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Data Publisher for Earth & Environmental Science

Liu, Yangyang; Wiegmann, Sonja; Bracher, Astrid (2019): Standard deviation of optical density by all particles during POLARSTERN cruise PS99 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.907654, In supplement to: Liu, Yangyang; Boss, Emmanuel; Chase, Alison P; Xi, Hongyan; Zhang, Xiaodong; Röttgers, Rüdiger; Pan, Yanqun; Bracher, Astrid (2019): Retrieval of phytoplankton pigments from underway spectrophotometry in the Fram Strait. Remote Sensing, 11(3), 318, https://doi.org/10.3390/rs11030318

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Abstract:
Absorption coefficients (abs) and optical density (OD) by total particles, phytoplankton and non-algal particles (NAP) were measured with standard deviation (sd) estimated on water samples collected from underway AC-S flow-through system outflow and CTD. Measurements were performed using QFT-ICAM (Röttgers et al., 2016) as described in Liu et al. (2018) and Liu et al. (2019).
1. About sampling:
a) underway samples were collected from unfiltered AC-S outflow (depth: 11m); CTD samples with 5-6 depths were collected on upcast.
b) vacuum pressure for filtration: maximum 200 hPa
c) samples were measured fresh (not preserved).
d) blank filters were collected by soaking them in 0.2um filtered seawater.
e) replicates were not collected.
2. About measurements:
a) Instrument: light source: UV-VIS lamp (CF-1000- HC lamp, Illumination Technology, USA); absorption meter: Quantitative Filter Technique - Integrating Cavity Absorption Meter (QFT-ICAM) (Röttgers et al., 2016) with 80 mm- diameter integrating sphere; detector: photodiode array spectrometer (AVASPEC-ULS2048-RS-USB2, Avantes, the Netherlands).
b) wavelength range of scan and resolution: 313.5-875.7 nm, 0.3 nm.
c) slit band width: 2 nm.
d) sample filters were bleached with 10% sodium hypochlorite (NaClO) solution for the OD measurement of NAP.
e) samples were measured for four times and bleached samples were measured twice.
f) dark current and blank filters were measured and subtracted.
3. About data analysis:
a) interpolated wavelength range and resolution: 320-844 nm, 2nm.
b) wavelength range for fluorescence correction: 670:800 nm.
c) diameter of sample patch on GF/F filter: 2.133 cm.
d) pathlength amplification factor (beta correction factor): 4.06 (Röttgers et al., 2016).
e) no scattering correction for total particle absorption is applied; NAP absorption was adjusted with an offset in the range of 710-750 nm so that the median value of NAP absorption equals the median value of in total particle absorption in this spectral range. This adjustment is based on the assumption that phytoplankton pigments do not absorb in near-infrared (Neeley et al., 2018). This adjustment was not applied to NAP OD data.
f) NAP absorption data from underway samples collected during 2016-06-17T21:20, 2016-06-18T00:26, 2016-06-18T03:19, 2016-06-18T06:38, 2016-06-15T12:12, and 2016-06-15T15:09 were missing. To calculate the corresponding phytoplankton absorption, the missing NAP data were taken the same as the ones from 2016-06-17T18:13, 2016-06-18T18:09, 2016-06-18T18:09, 2016-06-18T18:09, 2016-06-15T09:15, and 2016-06-15T09:15, respectively. However, this was not applied to NAP OD data.
