Citation:

gcb.14372

Name: Seawater carbonate chemistry and the net calcification and photosynthesis rate of coralline algae
Published: 2018-07-20
License: https://creativecommons.org/licenses/by/3.0/
Keywords: Benthos; Bossiella orbigniana; Bossiella plumosa; Bottles or small containers/Aquaria (<20 L); Calcification/Dissolution; Calliarthron tuberculosum; Coast and continental shelf; Corallina officinalis; Corallina vancouveriensis Yendo; Growth/Morphology; Laboratory experiment; Macroalgae; North Pacific; North Pacific; Plantae; Primary production/Photosynthesis; Rhodophyta; Single species; Temperate

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Keyword(s):

Benthos; Bossiella orbigniana; Bossiella plumosa; Bottles or small containers/Aquaria (<20 L); Calcification/Dissolution; Calliarthron tuberculosum; Coast and continental shelf; Corallina officinalis; Corallina vancouveriensis Yendo; Growth/Morphology; Laboratory experiment; Macroalgae; North Pacific; North Pacific; Plantae; Primary production/Photosynthesis; Rhodophyta; Single species; Temperate

Further details:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2018-07-20.

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Type	Type		Barner, A K		study
2	Species	Species		Barner, A K
3	Registration number of species	Reg spec no		Barner, A K
4	Uniform resource locator/link to reference	URL ref		Barner, A K		WoRMS Aphia ID
5	Experiment	Exp		Barner, A K
6	Identification	ID		Barner, A K		Trial
7	Identification	ID		Barner, A K		Chamber_number
8	Sample ID	Sample ID		Barner, A K
9	Temperature, water	Temp	°C	Barner, A K
10	Irradiance	E	µmol/m²/s	Barner, A K
11	Dry mass	Dry m	g	Barner, A K
12	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Barner, A K
13	Alkalinity, total	AT	µmol/kg	Barner, A K		Change in alkalinity
14	Carbon, inorganic, dissolved	DIC	µmol/kg	Barner, A K		Change in DIC
15	Time in minutes	Time	min	Barner, A K		Trial_length
16	Volume	Vol	l	Barner, A K		Chamber
17	Aragonite saturation state	Omega Arg		Barner, A K
18	Wet mass	Wet m	g	Barner, A K		calculated
19	Surface area	SA	cm²	Barner, A K		calculated
20	Calcification rate of calcium carbonate	Calc rate CaCO3	µmol/g/h	Barner, A K
21	Photosynthesis rate	PN	µmol/kg/h	Barner, A K
22	Calcium carbonate, mass	CaCO3	g	Barner, A K		calculated
23	Non-calcified mass	Non calc mass	g	Barner, A K		calculated
24	Genus	Genus		Barner, A K
25	Description	Description		Barner, A K		SAV_Ratio
26	Habitat	Habitat		Barner, A K
27	Description	Description		Barner, A K		Percent_calcium_carbonate
28	Salinity	Sal		Barner, A K
29	Temperature, water	Temp	°C	Barner, A K
30	Temperature, water	Temp	°C	Barner, A K		adjust
31	Alkalinity, total	AT	µmol/kg	Barner, A K
32	pH	pH		Barner, A K		total scale
33	pH	pH		Barner, A K		total scale
34	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Barner, A K
35	Aragonite saturation state	Omega Arg		Barner, A K
36	Carbon, inorganic, dissolved	DIC	µmol/kg	Barner, A K
37	Identification	ID		Barner, A K		Starting_ID
38	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
39	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
40	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
41	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
42	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
43	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
44	Carbon, inorganic, dissolved	DIC	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
45	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
46	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 3.0 Unported (CC-BY-3.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

10904 data points

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