Citation:

PANGAEA.909581

Name: Effects of hypoxia and reoxygenation on the intermediary metabolites in the hepatopancreas tissue of Crassostrea gigas
Published: 2019-12-05
License: https://creativecommons.org/licenses/by/4.0/
Keywords: hypoxia; intertidal bivalves; metabolites; reoxygenation

Always quote citation above when using data! You can download the citation in several formats below.

Published: 2019-12-05 • DOI registered: 2020-02-12

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Keyword(s):

hypoxia; intertidal bivalves; metabolites; reoxygenation

Related to:

Haider, Fouzia; Falfushynska, Halina; Timm, Stefan; Sokolova, Inna M (2020): Effects of hypoxia and reoxygenation on intermediary metabolite homeostasis of marine bivalves Mytilus edulis and Crassostrea gigas. Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Comment
1	Species	Species		Haider, Fouzia
2	Experimental treatment	Exp treat		Haider, Fouzia	Oxic conditions
3	Tissues	Tissues		Haider, Fouzia
4	Sample ID	Sample ID		Haider, Fouzia
5	2-Aminobutyric acid	2-Aminobutyric acid	arbitrary units/mg	Haider, Fouzia	wet mass
6	4-Hydroxyproline	Hyp	arbitrary units/mg	Haider, Fouzia	wet mass
7	Adenine	Ade	arbitrary units/mg	Haider, Fouzia	wet mass
8	Adenosine	Adenosine	arbitrary units/mg	Haider, Fouzia	wet mass
9	Alanine	Ala	µg/mg	Haider, Fouzia	wet mass
10	Adenosine monophosphate	AMP	µg/mg	Haider, Fouzia	wet mass
11	Arginine	Arg	µg/mg	Haider, Fouzia	wet mass
12	Argininosuccinic acid	Argininosuccinic acid	arbitrary units/mg	Haider, Fouzia	wet mass
13	Asparagine	Asn	µg/mg	Haider, Fouzia	wet mass
14	Aspartic acid	Asp	µg/mg	Haider, Fouzia	wet mass (Aspartate)
15	Carnitine	Carnitine	µg/mg	Haider, Fouzia	wet mass
16	Choline	Choline	arbitrary units/mg	Haider, Fouzia	wet mass
17	Citrate/Isocitrate	Citrate/Isocitrate	µg/mg	Haider, Fouzia	wet mass
18	Cytidine	Cytidine	arbitrary units/mg	Haider, Fouzia	wet mass
19	Cytidine monophosphate	CMP	arbitrary units/mg	Haider, Fouzia	wet mass
20	Cytosine	Cytosine	arbitrary units/mg	Haider, Fouzia	wet mass
21	Cystine	Cystine	µg/mg	Haider, Fouzia	wet mass
22	gamma-Aminobutyric acid	g-ABA	µg/mg	Haider, Fouzia	wet mass
23	Glutathione	GSH	µg/mg	Haider, Fouzia	wet mass
24	Glutamic acid	Glu	µg/mg	Haider, Fouzia	wet mass (Glutamate)
25	Glutamine	Gln	µg/mg	Haider, Fouzia	wet mass
26	Glycine	Gly	µg/mg	Haider, Fouzia	wet mass
27	Guanosine monophosphate	GMP	arbitrary units/mg	Haider, Fouzia	wet mass
28	Histamine	Histamine	arbitrary units/mg	Haider, Fouzia	wet mass
29	Histidine	His	µg/mg	Haider, Fouzia	wet mass
30	Homocysteine	Homocysteine	arbitrary units/mg	Haider, Fouzia	wet mass
31	Homocystine	Homocystine	arbitrary units/mg	Haider, Fouzia	wet mass
32	Hypoxanthine	Hypoxanthine	arbitrary units/mg	Haider, Fouzia	wet mass
33	Inosine	Inosine	arbitrary units/mg	Haider, Fouzia	wet mass
34	Isoleucine	Ile	µg/mg	Haider, Fouzia	wet mass
35	Leucine	Leu	µg/mg	Haider, Fouzia	wet mass
36	Lysine	Lys	µg/mg	Haider, Fouzia	wet mass
37	Malate	Malate	µg/mg	Haider, Fouzia	wet mass
38	Methionine	Met	µg/mg	Haider, Fouzia	wet mass
39	Methionine sulfoxide	Methionine sulfoxide	arbitrary units/mg	Haider, Fouzia	wet mass
40	Nicotinic acid	Nicotinic acid	arbitrary units/mg	Haider, Fouzia	wet mass
41	Ornithine	Ornithine	arbitrary units/mg	Haider, Fouzia	wet mass
42	Phenylalanine	Phe	µg/mg	Haider, Fouzia	wet mass
43	Proline	Pro	µg/mg	Haider, Fouzia	wet mass
44	S-Adenosylhomocysteine	SAH	arbitrary units/mg	Haider, Fouzia	wet mass
45	Serine	Ser	µg/mg	Haider, Fouzia	wet mass
46	Succinate	Succinate	µg/mg	Haider, Fouzia	wet mass
47	Threonine	Thr	µg/mg	Haider, Fouzia	wet mass
48	Thymidine monophosphate	TMP	arbitrary units/mg	Haider, Fouzia	wet mass
49	Tryptophan	Trp	µg/mg	Haider, Fouzia	wet mass
50	Tyrosine	Tyr	µg/mg	Haider, Fouzia	wet mass
51	Uracil	Uracil	arbitrary units/mg	Haider, Fouzia	wet mass
52	Valine	Val	µg/mg	Haider, Fouzia	wet mass