Keyword(s):
absorption; non-algal particles; optical density; particulate matter; Phytoplankton
Related to:
Liu, Yangyang; Röttgers, Rüdiger; Ramírez-Pérez, Marta; Dinter, Tilman; Steinmetz, Francois; Nöthig, Eva-Maria; Hellmann, Sebastian; Wiegmann, Sonja; Bracher, Astrid (2018): Underway spectrophotometry in the Fram Strait (European Arctic Ocean): a highly resolved chlorophyll a data source for complementing satellite ocean color. Optics Express, 26(14), A678-A696, https://doi.org/10.1364/OE.26.00A678
Neeley, Aimee; Mannino, Antonio; Boss, Emmanuel; D'Sa, Eurico J; Freeman, Scott; Fry, Ed; Mueller, James L; Pegau, Scott; Reynolds, Rick A; Roesler, Collin S; Röttgers, Rüdiger; Stramski, Dariusz; Twardowski, Michael S (2018): Ocean Optics and Biogeochemistry Protocols for Satellite Ocean Colour Sensor Validation; Volume 1.0. Inherent Optical Property Measurements and Protocols: Absorption Coefficient. International Ocean Colour Coordinating Group (IOCCG), https://doi.org/10.25607/OBP-119
Röttgers, Rüdiger; Doxaran, David; Dupouy, Cécile (2016): Quantitative filter technique measurements of spectral light absorption by aquatic particles using a portable integrating cavity absorption meter (QFT-ICAM). Optics Express, 24(2), A1, https://doi.org/10.1364/OE.24.0000A1
Funding:
German Research Foundation (DFG), grant/award no. 268020496: TRR 172: ArctiC Amplification: Climate Relevant Atmospheric and SurfaCe Processes, and Feedback Mechanisms
Coverage:
Median Latitude: 77.143306 * Median Longitude: 6.096293 * South-bound Latitude: 56.769550 * West-bound Longitude: -5.409330 * North-bound Latitude: 80.002133 * East-bound Longitude: 18.236670
Date/Time Start: 2016-06-14T15:12:00 * Date/Time End: 2016-07-12T12:30:00
Minimum DEPTH, water: 5.00 m * Maximum DEPTH, water: 100.00 m
Event(s):
PS99.1-track * Latitude Start: 53.563960 * Longitude Start: 8.548130 * Latitude End: 78.300000 * Longitude End: 15.650000 * Date/Time Start: 2016-06-13T00:00:00 * Date/Time End: 2016-06-22T00:00:00 * Campaign: PS99.1 (ARK-XXX/1.1) * Basis: Polarstern * Method/Device: Underway cruise track measurements (CT)
PS99.2-track * Latitude Start: 78.300000 * Longitude Start: 15.650000 * Latitude End: 69.678000 * Longitude End: 18.989800 * Date/Time Start: 2016-06-23T00:00:00 * Date/Time End: 2016-07-16T00:00:00 * Campaign: PS99.2 (ARK-XXX/1.2) * Basis: Polarstern * Method/Device: Underway cruise track measurements (CT)
PS99/002-1 * Latitude: 74.858670 * Longitude: 16.098500 * Date/Time: 2016-06-19T05:22:00 * Elevation: -375.8 m * Location: Norwegian Sea * Campaign: PS99.1 (ARK-XXX/1.1) * Basis: Polarstern * Method/Device: CTD/Rosette (CTD-RO)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventLiu, Yangyang
2DATE/TIMEDate/TimeLiu, YangyangGeocode
3Sample IDSample IDLiu, Yangyang
4LATITUDELatitudeLiu, YangyangGeocode
5LONGITUDELongitudeLiu, YangyangGeocode
6DEPTH, waterDepth watermLiu, YangyangGeocode
7Sample volumeSamp vollLiu, Yangyangfiltration volume
8Density, optical standard deviationOD std dev±Liu, Yangyang350 nm
9Density, optical standard deviationOD std dev±Liu, Yangyang352 nm
10Density, optical standard deviationOD std dev±Liu, Yangyang354 nm
11Density, optical standard deviationOD std dev±Liu, Yangyang356 nm
12Density, optical standard deviationOD std dev±Liu, Yangyang358 nm
13Density, optical standard deviationOD std dev±Liu, Yangyang360 nm
14Density, optical standard deviationOD std dev±Liu, Yangyang362 nm
15Density, optical standard deviationOD std dev±Liu, Yangyang364 nm
16Density, optical standard deviationOD std dev±Liu, Yangyang366 nm
17Density, optical standard deviationOD std dev±Liu, Yangyang368 nm
18Density, optical standard deviationOD std dev±Liu, Yangyang370 nm
