation state, standard errorOmega Arg std e±Guscelli, EllaCalculated using CO2calc
48Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
49Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
50Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
51Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
52Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
53Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
54Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
55Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
56Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
13132 data points

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