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Bausch, Alexandra Renee; Gallego, M Angeles; Harianto, Januar; Thibodeau, Patricia; Bednaršek, Nina; Havenhand, Jonathan N; Klinger, Terrie (2018): Seawater carbonate chemistry and shell dissolution in dead gastropod larvae and adult Limacina helicina pteropods [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.899574, Supplement to: Bausch, AR et al. (2018): Influence of bacteria on shell dissolution in dead gastropod larvae and adult Limacina helicina pteropods under ocean acidification conditions. Marine Biology, 165(2), https://doi.org/10.1007/s00227-018-3293-3

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Abstract:
Ocean acidification (OA) increases aragonite shell dissolution in calcifying marine organisms. It has been proposed that bacteria associated with molluscan shell surfaces in situ could damage the periostracum and reduce its protective function against shell dissolution. However, the influence of bacteria on shell dissolution under OA conditions is unknown. In this study, dissolution in dead shells from gastropod larvae and adult pteropods (Limacina helicina) was examined following a 5-day incubation under a range of aragonite saturation states (Ωarag; values ranging from 0.5 to 1.8) both with and without antibiotics. Gastropod and pteropod specimens were collected from Puget Sound, Washington (48°33′19″N, 122°59′49″W and 47°41′11″N, 122°25′23″W, respectively), preserved, stored, and then treated in August 2015. Environmental scanning electron microscopy (ESEM) was used to determine the severity and extent of dissolution, which was scored as mild, severe, or summed (mild + severe) dissolution. Shell dissolution increased with decreasing Ωarag. In gastropod larvae, there was a significant interaction between the effects of antibiotics and Ωarag on severe dissolution, indicating that microbes could mediate certain types of dissolution among shells under low Ωarag. In L. helicina, there were no significant interactions between the effects of antibiotics and Ωarag on dissolution. These findings suggest that bacteria may differentially influence the response of some groups of shelled planktonic gastropods to OA conditions. This is the first assessment of the microbial–chemical coupling of dissolution in shells of either gastropod larvae or adult L. helicina under OA.
Keyword(s):
Animalia; Bottles or small containers/Aquaria (<20 L); Calcification/Dissolution; Coast and continental shelf; Laboratory experiment; Limacina helicina; Mollusca; North Pacific; Other; Pelagos; Single species; Temperate; Zooplankton
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Coverage:
Median Latitude: 48.120835 * Median Longitude: -122.710000 * South-bound Latitude: 47.686390 * West-bound Longitude: -122.996940 * North-bound Latitude: 48.555280 * East-bound Longitude: -122.423060
Date/Time Start: 2014-10-30T00:00:00 * Date/Time End: 2015-08-15T00:00:00
Event(s):
Puget_Sound_OA  * Latitude: 47.686390 * Longitude: -122.423060 * Date/Time Start: 2014-10-30T00:00:00 * Date/Time End: 2015-08-15T00:00:00 * Method/Device: Experiment (EXP)
San_Juan_Channel  * Latitude: 48.555280 * Longitude: -122.996940 * Date/Time Start: 2014-10-30T00:00:00 * Date/Time End: 2015-08-15T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-03-25.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
Event labelEventBausch, Alexandra Renee
TypeTypeBausch, Alexandra Reneestudy
SpeciesSpeciesBausch, Alexandra Renee
Registration number of speciesReg spec noBausch, Alexandra ReneeWoRMS Aphia ID
Uniform resource locator/link to referenceURL refBausch, Alexandra Renee
Experiment durationExp durationdaysBausch, Alexandra Renee
TreatmentTreatBausch, Alexandra Renee
ReplicatesRepl#Bausch, Alexandra Renee
Aragonite saturation stateOmega ArgBausch, Alexandra Renee
10 Aragonite saturation state, standard deviationOmega Arg std dev±Bausch, Alexandra Renee
11 PercentagePerc%Bausch, Alexandra ReneeMild dissolution
12 PercentagePerc%Bausch, Alexandra ReneeSevere dissolution
13 PercentagePerc%Bausch, Alexandra ReneeSummed dissolution
14 Temperature, waterTemp°CBausch, Alexandra Renee
15 Temperature, water, standard deviationTemp std dev±Bausch, Alexandra Renee
16 SalinitySalBausch, Alexandra Renee
17 Salinity, standard deviationSal std dev±Bausch, Alexandra Renee
18 pHpHBausch, Alexandra Reneetotal scale
19 pH, standard deviationpH std dev±Bausch, Alexandra Reneetotal scale
20 Alkalinity, totalATµmol/kgBausch, Alexandra Renee
21 Alkalinity, total, standard deviationAT std dev±Bausch, Alexandra Renee
22 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
23 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
24 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
25 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
26 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
27 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1754 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Event