19Density, optical standard deviationOD std dev±Liu, Yangyang372 nm
20Density, optical standard deviationOD std dev±Liu, Yangyang374 nm
21Density, optical standard deviationOD std dev±Liu, Yangyang376 nm
22Density, optical standard deviationOD std dev±Liu, Yangyang378 nm
23Density, optical standard deviationOD std dev±Liu, Yangyang380 nm
24Density, optical standard deviationOD std dev±Liu, Yangyang382 nm
25Density, optical standard deviationOD std dev±Liu, Yangyang384 nm
26Density, optical standard deviationOD std dev±Liu, Yangyang386 nm
27Density, optical standard deviationOD std dev±Liu, Yangyang388 nm
28Density, optical standard deviationOD std dev±Liu, Yangyang390 nm
29Density, optical standard deviationOD std dev±Liu, Yangyang392 nm
30Density, optical standard deviationOD std dev±Liu, Yangyang394 nm
31Density, optical standard deviationOD std dev±Liu, Yangyang396 nm
32Density, optical standard deviationOD std dev±Liu, Yangyang398 nm
33Density, optical standard deviationOD std dev±Liu, Yangyang400 nm
34Density, optical standard deviationOD std dev±Liu, Yangyang402 nm
35Density, optical standard deviationOD std dev±Liu, Yangyang404 nm
36Density, optical standard deviationOD std dev±Liu, Yangyang406 nm
37Density, optical standard deviationOD std dev±Liu, Yangyang408 nm
38Density, optical standard deviationOD std dev±Liu, Yangyang410 nm
39Density, optical standard deviationOD std dev±Liu, Yangyang412 nm
40Density, optical standard deviationOD std dev±Liu, Yangyang414 nm
41Density, optical standard deviationOD std dev±Liu, Yangyang416 nm
42Density, optical standard deviationOD std dev±Liu, Yangyang418 nm
43Density, optical standard deviationOD std dev±Liu, Yangyang420 nm
44Density, optical standard deviationOD std dev±Liu, Yangyang422 nm
45Density, optical standard deviationOD std dev±Liu, Yangyang424 nm
46Density, optical standard deviationOD std dev±Liu, Yangyang426 nm
47Density, optical standard deviationOD std dev±Liu, Yangyang428 nm
48Density, optical standard deviationOD std dev±Liu, Yangyang430 nm
49Density, optical standard deviationOD std dev±Liu, Yangyang432 nm
50Density, optical standard deviationOD std dev±Liu, Yangyang434 nm
51Density, optical standard deviationOD std dev±Liu, Yangyang436 nm
52Density, optical standard deviationOD std dev±Liu, Yangyang438 nm
53Density, optical standard deviationOD std dev±Liu, Yangyang440 nm
54Density, optical standard deviationOD std dev±Liu, Yangyang442 nm
55Density, optical standard deviationOD std dev±Liu, Yangyang444 nm
56Density, optical standard deviationOD std dev±Liu, Yangyang446 nm
57Density, optical standard deviationOD std dev±Liu, Yangyang448 nm
58Density, optical standard deviationOD std dev±Liu, Yangyang450 nm
59Density, optical standard deviationOD std dev±Liu, Yangyang452 nm
60Density, optical standard deviationOD std dev±Liu, Yangyang454 nm
61Density, optical standard deviationOD std dev±Liu, Yangyang456 nm
62Density, optical standard deviationOD std dev±Liu, Yangyang458 nm
63Density, optical standard deviationOD std dev±Liu, Yangyang460 nm
64Density, optical standard deviationOD std dev±Liu, Yangyang462 nm
65Density, optical standard deviationOD std dev±Liu, Yangyang464 nm
66Density, optical standard deviationOD std dev±Liu, Yangyang466 nm
67Density, optical standard deviationOD std dev±Liu, Yangyang468 nm
68Density, optical standard deviationOD std dev±Liu, Yangyang470 nm
69Density, optical standard deviationOD std dev±Liu, Yangyang472 nm
70Density, optical standard deviationOD std dev±Liu, Yangyang474 nm
71Density, optical standard deviationOD std dev±Liu, Yangyang476 nm
72Density, optical standard deviationOD std dev±Liu, Yangyang478 nm
