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Wall, Christopher B; Mason, R A B; Ellis, W R; Cunning, Ross; Gates, Ruth D (2017): Seawater carbonate chemistry and tissue biomass composition, calcification of a reef coral [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.892313, Supplement to: Wall, CB et al. (2017): Elevated pCO2 affects tissue biomass composition, but not calcification, in a reef coral under two light regimes. Royal Society Open Science, 4(11), 170683, https://doi.org/10.1098/rsos.170683

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Abstract:
Ocean acidification (OA) is predicted to reduce reef coral calcification rates and threaten the long-term growth of coral reefs under climate change. Reduced coral growth at elevated pCO2 may be buffered by sufficiently high irradiances; however, the interactive effects of OA and irradiance on other fundamental aspects of coral physiology, such as the composition and energetics of coral biomass, remain largely unexplored. This study tested the effects of two light treatments (7.5 versus 15.7 mol photons/m**2/d) at ambient or elevated pCO2 (435 versus 957 µatm) on calcification, photopigment and symbiont densities, biomass reserves (lipids, carbohydrates, proteins), and biomass energy content (kJ) of the reef coral Pocillopora acuta from Kāne'ohe Bay, Hawai'i. While pCO2 and light had no effect on either area- or biomass-normalized calcification, tissue lipids/gdw and kJ/gdw were reduced 15% and 14% at high pCO2, and carbohydrate content increased 15% under high light. The combination of high light and high pCO2 reduced protein biomass (per unit area) by approximately 20%. Thus, under ecologically relevant irradiances, P. acuta in Kāne'ohe Bay does not exhibit OA-driven reductions in calcification reported for other corals; however, reductions in tissue lipids, energy content and protein biomass suggest OA induced an energetic deficit and compensatory catabolism of tissue biomass. The null effects of OA on calcification at two irradiances support a growing body of work concluding some reef corals may be able to employ compensatory physiological mechanisms that maintain present-day levels of calcification under OA. However, negative effects of OA on P. acuta biomass composition and energy content may impact the long-term performance and scope for growth of this species in a high pCO2 world.
Keyword(s):
Animalia; Benthic animals; Benthos; Biomass/Abundance/Elemental composition; Calcification/Dissolution; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Growth/Morphology; Laboratory experiment; Light; North Pacific; North Pacific; Pocillopora acuta; Single species; Tropical
Source:
Wall, Christopher B; Mason, Robert W; Ellis, W R; Cunning, Ross; Gates, Ruth D (accepted): Data from: Elevated pCO2 affects tissue biomass composition, but not calcification, in a reef coral under two light regimes. Dryad Digital Repository, https://doi.org/10.5061/dryad.5vg70
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Coverage:
Latitude: 21.435810 * Longitude: -157.786670
Date/Time Start: 2014-10-13T00:00:00 * Date/Time End: 2014-10-29T00:00:00
Event(s):
Oahu_Island * Latitude: 21.435810 * Longitude: -157.786670 * Date/Time Start: 2014-10-13T00:00:00 * Date/Time End: 2014-10-29T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2018-07-02.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TypeTypeWall, Christopher Bstudy
SpeciesSpeciesWall, Christopher B
Registration number of speciesReg spec noWall, Christopher B
Uniform resource locator/link to referenceURL refWall, Christopher BWoRMS Aphia ID
Experiment durationExp durationdaysWall, Christopher B
TreatmentTreatWall, Christopher B
IdentificationIDWall, Christopher BTank
Colony number/IDColony no/IDWall, Christopher B
IdentificationIDWall, Christopher B
10 VolumeVolmlWall, Christopher Btotal tissue slurry of the coral + symbiont tissues
11 Surface areaSAcm2Wall, Christopher B
12 Mass changeMass chngWall, Christopher Bthis is the total change in skeletal dry weight (i.e., net calcification) incurred between initial and final mass measurements (23 d)
13 Ash free dry massafdmgWall, Christopher Bper ml of total blastate
14 Cell densityCells#/mlWall, Christopher Bper ml of total blastate
15 Chlorophyll aChl aµg/lWall, Christopher Bper ml of total blastate
16 Chlorophyll c2Chl c2µg/lWall, Christopher Bper ml of total blastate
17 ProteinsProteinmg/mlWall, Christopher Bper ml of total blastate
18 CarbohydratesCHOµg/mlWall, Christopher Bper ml of total blastate
19 LipidsLipidsµg/lWall, Christopher Bper ml of total blastate
20 Lipid contentLipid contg/gWall, Christopher Bper grams of tissue
21 IrradianceEE/m2/dayWall, Christopher B
22 pHpHWall, Christopher BPotentiometrictotal scale
23 pH, standard errorpH std e±Wall, Christopher BPotentiometrictotal scale
24 Alkalinity, totalATµmol/kgWall, Christopher BPotentiometric titration
25 Alkalinity, total, standard errorAT std e±Wall, Christopher BPotentiometric titration
26 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmWall, Christopher BCalculated using seacarb
27 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard errorpCO2water_SST_wet std e±Wall, Christopher BCalculated using seacarb
28 Bicarbonate ion[HCO3]-µmol/kgWall, Christopher BCalculated using seacarb
29 Bicarbonate ion, standard error[HCO3]- std e±Wall, Christopher BCalculated using seacarb
30 Carbonate ion[CO3]2-µmol/kgWall, Christopher BCalculated using seacarb
31 Carbonate ion, standard error[CO3]2- std e±Wall, Christopher BCalculated using seacarb
32 Aragonite saturation stateOmega ArgWall, Christopher BCalculated using seacarb
33 Aragonite saturation state, standard errorOmega Arg std e±Wall, Christopher BCalculated using seacarb
34 SalinitySalWall, Christopher B
35 Temperature, waterTemp°CWall, Christopher B
36 Temperature, water, standard errorT std e±Wall, Christopher B
37 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
38 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
43 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
44 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
6677 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Type
(study)