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Size:

1040 data points

Data

Download dataset as tab-delimited text — use the following character encoding:

1 Species	2 Exp treat	3 Tissues	4 Sample ID	5 2-Aminobutyric acid [arbitrary units/mg]	6 Hyp [arbitrary units/mg]	7 Ade [arbitrary units/mg]	8 Adenosine [arbitrary units/mg]	9 Ala [µg/mg]	10 AMP [µg/mg]	11 Arg [µg/mg]	12 Argininosuccinic acid [arbitrary units/mg]	13 Asn [µg/mg]	14 Asp [µg/mg]	15 Carnitine [µg/mg]	16 Choline [arbitrary units/mg]	17 Citrate/Isocitrate [µg/mg]	18 Cytidine [arbitrary units/mg]	19 CMP [arbitrary units/mg]	20 Cytosine [arbitrary units/mg]	21 Cystine [µg/mg]	22 g-ABA [µg/mg]	23 GSH [µg/mg]	24 Glu [µg/mg]	25 Gln [µg/mg]	26 Gly [µg/mg]	27 GMP [arbitrary units/mg]	28 Histamine [arbitrary units/mg]	29 His [µg/mg]	30 Homocysteine [arbitrary units/mg]	31 Homocystine [arbitrary units/mg]	32 Hypoxanthine [arbitrary units/mg]	33 Inosine [arbitrary units/mg]	34 Ile [µg/mg]	35 Leu [µg/mg]	36 Lys [µg/mg]	37 Malate [µg/mg]	38 Met [µg/mg]	39 Methionine sulfoxide [arbitrary units/mg]	40 Nicotinic acid [arbitrary units/mg]	41 Ornithine [arbitrary units/mg]	42 Phe [µg/mg]	43 Pro [µg/mg]	44 SAH [arbitrary units/mg]	45 Ser [µg/mg]	46 Succinate [µg/mg]	47 Thr [µg/mg]	48 TMP [arbitrary units/mg]	49 Trp [µg/mg]	50 Tyr [µg/mg]	51 Uracil [arbitrary units/mg]	52 Val [µg/mg]
Crassostrea gigas	Control	Hepatopancreas	C1 OHP 1	91.697	368.386	43.250	694.836	0.290706	0.066040	0.157819	207.027	0.008659	0.209085	0.073652	1373.413	0.340995	234.339	74.426	29.680	0.003057	0.016770	0.000078	0.474998	0.068781	0.253940	166.911	39.793	0.038532	3.546	21.063	1109.802	24.535	0.021979	0.029473	0.097504	0.099072	0.011000	26.171	144.384	1358.657	0.025654	0.182622	36.703	0.067416	0.185856	0.031050	6.406	0.005483	0.017670	81.099	0.027707
Crassostrea gigas	Control	Hepatopancreas	C1 OHP 2	124.301	527.916	30.600	352.526	0.283221	0.011905	0.078466	83.744	0.004436	0.132042	0.069429	1469.466	0.042230	295.226	26.666	45.796	0.004825	0.008023	0.000085	0.321749	0.057877	0.342600	87.239	44.847	0.030675	5.430	14.907	1203.409	10.950	0.018378	0.025241	0.061994	0.048521	0.015643	28.177	65.191	712.348	0.023061	0.142889	37.243	0.066759	0.132249	0.038152	5.729	0.004338	0.013242	97.519	0.027482
Crassostrea gigas	Control	Hepatopancreas	C1 OHP 3	120.715	646.979	62.884	1182.469	0.254783	0.047824	0.072932	44.786	0.007752	0.120893	0.035454	947.334	0.069964	159.658	26.412	29.970	0.024170	0.011211	0.000024	0.260955	0.051836	0.336721	79.927	25.725	0.030679	2.947	45.323	777.142	39.316	0.015463	0.021584	0.050146	0.039273	0.010188	15.157	93.716	639.807	0.018631	0.166033	31.818	0.066008	0.090762	0.031996	3.392	0.004469	0.012412	71.019	0.022651