73Density, optical standard deviationOD std dev±Liu, Yangyang480 nm
74Density, optical standard deviationOD std dev±Liu, Yangyang482 nm
75Density, optical standard deviationOD std dev±Liu, Yangyang484 nm
76Density, optical standard deviationOD std dev±Liu, Yangyang486 nm
77Density, optical standard deviationOD std dev±Liu, Yangyang488 nm
78Density, optical standard deviationOD std dev±Liu, Yangyang490 nm
79Density, optical standard deviationOD std dev±Liu, Yangyang492 nm
80Density, optical standard deviationOD std dev±Liu, Yangyang494 nm
81Density, optical standard deviationOD std dev±Liu, Yangyang496 nm
82Density, optical standard deviationOD std dev±Liu, Yangyang498 nm
83Density, optical standard deviationOD std dev±Liu, Yangyang500 nm
84Density, optical standard deviationOD std dev±Liu, Yangyang502 nm
85Density, optical standard deviationOD std dev±Liu, Yangyang504 nm
86Density, optical standard deviationOD std dev±Liu, Yangyang506 nm
87Density, optical standard deviationOD std dev±Liu, Yangyang508 nm
88Density, optical standard deviationOD std dev±Liu, Yangyang510 nm
89Density, optical standard deviationOD std dev±Liu, Yangyang512 nm
90Density, optical standard deviationOD std dev±Liu, Yangyang514 nm
91Density, optical standard deviationOD std dev±Liu, Yangyang516 nm
92Density, optical standard deviationOD std dev±Liu, Yangyang518 nm
93Density, optical standard deviationOD std dev±Liu, Yangyang520 nm
94Density, optical standard deviationOD std dev±Liu, Yangyang522 nm
95Density, optical standard deviationOD std dev±Liu, Yangyang524 nm
96Density, optical standard deviationOD std dev±Liu, Yangyang526 nm
97Density, optical standard deviationOD std dev±Liu, Yangyang528 nm
98Density, optical standard deviationOD std dev±Liu, Yangyang530 nm
99Density, optical standard deviationOD std dev±Liu, Yangyang532 nm
100Density, optical standard deviationOD std dev±Liu, Yangyang534 nm
101Density, optical standard deviationOD std dev±Liu, Yangyang536 nm
102Density, optical standard deviationOD std dev±Liu, Yangyang538 nm
103Density, optical standard deviationOD std dev±Liu, Yangyang540 nm
104Density, optical standard deviationOD std dev±Liu, Yangyang542 nm
105Density, optical standard deviationOD std dev±Liu, Yangyang544 nm
106Density, optical standard deviationOD std dev±Liu, Yangyang546 nm
107Density, optical standard deviationOD std dev±Liu, Yangyang548 nm
108Density, optical standard deviationOD std dev±Liu, Yangyang550 nm
109Density, optical standard deviationOD std dev±Liu, Yangyang552 nm
110Density, optical standard deviationOD std dev±Liu, Yangyang554 nm
111Density, optical standard deviationOD std dev±Liu, Yangyang556 nm
112Density, optical standard deviationOD std dev±Liu, Yangyang558 nm
113Density, optical standard deviationOD std dev±Liu, Yangyang560 nm
114Density, optical standard deviationOD std dev±Liu, Yangyang562 nm
115Density, optical standard deviationOD std dev±Liu, Yangyang564 nm
116Density, optical standard deviationOD std dev±Liu, Yangyang566 nm
117Density, optical standard deviationOD std dev±Liu, Yangyang568 nm
118Density, optical standard deviationOD std dev±Liu, Yangyang570 nm
119Density, optical standard deviationOD std dev±Liu, Yangyang572 nm
120Density, optical standard deviationOD std dev±Liu, Yangyang574 nm
121Density, optical standard deviationOD std dev±Liu, Yangyang576 nm
122Density, optical standard deviationOD std dev±Liu, Yangyang578 nm
123Density, optical standard deviationOD std dev±Liu, Yangyang580 nm
124Density, optical standard deviationOD std dev±Liu, Yangyang582 nm
125Density, optical standard deviationOD std dev±Liu, Yangyang584 nm
126Density, optical standard deviationOD std dev±Liu, Yangyang586 nm
127Density, optical standard deviationOD std dev±Liu, Yangyang588 nm
