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Kapsenberg, Lydia; Miglioli, A; Bitter, M C; Tambutté, Eric; Dumollard, R; Gattuso, Jean-Pierre (2019): Biological data of mussel larvae treated with fluorescent dyes and grown in two pH treatments [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.899831, In: Kapsenberg, L et al. (2018): Seawater carbonate chemistry and developmental morphology data, shell length dataof mussel larvae grown in static and fluctuating pH treatments, biological data of mussel larvae treated with fluorescent dyes and grown in two pH treatments [dataset publication series]. PANGAEA, https://doi.org/10.1594/PANGAEA.899833

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Related to:
Kapsenberg, Lydia; Miglioli, A; Bitter, M C; Tambutté, Eric; Dumollard, R; Gattuso, Jean-Pierre (2018): Ocean pH fluctuations affect mussel larvae at key developmental transitions. Proceedings of the Royal Society B-Biological Sciences, 285(1893), 20182381, https://doi.org/10.1098/rspb.2018.2381
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Coverage:
Latitude: 43.682000 * Longitude: 7.319000
Date/Time Start: 2017-02-09T00:00:00 * Date/Time End: 2017-02-09T00:00:00
Event(s):
Villefranche_sur_Mer * Latitude: 43.682000 * Longitude: 7.319000 * Date/Time: 2017-02-09T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-03-25.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeKapsenberg, Lydiastudy
2SpeciesSpeciesKapsenberg, Lydia
3Registration number of speciesReg spec noKapsenberg, Lydia
4Uniform resource locator/link to referenceURL refKapsenberg, LydiaWoRMS Aphia ID
5ExperimentExpKapsenberg, Lydia
6TreatmentTreatKapsenberg, Lydia
7IdentificationIDKapsenberg, Lydiabucket
8Time in hoursTimehKapsenberg, Lydiaage of mussel larvae
9IdentificationIDKapsenberg, Lydiafamily_pair_ID
10IdentificationIDKapsenberg, Lydialarva
11AreaAreaµm2Kapsenberg, Lydiathe larval body stained by calcofluor
12AreaAreaµm2Kapsenberg, Lydiathe larval body stained by calcein
13pHpHKapsenberg, Lydiatotal scale, min
14Aragonite saturation stateOmega ArgKapsenberg, Lydiamin
15RatioRatioKapsenberg, Lydia[HCO3-]/[H+](mol/µmol, min)
16Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmKapsenberg, Lydiamin
17pHpHKapsenberg, Lydiamax
18Aragonite saturation stateOmega ArgKapsenberg, Lydiamax
19RatioRatioKapsenberg, Lydia[HCO3-]/[H+](mol/µmol, max)
20Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmKapsenberg, Lydiamax
21Temperature, waterTemp°CKapsenberg, Lydia
22Temperature, water, standard deviationTemp std dev±Kapsenberg, Lydia
23SalinitySalKapsenberg, Lydia
24Salinity, standard deviationSal std dev±Kapsenberg, Lydia
25Alkalinity, totalATµmol/kgKapsenberg, Lydia
26Alkalinity, total, standard deviationAT std dev±Kapsenberg, Lydia
27Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)max
29Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)max
30Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)max
31Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)max
32Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)min
33Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)max
34Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)min
35Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)min
36Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)min
37Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)min
38Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)min
39Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)min
40Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)max
41Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)min
42Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)max
43Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)max
Size:
4472 data points

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