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Su, Wenhao; Rong, Jiahuan; Zha, Shanjie; Yan, Maocang; Fang, Jun; Liu, Guangxu (2018): Seawater carbonate chemistry and cytoskeleton, lysozymes, and nitric oxide in hemocytes of blood clams, Tegillarca granosa [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.892892, Supplement to: Su, W et al. (2018): Ocean Acidification Affects the Cytoskeleton, Lysozymes, and Nitric Oxide of Hemocytes: A Possible Explanation for the Hampered Phagocytosis in Blood Clams, Tegillarca granosa. Frontiers in Physiology, 9, https://doi.org/10.3389/fphys.2018.00619

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Abstract:
An enormous amount of anthropogenic carbon dioxide (CO2) has been dissolved into the ocean, leading to a lower pH and changes in the chemical properties of seawater, which has been termed ocean acidification (OA). The impacts of pCO2-driven acidification on immunity have been revealed recently in various marine organisms. However, the mechanism causing the reduction in phagocytosis still remains unclear. Therefore, the impacts of pCO2-driven OA at present and near-future levels (pH values of 8.1, 7.8, and 7.4) on the rate of phagocytosis, the abundance of cytoskeleton components, the levels of nitric oxide (NO), and the concentration and activity of lysozymes (LZM) of hemocytes were investigated in a commercial bivalve species, the blood clam (Tegillarca granosa). In addition, the effects of OA on the expression of genes regulating actin skeleton and nitric oxide synthesis 2 (NOS2) were also analyzed. The results obtained showed that the phagocytic rate, cytoskeleton component abundance, concentration and activity of LZM of hemocytes were all significantly reduced after a 2-week exposure to the future OA scenario of a pH of 7.4. On the contrary, a remarkable increase in the concentration of NO compared to that of the control was detected in clams exposed to OA. Furthermore, the expression of genes regulating the actin cytoskeleton and NOS were significantly up-regulated after OA exposure. Though the mechanism causing phagocytosis seemed to be complicated based on the results obtained in the present study and those reported previously, our results suggested that OA may reduce the phagocytosis of hemocytes by (1) decreasing the abundance of cytoskeleton components and therefore hampering the cytoskeleton-mediated process of engulfment, (2) reducing the concentration and activity of LZM and therefore constraining the degradation of the engulfed pathogen through an oxygen-independent pathway, and (3) inducing the production of NO, which may negatively regulate immune responses.
Keyword(s):
Animalia; Benthic animals; Benthos; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Gene expression (incl. proteomics); Laboratory experiment; Mollusca; North Pacific; Other studied parameter or process; Single species; Tegillarca granosa; Temperate
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Coverage:
Latitude: 28.466670 * Longitude: 121.183330
Date/Time Start: 2017-07-01T00:00:00 * Date/Time End: 2017-07-30T00:00:00
Event(s):
Qingjiang * Latitude: 28.466670 * Longitude: 121.183330 * Date/Time Start: 2017-07-01T00:00:00 * Date/Time End: 2017-07-30T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2018-08-06.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeLiu, Guangxustudy
2SpeciesSpeciesLiu, Guangxu
3Registration number of speciesReg spec noLiu, Guangxu
4Uniform resource locator/link to referenceURL refLiu, GuangxuWoRMS Aphia ID
5Experiment durationExp durationdaysLiu, Guangxu
6pHpHLiu, GuangxuNBS scale, treatment
7ReplicateReplLiu, Guangxu
8Phagocytosis ratePhagocytosis rate%Liu, Guangxu
9FluorescenceFluorescenceLiu, Guangxufluorescent intensity of microfilament
10Nitric oxide in hemocytes, per cellNO hemocytes/cellfg/#Liu, Guangxu
11Lysozyme in hemocytes, per cellLZM hemocytes/cellfg/#Liu, Guangxu
12Lysozyme enzyme activity, per cellLZM EA/cellIU/#Liu, Guangxu
13Gene nameGeneLiu, Guangxu
14Gene expression, fold change, relativeGene expressionLiu, Guangxu
15Gene expression, fold change, relative, standard deviationGene expression std dev±Liu, Guangxu
16Temperature, waterTemp°CLiu, Guangxu
17Temperature, water, standard errorT std e±Liu, Guangxu
18SalinitySalLiu, Guangxu
19Salinity, standard errorSal std e±Liu, Guangxu
20pHpHLiu, GuangxuNBS scale
21pH, standard errorpH std e±Liu, GuangxuPotentiometricNBS scale
22Alkalinity, totalATµmol/kgLiu, GuangxuPotentiometric titration
23Alkalinity, total, standard errorAT std e±Liu, GuangxuPotentiometric titration
24Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmLiu, GuangxuCalculated using CO2SYS
25Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard errorpCO2water_SST_wet std e±Liu, GuangxuCalculated using CO2SYS
26Carbon, inorganic, dissolvedDICµmol/kgLiu, GuangxuCalculated using CO2SYS
27Carbon, inorganic, dissolved, standard errorDIC std e±Liu, GuangxuCalculated using CO2SYS
28Aragonite saturation stateOmega ArgLiu, GuangxuCalculated using CO2SYS
29Aragonite saturation state, standard errorOmega Arg std e±Liu, GuangxuCalculated using CO2SYS
30Calcite saturation stateOmega CalLiu, GuangxuCalculated using CO2SYS
31Calcite saturation state, standard errorOmega Cal std e±Liu, GuangxuCalculated using CO2SYS
32Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
34Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
38Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
2781 data points

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