128Density, optical standard deviationOD std dev±Liu, Yangyang590 nm
129Density, optical standard deviationOD std dev±Liu, Yangyang592 nm
130Density, optical standard deviationOD std dev±Liu, Yangyang594 nm
131Density, optical standard deviationOD std dev±Liu, Yangyang596 nm
132Density, optical standard deviationOD std dev±Liu, Yangyang598 nm
133Density, optical standard deviationOD std dev±Liu, Yangyang600 nm
134Density, optical standard deviationOD std dev±Liu, Yangyang602 nm
135Density, optical standard deviationOD std dev±Liu, Yangyang604 nm
136Density, optical standard deviationOD std dev±Liu, Yangyang606 nm
137Density, optical standard deviationOD std dev±Liu, Yangyang608 nm
138Density, optical standard deviationOD std dev±Liu, Yangyang610 nm
139Density, optical standard deviationOD std dev±Liu, Yangyang612 nm
140Density, optical standard deviationOD std dev±Liu, Yangyang614 nm
141Density, optical standard deviationOD std dev±Liu, Yangyang616 nm
142Density, optical standard deviationOD std dev±Liu, Yangyang618 nm
143Density, optical standard deviationOD std dev±Liu, Yangyang620 nm
144Density, optical standard deviationOD std dev±Liu, Yangyang622 nm
145Density, optical standard deviationOD std dev±Liu, Yangyang624 nm
146Density, optical standard deviationOD std dev±Liu, Yangyang626 nm
147Density, optical standard deviationOD std dev±Liu, Yangyang628 nm
148Density, optical standard deviationOD std dev±Liu, Yangyang630 nm
149Density, optical standard deviationOD std dev±Liu, Yangyang632 nm
150Density, optical standard deviationOD std dev±Liu, Yangyang634 nm
151Density, optical standard deviationOD std dev±Liu, Yangyang636 nm
152Density, optical standard deviationOD std dev±Liu, Yangyang638 nm
153Density, optical standard deviationOD std dev±Liu, Yangyang640 nm
154Density, optical standard deviationOD std dev±Liu, Yangyang642 nm
155Density, optical standard deviationOD std dev±Liu, Yangyang644 nm
156Density, optical standard deviationOD std dev±Liu, Yangyang646 nm
157Density, optical standard deviationOD std dev±Liu, Yangyang648 nm
158Density, optical standard deviationOD std dev±Liu, Yangyang650 nm
159Density, optical standard deviationOD std dev±Liu, Yangyang652 nm
160Density, optical standard deviationOD std dev±Liu, Yangyang654 nm
161Density, optical standard deviationOD std dev±Liu, Yangyang656 nm
162Density, optical standard deviationOD std dev±Liu, Yangyang658 nm
163Density, optical standard deviationOD std dev±Liu, Yangyang660 nm
164Density, optical standard deviationOD std dev±Liu, Yangyang662 nm
165Density, optical standard deviationOD std dev±Liu, Yangyang664 nm
166Density, optical standard deviationOD std dev±Liu, Yangyang666 nm
167Density, optical standard deviationOD std dev±Liu, Yangyang668 nm
168Density, optical standard deviationOD std dev±Liu, Yangyang670 nm
169Density, optical standard deviationOD std dev±Liu, Yangyang672 nm
170Density, optical standard deviationOD std dev±Liu, Yangyang674 nm
171Density, optical standard deviationOD std dev±Liu, Yangyang676 nm
172Density, optical standard deviationOD std dev±Liu, Yangyang678 nm
173Density, optical standard deviationOD std dev±Liu, Yangyang680 nm
174Density, optical standard deviationOD std dev±Liu, Yangyang682 nm
175Density, optical standard deviationOD std dev±Liu, Yangyang684 nm
176Density, optical standard deviationOD std dev±Liu, Yangyang686 nm
177Density, optical standard deviationOD std dev±Liu, Yangyang688 nm
178Density, optical standard deviationOD std dev±Liu, Yangyang690 nm
179Density, optical standard deviationOD std dev±Liu, Yangyang692 nm
180Density, optical standard deviationOD std dev±Liu, Yangyang694 nm