Species

Reg spec no

URL ref
(WoRMS Aphia ID)

Exp duration [days]

Treat

ID
(Tank)

Colony no/ID

ID
10 
Vol [ml]
(total tissue slurry of the co...)
11 
SA [cm2]
12 
Mass chn [g]
(this is the total change in s...)
13 
afdm [g]
(per ml of total blastate)
14 
Cells [#/ml]
(per ml of total blastate)
15 
Chl a [µg/l]
(per ml of total blastate)
16 
Chl c2 [µg/l]
(per ml of total blastate)
17 
Protein [mg/ml]
(per ml of total blastate)
18 
CHO [µg/ml]
(per ml of total blastate)
19 
Lipids [µg/l]
(per ml of total blastate)
20 
Lipid cont [g/g]
(per grams of tissue)
21 
E [E/m2/day]
22 
pH
(total scale, Potentiometric)
23 
pH std e [±]
(total scale, Potentiometric)
24 
AT [µmol/kg]
(Potentiometric titration)
25 
AT std e [±]
(Potentiometric titration)
26 
pCO2water_SST_wet [µatm]
(Calculated using seacarb)
27 
pCO2water_SST_wet std e [±]
(Calculated using seacarb)
28 
[HCO3]- [µmol/kg]
(Calculated using seacarb)
29 
[HCO3]- std e [±]
(Calculated using seacarb)
30 
[CO3]2- [µmol/kg]
(Calculated using seacarb)
31 
[CO3]2- std e [±]
(Calculated using seacarb)
32 
Omega Arg
(Calculated using seacarb)
33 
Omega Arg std e [±]
(Calculated using seacarb)
34 
Sal
35 
Temp [°C]
36 
T std e [±]
37 
CSC flag
(Calculated using seacarb afte...)
38 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
39 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
40 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
41 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
42 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
43 
DIC [µmol/kg]
(Calculated using seacarb afte...)
44 
Omega Arg
(Calculated using seacarb afte...)
45 
Omega Cal
(Calculated using seacarb afte...)
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO21G8210.06.20160.05500.00858433330.00306910.00057800.3640152.87.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO21H6225.011.66530.11050.00866625000.00222990.00056890.3830104.97.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO21K1617.012.97810.07870.00880.00302300.00072930.5190144.57.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO21L4615.58.22390.02760.00840.00303800.00061480.465090.92033.30.47297.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO21M7228.016.06470.10180.00884566670.00310540.00046820.5440131.01729.20.33937.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO21N1325.013.43930.11850.00866675000.00220960.00062690.3650115.41400.00.49307.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO21P5814.05.91770.02030.00840.00127450.00035250.2990107.7666.70.18877.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO22G4714.07.97550.05190.00877800000.00255110.00053950.4780131.67.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO22H1922.07.83360.03590.00863308330.00140740.00049950.189065.77.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO22K6528.56.23710.07360.00930.00107500.00033390.378098.37.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO22L8017.56.52090.06720.00820.00205650.00058370.462088.41933.30.43947.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO22M1115.54.25020.00792125000.00136600.00032980.257053.91333.30.32007.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO22N7132.513.12000.04060.00833316670.00179220.00058430.311077.31600.00.30977.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO22P8126.512.97810.11110.00940.00208850.00052510.2630107.3800.00.18057.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO23G117.03.54070.00744041670.00097170.00028520.152060.37.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO23H5916.510.38810.07780.00984900000.00210790.00071250.5230140.27.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO23K119.09.60760.04680.00880.00132260.00040000.290079.77.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO23L5012.07.08860.05140.00920.00238330.00059860.4990119.31066.70.28327.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO23M6812.58.15290.04610.01034441670.00317680.00089470.5000101.92700.00.51927.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO23N8212.54.42760.05510.00893150000.00082380.00030300.242062.7300.00.10847.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-ambient pCO23P8214.511.34600.06470.00950.00256780.00059160.4700115.61800.00.36737.57.990.0121773451111733817932.840.0634.325.730.03812.29439.22440.621721.68183.901917.872.944.46