Crassostrea gigas	Control	Hepatopancreas	C1 OHP 4	127.808	405.814	106.314	1990.372	0.318256	0.055125	0.150140	78.439	0.037492	0.183699	0.063886	1380.394	0.207890	211.884	30.576	35.989	0.010012	0.016080	0.000090	0.363684	0.042419	0.374638	112.421	34.450	0.053438	4.156	73.137	1032.055	63.942	0.021608	0.028487	0.055311	0.050851	0.012460	16.752	76.109	794.953	0.027995	0.156581	82.395	0.085152	0.168376	0.026216	21.677	0.005050	0.014631	106.431	0.029000
Crassostrea gigas	Control	Hepatopancreas	C1 OHP 5	171.907	584.181	82.818	1481.187	0.376406	0.072262	0.148959	80.729	0.009555	0.194366	0.090226	1502.181	0.443859	180.815	29.206	30.192	0.005760	0.008953	0.000085	0.370022	0.068101	0.409838	80.792	31.591	0.062799	3.998	55.395	1411.752	49.384	0.033263	0.043036	0.075187	0.113925	0.020947	23.358	335.405	1238.669	0.036158	0.184017	89.644	0.078630	0.253179	0.028627	14.243	0.009361	0.022926	132.120	0.037269
Crassostrea gigas	Control	Hepatopancreas	C1 OHP 6	150.964	394.598	36.196	540.264	0.258903	0.017774	0.198305	61.933	0.008118	0.127158	0.063022	1179.693	0.081442	413.915	23.194	57.043	0.002596	0.005161	0.000050	0.280570	0.071774	0.312099	50.220	72.818	0.051782	3.922	23.725	1020.488	17.465	0.024600	0.034174	0.073372	0.049049	0.018817	29.482	79.756	1130.960	0.028521	0.183011	55.291	0.083065	0.130733	0.037206	12.046	0.007362	0.018236	90.539	0.032691
Crassostrea gigas	1d Hypoxia	Hepatopancreas	H1 OHP 1	121.124	349.033	81.341	1671.521	0.311749	0.039426	0.117112	96.516	0.005188	0.165707	0.041187	900.886	0.024919	265.224	26.858	30.953	0.008928	0.005261	0.000109	0.399272	0.052217	0.430768	70.072	33.955	0.040145	6.285	60.258	971.911	55.661	0.026175	0.035055	0.070544	0.047191	0.018179	18.645	126.751	582.676	0.036085	0.148002	62.862	0.074464	0.273726	0.038404	3.319	0.007237	0.019296	95.493	0.034765
Crassostrea gigas	1d Hypoxia	Hepatopancreas	H1 OHP 2	251.319	611.280	157.884	2661.772	0.341021	0.062720	0.186387	128.062	0.027098	0.131186	0.069383	1185.544	0.049895	180.204	33.632	35.279	0.005538	0.013652	0.000121	0.408241	0.091216	0.577273	96.970	38.733	0.077127	5.385	99.074	889.363	77.863	0.033591	0.041399	0.092234	0.050975	0.016989	24.216	125.779	1051.213	0.037102	0.205505	84.464	0.107786	0.346813	0.052704	2.315	0.009626	0.025493	107.825	0.042658
Crassostrea gigas	1d Hypoxia	Hepatopancreas	H1 OHP 3	324.919	719.430	121.423	2191.602	0.343876	0.063408	0.185294	122.142	0.024568	0.133680	0.068806	760.179	0.054261	215.271	36.632	26.792	0.006045	0.013251	0.000152	0.467412	0.108073	0.615644	92.241	25.907	0.086591	3.987	82.751	882.805	62.437	0.035313	0.043944	0.091729	0.060547	0.015145	20.461	94.990	1066.615	0.039076	0.190208	57.209	0.100507	0.420016	0.060816	4.386	0.011182	0.025793	101.253	0.043678
