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Vopel, Kay; Del-Río, Vopel; Pilditch, Conrad A (2018): Seawater carbonate chemistry and benthic primary production and inorganic nitrogen fluxes in two coastal sediments [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.887792, Supplement to: Vopel, K et al. (2018): Effects of CO2 enrichment on benthic primary production and inorganic nitrogen fluxes in two coastal sediments. Scientific Reports, 8(1), https://doi.org/10.1038/s41598-017-19051-w

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Abstract:
Ocean acidification may alter the cycling of nitrogen in coastal sediment and so the sediment-seawater nitrogen flux, an important driver of pelagic productivity. To investigate how this perturbation affects the fluxes of NOX- (nitrite/nitrate), NH4+ and O2, we incubated estuarine sand and subtidal silt in recirculating seawater with a CO2-adjusted pH of 8.1 and 7.9. During a 41-day incubation, the seawater kept at pH 8.1 lost 97% of its NOX- content but the seawater kept at pH 7.9 lost only 18%. Excess CO2 increased benthic photosynthesis. In the silt, this was accompanied by a reversal of the initial NOX- efflux into influx. The estuarine sand sustained its initial NOX- influx but, by the end of the incubation, released more NH4+ at pH 7.9 than at pH 8.1. We hypothesise that these effects share a common cause; excess CO2 increased the growth of benthic microalgae and so nutrient competition with ammonia oxidising bacteria (AOB). In the silt, diatoms likely outcompeted AOB for NH4+ and photosynthesis increased the dark/light fluctuations in the pore water oxygenation inhibiting nitrification and coupled nitrification/denitrification. If this is correct, then excess CO2 may lead to retention of inorganic nitrogen adding to the pressures of increasing coastal eutrophication.
Keyword(s):
Benthos; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Entire community; Laboratory experiment; Other studied parameter or process; Soft-bottom community; South Pacific; Temperate
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Coverage:
Median Latitude: -37.142640 * Median Longitude: 175.559030 * South-bound Latitude: -37.491390 * West-bound Longitude: 175.170560 * North-bound Latitude: -36.793890 * East-bound Longitude: 175.947500
Date/Time Start: 2015-05-10T00:00:00 * Date/Time End: 2015-05-12T00:00:00
Event(s):
Hauraki_Gulf * Latitude: -36.793890 * Longitude: 175.170560 * Date/Time: 2015-05-10T00:00:00 * Method/Device: Experiment (EXP)
Tauranga_Harbour * Latitude: -37.491390 * Longitude: 175.947500 * Date/Time: 2015-05-12T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2018-03-28.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEventVopel, Kay
2TypeTypeVopel, Kaystudy
3IdentificationIDVopel, Kayevent
4Oxygen uptake, totalTOUµmol/m2/hVopel, Kay
5DifferenceDiffVopel, Kaylight/dark differences in TOU
6Ammonium, flux[NH4]+ fluxµmol/m2/hVopel, Kay
7Nitrite and nitrate, fluxNO2+NO3 fluxµmol/m2/hVopel, Kay
8TreatmentTreatVopel, Kay
9Time point, descriptiveTime pointVopel, Kay
10Sediment typeSedimentVopel, Kay
11IdentificationIDVopel, Kaycore
12Light modeL modeVopel, Kay
13SalinitySalVopel, Kay
14Salinity, standard deviationSal std dev±Vopel, Kay
15Temperature, waterTemp°CVopel, Kay
16Temperature, water, standard deviationTemp std dev±Vopel, Kay
17Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmVopel, KayCalculated using CO2calc
18Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Vopel, KayCalculated using CO2calc
19pHpHVopel, KayPotentiometrictotal scale
20pH, standard deviationpH std dev±Vopel, KayPotentiometrictotal scale
21Carbon, inorganic, dissolvedDICµmol/kgVopel, Kay
22Carbon, inorganic, dissolved, standard deviationDIC std dev±Vopel, Kay
23Alkalinity, totalATµmol/kgVopel, KayCalculated using CO2calc
24Alkalinity, total, standard deviationAT std dev±Vopel, KayCalculated using CO2calc
25Ammonium[NH4]+µg/m3Vopel, Kay
26Ammonium, standard deviation[NH4]+ std dev±Vopel, Kay
27Nitrate and Nitrite[NO3]- + [NO2]-mg/m3Vopel, Kay
28Nitrate and Nitrite, standard deviation[NO3]- + [NO2]- std dev±Vopel, Kay
29Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
2627 data points

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