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO24G2610.03.82450.03250.00784866670.00125620.00041570.335070.17.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO24H5616.57.69170.05310.00825616670.00242710.00069720.407092.57.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO24K2618.05.38560.07630.00890.00188120.00060980.332088.77.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO24L1523.511.84270.08580.00960.00333940.00083230.5610131.61333.30.34487.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO24M1224.511.73630.04320.00886333330.00316940.00087280.4710130.71533.30.29117.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO24N937.517.16460.11620.00805658330.00267740.00085700.2460106.51070.00.26597.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO24P5618.58.40130.09840.00910.00242170.00077960.2970101.51533.30.30467.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO25G215.55.42100.06240.01313441670.00099400.00043150.3510151.67.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO25H7324.05.88230.03560.01203858330.00116310.00034870.223074.57.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO25K6111.52.76010.08070.01060.00095860.00028710.172055.57.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO25L8615.04.35670.06250.01310.00147250.00052000.3340147.72333.30.45167.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO25M629.011.80730.16760.00844691670.00227340.00047980.3500105.12033.30.39107.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO25N229.015.56800.12090.01176308330.00343260.00082420.4170136.11566.70.33817.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO25P6025.012.72970.20930.01290.00270800.00052470.3370104.0766.70.18557.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO26G9018.011.55890.08530.012412200000.00312550.00071470.6610195.97.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO26H8336.513.47480.15050.01144875000.00156480.00055970.408099.21733.30.32707.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO26K3315.09.67850.08740.01030.00163630.00051010.3590151.87.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO26L7.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO26M8317.510.38810.06470.01036525000.00219520.00057190.4810149.71000.00.24797.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO26N7821.511.84270.01104641670.00180950.00062180.4000106.71240.00.32407.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32low light-high pCO26P7415.07.12400.01170.00150760.00043540.4550161.21116.70.29597.57.710.02218449573919171210851.720.0734.325.730.03826.09932.61935.571918.52107.552052.171.722.61
laboratoryPocillopora acuta (coral)759099marinespecies.org32high light-ambient pCO27G7412.09.28820.04690.00946233330.00185710.00042300.3750147.315.78.010.0121793420111714918742.970.0634.325.730.03811.63415.74417.061706.42190.871908.923.054.63
laboratoryPocillopora acuta (coral)759099marinespecies.org32high light-ambient pCO27H3528.011.09770.08400.00885808330.00167040.00052030.3820115.215.78.010.0121793420111714918742.970.0634.325.730.03811.63415.74417.061706.42190.871908.923.054.63
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laboratoryPocillopora acuta (coral)759099marinespecies.org32high light-ambient pCO28P3112.54.60500.09170.01150.00139070.00081930.338090.2366.70.139215.78.010.0121793420111714918742.970.0634.325.730.03811.63415.74417.061706.42190.871908.923.054.63
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