Type
(study)

Species

Reg spec no
(WoRMS Aphia ID)

URL ref

Exp duration [days]

Treat

Repl [#]

Omega Arg
10 
Omega Arg std dev [±]
11 
Perc [%]
(Mild dissolution)
12 
Perc [%]
(Severe dissolution)
13 
Perc [%]
(Summed dissolution)
14 
Temp [°C]
15 
Temp std dev [±]
16 
Sal
17 
Sal std dev [±]
18 
pH
(total scale)
19 
pH std dev [±]
(total scale)
20 
AT [µmol/kg]
21 
AT std dev [±]
22 
CSC flag
23 
CO2 [µmol/kg]
24 
fCO2water_SST_wet [µatm]
25 
pCO2water_SST_wet [µatm]
26 
[HCO3]- [µmol/kg]
27 
[CO3]2- [µmol/kg]
28 
DIC [µmol/kg]
29 
Omega Arg
30 
Omega Cal
San_Juan_Channel laboratoryGastropod larvae5pH=7.5 + antibiotics20.5580.021.7257.6119.33714.41.030.30.27.440.032105.473.32867.551724.431730.742016.2035.992119.740.560.88
San_Juan_ChannellaboratoryGastropod larvae5pH=7.5 + antibiotics20.5580.023.0677.01610.08314.41.030.30.27.440.032105.473.32867.551724.431730.742016.2035.992119.740.560.88
San_Juan_ChannellaboratoryGastropod larvae5pH=7.6 + antibiotics20.7260.093.0404.5067.54514.31.130.30.27.550.072105.473.32851.931321.751326.591992.2445.642089.820.711.12
San_Juan_ChannellaboratoryGastropod larvae5pH=7.6 + antibiotics20.7260.095.0380.0005.03814.31.130.30.27.550.072105.473.32851.931321.751326.591992.2445.642089.820.711.12
San_Juan_ChannellaboratoryGastropod larvae5pH=7.7 + antibiotics20.9030.121.1380.0001.13814.31.130.40.27.660.052105.473.32839.651009.641013.341961.4458.042059.130.901.42
San_Juan_ChannellaboratoryGastropod larvae5pH=7.7 + antibiotics20.9030.120.6840.0000.68414.31.130.40.27.660.052105.473.32839.651009.641013.341961.4458.042059.130.901.42
San_Juan_ChannellaboratoryGastropod larvae5pH=7.8 + antibiotics31.2060.250.0000.2970.29714.41.230.30.27.790.082105.473.32828.67731.85734.521915.6176.562020.841.191.88
San_Juan_ChannellaboratoryGastropod larvae5pH=7.8 + antibiotics31.2060.250.6150.0000.61514.41.230.30.27.790.082105.473.32828.67731.85734.521915.6176.562020.841.191.88
San_Juan_ChannellaboratoryGastropod larvae5pH=7.8 + antibiotics31.2060.250.2400.0000.24014.41.230.30.27.790.082105.473.32828.67731.85734.521915.6176.562020.841.191.88
San_Juan_ChannellaboratoryGastropod larvae5pH=7.9 + antibiotics21.2540.151.0390.0001.03914.91.230.40.27.780.032105.473.32828.96751.27753.991915.8776.482021.311.191.88
San_Juan_ChannellaboratoryGastropod larvae5pH=7.9 + antibiotics21.2540.150.4140.0000.41414.91.230.40.27.780.032105.473.32828.96751.27753.991915.8776.482021.311.191.88
San_Juan_ChannellaboratoryGastropod larvae5pH=8.0 + antibiotics21.5970.160.1750.0000.17514.51.230.40.27.930.052105.473.32819.99512.31514.181850.66102.751973.411.602.52
San_Juan_ChannellaboratoryGastropod larvae5pH=8.0 + antibiotics21.5970.160.0000.0000.00014.51.230.40.27.930.052105.473.32819.99512.31514.181850.66102.751973.411.602.52
San_Juan_ChannellaboratoryGastropod larvae5pH=7.510.5610.037.9180.6988.61614.51.130.30.27.440.042105.473.32867.381725.381731.682015.8836.132119.380.560.89
San_Juan_ChannellaboratoryGastropod larvae5pH=7.620.8600.1214.0840.20814.29214.51.230.30.27.610.092105.473.32844.641143.191147.361975.6052.372072.610.821.29
San_Juan_ChannellaboratoryGastropod larvae5pH=7.620.8600.125.8180.0005.81814.51.230.30.27.610.092105.473.32844.641143.191147.361975.6052.372072.610.821.29
San_Juan_ChannellaboratoryGastropod larvae5pH=7.721.0500.255.3300.0005.33014.21.030.40.27.720.092105.473.32834.28870.18873.371942.3365.732042.341.021.61
San_Juan_ChannellaboratoryGastropod larvae5pH=7.721.0500.253.8120.0003.81214.21.030.40.27.720.092105.473.32834.28870.18873.371942.3365.732042.341.021.61
San_Juan_ChannellaboratoryGastropod larvae5pH=7.811.3150.291.4800.0001.48014.31.130.30.27.830.092105.473.32825.99661.47663.891899.8082.932008.721.292.04
