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Zhao, Xinguo; Han, Yu; Chen, Bijuan; Xia, Bin; Qu, Keming; Liu, Guangxu (2020): Seawater carbonate chemistry and mussel shell defense capacity of Mytilus coruscus [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.911746, Supplement to: Zhao, X et al. (2020): CO2-driven ocean acidification weakens mussel shell defense capacity and induces global molecular compensatory responses. Chemosphere, 243, 125415, https://doi.org/10.1016/j.chemosphere.2019.125415

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Abstract:
Oceanic uptake of atmospheric CO2 is reducing seawater pH and shifting carbonate chemistry within, a process termed as ocean acidification (OA). Marine mussels are a family of ecologically and economically significant bivalves that are widely distributed along coastal areas worldwide. Studies have demonstrated that OA greatly disrupts mussels' physiological functions. However, the underlying molecular responses (e.g., whether there were any molecular compensation mechanisms) and the extent to which OA affects mussel shell defense capacity remain largely unknown. In this study, the thick shell mussels Mytilus coruscus were exposed to the ambient pH (8.1) or one of two lowered pH levels (7.8 and 7.4) for 40 days. The results suggest that future OA will damage shell structure and weaken shell strength and shell closure strength, ultimately reducing mussel shell defense capacity. In addition, future OA will also disrupt haemolymph pH and Ca2+ homeostasis, leading to extracellular acidosis and Ca2+ deficiency. Mantle transcriptome analyses indicate that mussels will adopt a series of molecular compensatory responses to mitigate these adverse effects; nevertheless, weakened shell defense capacity will increase mussels' susceptibility to predators, parasites and pathogens, and thereby reduce their fitness. Overall, the findings of this study have significant ecological and economic implications, and will enhance our understanding of the future of the mussel aquaculture industry and coastal ecosystems.
Keyword(s):
Acid-base regulation; Animalia; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Growth/Morphology; Laboratory experiment; Mollusca; Mytilus coruscus; North Pacific; Other studied parameter or process; Single species; Temperate
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Hagens, Mathilde; Hofmann, Andreas; Mueller, Jens-Daniel; Proye, Aurélien; Rae, James; Soetaert, Karline (2019): seacarb: seawater carbonate chemistry with R. R package version 3.2.12. https://CRAN.R-project.org/package=seacarb
Coverage:
Latitude: 28.250000 * Longitude: 121.366600
Event(s):
Dongtou_Island_OA * Latitude: 28.250000 * Longitude: 121.366600 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-02-03.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeLiu, Guangxustudy
2SpeciesSpeciesLiu, Guangxu
3Registration number of speciesReg spec noLiu, Guangxu
4Uniform resource locator/link to referenceURL refLiu, GuangxuWoRMS Aphia ID
5Experiment durationExp durationdaysLiu, Guangxu
6TreatmentTreatLiu, Guangxu
7ReplicateReplLiu, Guangxu
8AreaArea%Liu, GuangxuCorroded area of internal shell surface
9AreaArea%Liu, GuangxuCorroded area of external shell surface
10PercentagePerc%Liu, Guangxuperiostracum discolouration
11PercentagePerc%Liu, Guangxuperiostracum breakage & lifting
12PercentagePerc%Liu, Guangxuprismatic layer dissolution
13Shell strengthShell strNLiu, Guangxu
14SizeSizeLiu, GuangxuRelative size of the posterior adductor muscle
15Haemolymph, pHpH (ha)Liu, Guangxu
16Haemolymph, calcium ionCa2+ (ha)mg/lLiu, Guangxu
17pHpHLiu, GuangxuPotentiometricNBS scale
18pH, standard deviationpH std dev±Liu, GuangxuPotentiometricNBS scale
19Temperature, waterTemp°CLiu, Guangxu
20Temperature, water, standard deviationTemp std dev±Liu, Guangxu
21SalinitySalLiu, Guangxu
22Salinity, standard deviationSal std dev±Liu, Guangxu
23Alkalinity, totalATµmol/kgLiu, GuangxuPotentiometric titration
24Alkalinity, total, standard deviationAT std dev±Liu, GuangxuPotentiometric titration
25Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmLiu, GuangxuCalculated using CO2SYS
26Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Liu, GuangxuCalculated using CO2SYS
27Carbon, inorganic, dissolvedDICµmol/kgLiu, GuangxuCalculated using CO2SYS
28Carbon, inorganic, dissolved, standard deviationDIC std dev±Liu, GuangxuCalculated using CO2SYS
29Aragonite saturation stateOmega ArgLiu, GuangxuCalculated using CO2SYS
30Aragonite saturation state, standard deviationOmega Arg std dev±Liu, GuangxuCalculated using CO2SYS
31Calcite saturation stateOmega CalLiu, GuangxuCalculated using CO2SYS
32Calcite saturation state, standard deviationOmega Cal std dev±Liu, GuangxuCalculated using CO2SYS
33Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
35Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
38Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
3177 data points

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