Crassostrea gigas	1d Hypoxia	Hepatopancreas	H1 OHP 4	267.137	782.504	131.418	2485.159	0.400104	0.074483	0.185928	99.361	0.009228	0.093825	0.073549	901.789	0.112276	229.591	42.089	33.302	0.008740	0.040874	0.000156	0.385626	0.037970	0.540973	113.454	37.452	0.057607	2.845	101.662	897.482	79.421	0.028433	0.034842	0.063613	0.055445	0.010932	10.656	88.780	735.387	0.033408	0.281664	65.725	0.090367	0.447640	0.045238	4.404	0.008432	0.020419	104.160	0.036091
Crassostrea gigas	1d Hypoxia	Hepatopancreas	H1 OHP 5	204.805	577.426	131.709	2646.548	0.478738	0.124034	0.135210	135.575	0.022307	0.187052	0.118549	1636.166	0.060833	304.432	63.506	46.140	0.013558	0.028630	0.000130	0.607219	0.045120	0.439679	209.701	46.816	0.045391	5.779	122.670	1210.574	85.751	0.034352	0.040424	0.090132	0.053376	0.011628	16.128	171.196	847.647	0.041261	0.281777	80.172	0.080691	0.557628	0.045158	4.529	0.009880	0.025151	118.425	0.043204
Crassostrea gigas	1d Hypoxia	Hepatopancreas	H1 OHP 6	234.222	455.636	228.983	4334.036	0.372305	0.085236	0.186723	91.457	0.014313	0.208870	0.060389	1270.984	0.273203	206.962	42.093	27.850	0.007191	0.014140	0.000133	0.439700	0.051907	0.514202	154.650	27.193	0.053426	8.495	166.412	976.698	131.173	0.035577	0.042941	0.080568	0.071473	0.014144	18.947	93.325	1095.058	0.038829	0.212119	94.596	0.080135	0.474837	0.052170	5.412	0.012135	0.025631	120.677	0.047274
Crassostrea gigas	1h Reoxygenation after 1d hypoxia	Hepatopancreas	R1 OHP 1	312.043	694.152	109.038	1929.355	0.499914	0.090845	0.391363	179.526	0.015442	0.141794	0.123802	1361.501	0.147534	242.629	61.674	33.813	0.004419	0.021280	0.000105	0.578792	0.069283	0.622587	149.427	37.103	0.063484	3.911	69.184	1302.365	61.661	0.027281	0.036218	0.095843	0.086330	0.017650	17.341	147.235	1410.297	0.031357	0.337194	59.048	0.107197	0.408313	0.043960	16.443	0.006587	0.019233	128.031	0.035966
Crassostrea gigas	1h Reoxygenation after 1d hypoxia	Hepatopancreas	R1 OHP 2	215.788	462.190	134.012	2228.009	0.415338	0.054225	0.184517	130.839	0.011161	0.067505	0.058510	885.631	0.044927	235.993	33.788	20.830	0.006882	0.005334	0.000064	0.405543	0.034219	0.482952	94.418	39.516	0.042433	4.763	89.801	821.266	71.456	0.025833	0.033699	0.063014	0.037903	0.010659	16.585	109.437	1009.933	0.025701	0.241847	51.193	0.101824	0.205102	0.046618	5.297	0.006118	0.019254	85.977	0.036778