San_Juan_ChannellaboratoryGastropod larvae5pH=7.911.2620.094.8290.0004.82914.31.030.40.27.820.042105.473.32826.62677.86680.341903.4881.412011.511.272.00
San_Juan_ChannellaboratoryGastropod larvae5pH=821.7860.150.0000.0000.00014.31.030.40.27.990.042105.473.32817.21438.18439.781819.94115.131952.281.792.82
San_Juan_ChannellaboratoryGastropod larvae5pH=821.7860.150.5890.0000.58914.31.030.40.27.990.042105.473.32817.21438.18439.781819.94115.131952.281.792.82
Puget_Sound_OA laboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.5 + antibiotics30.4980.0317.7816.66624.44714.61.130.30.27.380.032105.473.32877.591993.072000.352026.7431.762136.090.500.78
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.5 + antibiotics30.4980.0312.79920.19132.99014.61.130.30.27.380.032105.473.32877.591993.072000.352026.7431.762136.090.500.78
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.5 + antibiotics30.4980.0315.02514.16129.18514.61.130.30.27.380.032105.473.32877.591993.072000.352026.7431.762136.090.500.78
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.6 + antibiotics20.7170.091.5371.2062.74314.51.230.30.27.550.082105.473.32851.671323.081327.921991.4545.982089.090.721.13
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.6 + antibiotics20.7170.093.8450.0313.87614.51.230.30.27.550.082105.473.32851.671323.081327.921991.4545.982089.090.721.13
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.7 + antibiotics40.8720.270.0690.0000.06914.61.230.40.27.620.122105.473.32843.401115.331119.401971.9353.832069.160.841.32
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.7 + antibiotics40.8720.270.0320.0000.03214.61.230.40.27.620.122105.473.32843.401115.331119.401971.9353.832069.160.841.32
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.7 + antibiotics40.8720.270.1980.0000.19814.61.230.40.27.620.122105.473.32843.401115.331119.401971.9353.832069.160.841.32
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.7 + antibiotics40.8720.270.3970.0000.39714.61.230.40.27.620.122105.473.32843.401115.331119.401971.9353.832069.160.841.32
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.8 + antibiotics41.1960.240.1570.0000.15714.20.930.30.27.790.082105.473.32828.82731.30733.981916.8976.022021.741.181.87
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.8 + antibiotics41.1960.240.0780.0000.07814.20.930.30.27.790.082105.473.32828.82731.30733.981916.8976.022021.741.181.87
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.8 + antibiotics41.1960.240.0000.0000.00014.20.930.30.27.790.082105.473.32828.82731.30733.981916.8976.022021.741.181.87
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.8 + antibiotics41.1960.240.1330.0000.13314.20.930.30.27.790.082105.473.32828.82731.30733.981916.8976.022021.741.181.87
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.9 + antibiotics31.1270.090.0270.0000.02714.51.130.40.27.760.042105.473.32830.78788.66791.531926.1172.302029.201.131.77
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.9 + antibiotics31.1270.090.0270.0000.02714.51.130.40.27.760.042105.473.32830.78788.66791.531926.1172.302029.201.131.77
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.9 + antibiotics31.1270.090.0770.0000.07714.51.130.40.27.760.042105.473.32830.78788.66791.531926.1172.302029.201.131.77
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=8.0 + antibiotics41.6010.140.0200.0000.02014.61.130.40.27.930.042105.473.32819.94512.44514.311849.83103.101972.871.612.53
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=8.0 + antibiotics41.6010.140.1700.0000.17014.61.130.40.27.930.042105.473.32819.94512.44514.311849.83103.101972.871.612.53