181Density, optical standard deviationOD std dev±Liu, Yangyang696 nm
182Density, optical standard deviationOD std dev±Liu, Yangyang698 nm
183Density, optical standard deviationOD std dev±Liu, Yangyang700 nm
184Density, optical standard deviationOD std dev±Liu, Yangyang702 nm
185Density, optical standard deviationOD std dev±Liu, Yangyang704 nm
186Density, optical standard deviationOD std dev±Liu, Yangyang706 nm
187Density, optical standard deviationOD std dev±Liu, Yangyang708 nm
188Density, optical standard deviationOD std dev±Liu, Yangyang710 nm
189Density, optical standard deviationOD std dev±Liu, Yangyang712 nm
190Density, optical standard deviationOD std dev±Liu, Yangyang714 nm
191Density, optical standard deviationOD std dev±Liu, Yangyang716 nm
192Density, optical standard deviationOD std dev±Liu, Yangyang718 nm
193Density, optical standard deviationOD std dev±Liu, Yangyang720 nm
194Density, optical standard deviationOD std dev±Liu, Yangyang722 nm
195Density, optical standard deviationOD std dev±Liu, Yangyang724 nm
196Density, optical standard deviationOD std dev±Liu, Yangyang726 nm
197Density, optical standard deviationOD std dev±Liu, Yangyang728 nm
198Density, optical standard deviationOD std dev±Liu, Yangyang730 nm
199Density, optical standard deviationOD std dev±Liu, Yangyang732 nm
200Density, optical standard deviationOD std dev±Liu, Yangyang734 nm
201Density, optical standard deviationOD std dev±Liu, Yangyang736 nm
202Density, optical standard deviationOD std dev±Liu, Yangyang738 nm
203Density, optical standard deviationOD std dev±Liu, Yangyang740 nm
204Density, optical standard deviationOD std dev±Liu, Yangyang742 nm
205Density, optical standard deviationOD std dev±Liu, Yangyang744 nm
206Density, optical standard deviationOD std dev±Liu, Yangyang746 nm
207Density, optical standard deviationOD std dev±Liu, Yangyang748 nm
208Density, optical standard deviationOD std dev±Liu, Yangyang750 nm
209Density, optical standard deviationOD std dev±Liu, Yangyang752 nm
210Density, optical standard deviationOD std dev±Liu, Yangyang754 nm
211Density, optical standard deviationOD std dev±Liu, Yangyang756 nm
212Density, optical standard deviationOD std dev±Liu, Yangyang758 nm
213Density, optical standard deviationOD std dev±Liu, Yangyang760 nm
214Density, optical standard deviationOD std dev±Liu, Yangyang762 nm
215Density, optical standard deviationOD std dev±Liu, Yangyang764 nm
216Density, optical standard deviationOD std dev±Liu, Yangyang766 nm
217Density, optical standard deviationOD std dev±Liu, Yangyang768 nm
218Density, optical standard deviationOD std dev±Liu, Yangyang770 nm
219Density, optical standard deviationOD std dev±Liu, Yangyang772 nm
220Density, optical standard deviationOD std dev±Liu, Yangyang774 nm
221Density, optical standard deviationOD std dev±Liu, Yangyang776 nm
222Density, optical standard deviationOD std dev±Liu, Yangyang778 nm
223Density, optical standard deviationOD std dev±Liu, Yangyang780 nm
224Density, optical standard deviationOD std dev±Liu, Yangyang782 nm
225Density, optical standard deviationOD std dev±Liu, Yangyang784 nm
226Density, optical standard deviationOD std dev±Liu, Yangyang786 nm
227Density, optical standard deviationOD std dev±Liu, Yangyang788 nm
228Density, optical standard deviationOD std dev±Liu, Yangyang790 nm
229Density, optical standard deviationOD std dev±Liu, Yangyang792 nm
230Density, optical standard deviationOD std dev±Liu, Yangyang794 nm
231Density, optical standard deviationOD std dev±Liu, Yangyang796 nm
232Density, optical standard deviationOD std dev±Liu, Yangyang798 nm
233Density, optical standard deviationOD std dev±Liu, Yangyang800 nm
Size:
72290 data points

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