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Sugie, Koji; Takeshi, Yoshimura; Masahide, Wakita (2018): Seawater carbonate chemistry and elemental composition of the particulate and dissolved organic matter of marine diatoms [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.887739, Supplement to: Sugie, Koji; Yoshimura, T; Wakita, M (2018): Impact of CO2 on the elemental composition of the particulate and dissolved organic matter of marine diatoms emerged after nitrate depletion. Limnology and Oceanography, https://doi.org/10.1002/lno.10816

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Abstract:
Although the dissolved inorganic carbon concentration, pH, and nutrient regimes of seawater dramatically change in coastal regions, the synergistic effects of changes in the CO2 and nutrient levels on the elemental dynamics of the particulate and dissolved organic matters (DOMs) produced by diatoms are rarely investigated. Here, we investigated the impacts of four different CO2 levels (180, 380, 600, and 1000 μatm partial pressure of CO2 : pCO2) on the allocation of carbon, nitrogen, phosphorus, and silicon between the particulate matter (PM) and DOM in two cosmopolitan coastal diatoms, Chaetoceros affinis and Ditylum brightwellii, under nutrient‐replete and nitrate‐depleted conditions. Under nutrient‐replete conditions, the specific growth rates of both species were positively correlated with pCO2 levels. The elemental compositions of the exponentially growing diatoms were stable under the different pCO2 conditions. After nitrate depletion, the particulate organic carbon to particulate nitrogen ratio and biogenic silica content per unit biomass in both species were positively correlated with the pCO2 value. Factors affecting the pCO2 dependent change in elemental composition were the variations in the partitioning of organic carbon between PM and DOM in C. affinis, and the physiological uncoupling of intracellular carbon and nitrogen and the intracellular silicon and nitrogen, as well as resting spore formation in D. brightwellii. Under high‐CO2 conditions, the faster growth rates of both diatom species could lead to their dominance in a phytoplankton community; their blooms could modify the first‐order processes in the biogeochemical cycling of bioelements after nitrate depletion.
Keyword(s):
Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chromista; Coast and continental shelf; Growth/Morphology; Laboratory experiment; Macro-nutrients; North Pacific; North Pacific; Ochrophyta; Pelagos; Phytoplankton; Single species; Temperate
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2018-03-28.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeSugie, Kojistudy
2SpeciesSpeciesSugie, Koji
3Registration number of speciesReg spec noSugie, Koji
4Uniform resource locator/link to referenceURL refSugie, KojiWoRMS Aphia ID
5Experiment durationExp durationdaysSugie, Koji
6Time in daysTimedaysSugie, KojiCulture age
7Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmSugie, Koji
8IdentificationIDSugie, KojiCulture bottle
9Temperature, waterTemp°CSugie, Koji
10SalinitySalSugie, Koji
11Alkalinity, totalATµmol/kgSugie, Koji
12Carbon, inorganic, dissolvedDICµmol/kgSugie, Koji
13Growth rateµ1/daySugie, Koji
14Chlorophyll aChl aµg/lSugie, Koji
15Cell densityCells#/mlSugie, Koji
16Phytoplankton, biovolumePhytopl biovolµm3/mlSugie, Koji
17Carbon, organic, particulatePOCµmol/lSugie, Koji
18Nitrogen, particulatePNµmol/lSugie, Koji
19Phosphorus, particulatePPµmol/lSugie, Koji
20Biogenic silicabSiO2µmol/lSugie, Koji
21Carbon, organic, dissolvedDOCµmol/lSugie, Koji
22Nitrogen, organic, dissolvedDONµmol/lSugie, Koji
23Phosphorus, organic, dissolvedDOPµmol/lSugie, Koji
24Transparent exopolymer particles as Gum Xanthan equivalents per volumeTEPµg Xeq/lSugie, Koji
25BacteriaBact#/mlSugie, Koji
26Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
27pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
28Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1495 data points

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