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=8.0 + antibiotics41.6010.140.0120.0000.01214.61.130.40.27.930.042105.473.32819.94512.44514.311849.83103.101972.871.612.53
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=8.0 + antibiotics41.6010.140.1830.0000.18314.61.130.40.27.930.042105.473.32819.94512.44514.311849.83103.101972.871.612.53
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.530.5740.0514.2024.36518.56614.31.130.30.27.450.042105.473.32866.111682.591688.762014.5336.662117.300.570.90
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.530.5740.0518.3812.54420.92514.31.130.30.27.450.042105.473.32866.111682.591688.762014.5336.662117.300.570.90
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.530.5740.0520.5986.43827.03614.31.130.30.27.450.042105.473.32866.111682.591688.762014.5336.662117.300.570.90
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.620.7780.130.2190.1060.32514.21.030.30.27.590.102105.473.32847.241198.641203.031982.3949.612079.240.771.22
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.620.7780.130.6870.0000.68714.21.030.30.27.590.102105.473.32847.241198.641203.031982.3949.612079.240.771.22
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.740.9910.200.3300.0000.33014.60.930.40.27.690.082105.473.32836.53938.89942.311950.3162.552049.390.971.54
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.740.9910.200.2520.0000.25214.60.930.40.27.690.082105.473.32836.53938.89942.311950.3162.552049.390.971.54
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.740.9910.200.1530.0000.15314.60.930.40.27.690.082105.473.32836.53938.89942.311950.3162.552049.390.971.54
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.740.9910.200.1840.0000.18414.60.930.40.27.690.082105.473.32836.53938.89942.311950.3162.552049.390.971.54
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.851.1900.140.1310.0000.13114.71.130.30.27.800.092105.473.32827.73714.46717.061909.6379.012016.371.231.94
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.851.1900.140.0630.0000.06314.71.130.30.27.800.092105.473.32827.73714.46717.061909.6379.012016.371.231.94
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.851.1900.140.0600.0000.06014.71.130.30.27.800.092105.473.32827.73714.46717.061909.6379.012016.371.231.94
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.851.1900.140.0340.0000.03414.71.130.30.27.800.092105.473.32827.73714.46717.061909.6379.012016.371.231.94
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.851.1900.140.0850.0000.08514.71.130.30.27.800.092105.473.32827.73714.46717.061909.6379.012016.371.231.94
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.931.1590.100.0000.0000.00014.51.230.40.27.770.032105.473.32830.02769.18771.991922.3073.842026.161.151.81
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.931.1590.100.0000.0380.03814.51.230.40.27.770.032105.473.32830.02769.18771.991922.3073.842026.161.151.81
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=7.931.1590.100.3460.0000.34614.51.230.40.27.770.032105.473.32830.02769.18771.991922.3073.842026.161.151.81
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=831.7620.160.0110.0000.01114.51.230.40.27.970.042105.473.32818.02461.85463.531829.32111.371958.721.742.73
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=831.7620.160.0510.0000.05114.51.230.40.27.970.042105.473.32818.02461.85463.531829.32111.371958.721.742.73
Puget_Sound_OAlaboratoryLimacina helicina (zooplankton)140223marinespecies.org5pH=831.7620.160.0000.0000.00014.51.230.40.27.970.042105.473.32818.02461.85463.531829.32111.371958.721.742.73