Crassostrea gigas	1h Reoxygenation after 1d hypoxia	Hepatopancreas	R1 OHP 3	146.792	479.706	82.237	1472.414	0.306064	0.042027	0.226218	146.974	0.011450	0.092452	0.056033	1185.108	0.020464	188.261	34.623	31.690	0.008427	0.005119	0.000062	0.402107	0.045405	0.529031	75.457	33.837	0.053997	4.356	52.176	931.821	48.318	0.024420	0.031497	0.065741	0.033823	0.020412	19.809	47.653	888.134	0.029032	0.210490	52.284	0.097976	0.189003	0.039635	7.273	0.006662	0.017725	116.679	0.031412
Crassostrea gigas	1h Reoxygenation after 1d hypoxia	Hepatopancreas	R1 OHP 4	200.061	823.116	128.410	2489.901	0.458259	0.064995	0.448881	142.631	0.007862	0.037866	0.053010	1396.846	0.051849	185.131	24.670	29.876	0.003285	0.017338	0.000166	0.414641	0.032424	0.334081	70.754	24.892	0.058502	2.588	100.413	974.169	80.477	0.035028	0.049713	0.094277	0.082003	0.023288	15.960	232.286	770.186	0.046256	0.296502	72.574	0.091261	0.309513	0.042913	25.386	0.009036	0.024877	76.604	0.047784
Crassostrea gigas	6d Hypoxia	Hepatopancreas	H6 OHP 1	250.684	897.122	179.157	3113.507	0.575750	0.117618	0.243508	145.740	0.007240	0.061882	0.039226	1472.221	0.128642	233.920	47.142	32.360	0.008017	0.019341	0.000128	0.448309	0.038558	0.576694	133.816	38.172	0.046919	3.088	118.111	1331.601	106.884	0.074085	0.072388	0.131543	0.112567	0.013033	13.292	121.155	1041.072	0.078500	0.385190	168.748	0.052552	0.466817	0.071536	5.784	0.021834	0.045424	113.346	0.080913
Crassostrea gigas	6d Hypoxia	Hepatopancreas	H6 OHP 2	157.772	606.677	119.557	1943.964	0.329018	0.061625	0.226002	52.223	0.006423	0.016361	0.016408	611.907	0.021539	107.032	21.363	18.440	0.001745	0.005369	0.000065	0.239566	0.014323	0.251600	54.205	11.051	0.041912	1.265	84.327	537.372	61.955	0.036554	0.041233	0.078289	0.026950	0.004174	3.509	106.437	1092.560	0.040952	0.359722	83.664	0.051398	0.192740	0.043149	1.602	0.011985	0.025974	82.709	0.043726
Crassostrea gigas	6d Hypoxia	Hepatopancreas	H6 OHP 3	242.808	522.315	149.324	2511.498	0.439603	0.102692	0.176561	88.899	0.003946	0.048840	0.054052	1349.241	0.038642	209.546	41.117	32.418	0.007565	0.005552	0.000072	0.392259	0.020020	0.324650	105.744	26.888	0.055222	1.748	98.252	909.907	84.624	0.054426	0.060071	0.132633	0.032145	0.010287	9.678	100.898	1157.495	0.052980	0.298767	92.567	0.100739	0.170569	0.064629	3.705	0.019625	0.039281	121.068	0.073397
Crassostrea gigas	6d Hypoxia	Hepatopancreas	H6 OHP 4	161.213	407.435	161.916	2949.048	0.418788	0.109561	0.179329	104.888	0.002099	0.050268	0.041680	1712.496	0.099085	169.676	38.139	28.989	0.012528	0.014074	0.000043	0.335755	0.015666	0.295652	118.814	34.014	0.042047	1.418	115.504	703.175	100.241	0.060764	0.060252	0.128289	0.028866	0.007586	12.541	65.751	1103.514	0.064619	0.221115	149.363	0.069108	0.215217	0.050823	3.181	0.018429	0.039794	151.725	0.071607