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Stenegren, Marcus; Caputo, Andrea; Berg, Carlo; Bonnet, Sophie; Foster, Rachel A (2018): Abundance of symbiotic and free-living diazotrophic cyanobacteria in the western tropical South Pacific during L'Atalante cruise OUTPACE in 2015 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.887730

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Abstract:
Eight different cyanobacterial diazotrophs (Trichodesmium spp., UCYN-A1, UCYN-A2, UCYN-B, UCYN-C, het-1, het-2 and het-3), and two phytoplankton hosts (UCYN-A1 and A2 hosts), were quantified by their nifH genes (18S rRNA for the hosts) in the western tropical South Pacific in spring 2015. The qPCR data was generated at 18 stations along a west to east transect from New Caledonia to Tahiti, covering oligotrophic to ultra-oligotrophic waters.
Related to:
Stenegren, Marcus; Caputo, Andrea; Berg, Carlo; Bonnet, Sophie; Foster, Rachel A (2018): Distribution and drivers of symbiotic and free-living diazotrophic cyanobacteria in the western tropical South Pacific. Biogeosciences, 15(5), 1559-1578, https://doi.org/10.5194/bg-15-1559-2018
Further details:
Supplementary data to: Stenegren, M et al. (2018): Distribution and drivers of symbiotic and free-living diazotrophic cyanobacteria in the western tropical South Pacific
Coverage:
Median Latitude: -19.581889 * Median Longitude: 178.629000 * South-bound Latitude: -22.001000 * West-bound Longitude: 159.902000 * North-bound Latitude: -17.996000 * East-bound Longitude: -160.000000
Date/Time Start: 2015-02-22T00:00:00 * Date/Time End: 2015-03-30T00:00:00
Minimum DEPTH, water: 0 m * Maximum DEPTH, water: 180 m
Event(s):
OUTPACE-LDA  * Latitude: -19.212000 * Longitude: 164.688000 * Date/Time: 2015-02-26T00:00:00 * Location: South Pacific * Campaign: OUTPACE * Basis: L Atalante * Method/Device: CTD, Seabird (CTD-R)
OUTPACE-LDB  * Latitude: -18.241000 * Longitude: -170.857000 * Date/Time: 2015-03-15T00:00:00 * Location: South Pacific * Campaign: OUTPACE * Basis: L Atalante * Method/Device: CTD, Seabird (CTD-R)
OUTPACE-LDC  * Latitude: -18.427000 * Longitude: -165.923000 * Date/Time: 2015-03-23T00:00:00 * Location: South Pacific * Campaign: OUTPACE * Basis: L Atalante * Method/Device: CTD, Seabird (CTD-R)
Comment:
0 = below detection
1 = detected but not quantifiable
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1 Event labelEventStenegren, Marcus
2 NumberNoStenegren, Marcusof CTD
3 Area/localityAreaStenegren, Marcus
4 DEPTH, waterDepth watermStenegren, MarcusGeocode
5 Trichodesmium, abundance expressed in number of nifH gene copiesTrichodesmium abund nifH copies#/lStenegren, Marcus
6 Unicellular cyanobacteria-A, abundance expressed in number of nifH gene copiesUCYN-A abund nifH copies#/lStenegren, MarcusUnicellular cyanobacteria-A1
7 Unicellular cyanobacteria-A, abundance expressed in number of nifH gene copiesUCYN-A abund nifH copies#/lStenegren, MarcusUnicellular cyanobacteria-A2
8 Unicellular cyanobacteria-B, abundance expressed in number of nifH gene copiesUCYN-B abund nifH copies#/lStenegren, Marcus
9 Unicellular cyanobacteria-C, abundance expressed in number of nifH gene copiesUCYN-C abund nifH copies#/lStenegren, Marcus
10 Unicellular cyanobacteria-A, abundance expressed in number of host gene copies, 18S rRNAUCYN-A abund host copies#/lStenegren, MarcusUnicellular cyanobacteria Host-A1
11 Unicellular cyanobacteria-A, abundance expressed in number of host gene copies, 18S rRNAUCYN-A abund host copies#/lStenegren, MarcusUnicellular cyanobacteria Host-A2
12 Heterocystous cyanobacteria, abundance expressed in number of nifH gene copiesHet nifH#/lStenegren, MarcusHet-1
13 Heterocystous cyanobacteria, abundance expressed in number of nifH gene copiesHet nifH#/lStenegren, MarcusHet-2
14 Heterocystous cyanobacteria, abundance expressed in number of nifH gene copiesHet nifH#/lStenegren, MarcusHet-3
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Size:
1362 data points

Data

Download dataset as tab-delimited text — use the following character encoding:

1 
Event		2 
No
(of CTD)		3 
Area		4 
Depth water [m]		5 
Trichodesmium abund nifH copies [#/l]		6 
UCYN-A abund nifH copies [#/l]
(Unicellular cyanobacteria-A1)		7 
UCYN-A abund nifH copies [#/l]
(Unicellular cyanobacteria-A2)		8 
UCYN-B abund nifH copies [#/l]		9 
UCYN-C abund nifH copies [#/l]		10 
UCYN-A abund host copies [#/l]
(Unicellular cyanobacteria Hos...)		11 
UCYN-A abund host copies [#/l]
(Unicellular cyanobacteria Hos...)		12 
Het nifH [#/l]
(Het-1)		13 
Het nifH [#/l]
(Het-2)		14 
Het nifH [#/l]
(Het-3)
OUTPACE-SD1 5Melanesian Archipelago0
OUTPACE-SD15Melanesian Archipelago54748503004093331005989318515879
OUTPACE-SD15Melanesian Archipelago9164439610165465000405011654257
OUTPACE-SD15Melanesian Archipelago16210523011444917000576228333366
OUTPACE-SD15Melanesian Archipelago356643097961328890031006629725023324
OUTPACE-SD15Melanesian Archipelago7015332483924632150115210001
OUTPACE-SD15Melanesian Archipelago1050053400000
OUTPACE-SD2 9Melanesian Archipelago0
OUTPACE-SD29Melanesian Archipelago532117000225392499002694704181
OUTPACE-SD29Melanesian Archipelago97627490013982710022191334159
OUTPACE-SD29Melanesian Archipelago1500685355600109844135183
OUTPACE-SD29Melanesian Archipelago36186116143676227001738471268126
OUTPACE-SD29Melanesian Archipelago701375938491124162101671101
OUTPACE-SD29Melanesian Archipelago105188210161400000
OUTPACE-SD3 18Melanesian Archipelago0
OUTPACE-SD318Melanesian Archipelago594135380037574000132992951936
OUTPACE-SD318Melanesian Archipelago9885034500272430001306640750
OUTPACE-SD318Melanesian Archipelago169969001351000000
OUTPACE-SD318Melanesian Archipelago351014790000030471443
OUTPACE-SD318Melanesian Archipelago701146724206440000534
OUTPACE-SD318Melanesian Archipelago10511657005510010631
OUTPACE-LDA 24Melanesian Archipelago0
OUTPACE-LDA24Melanesian Archipelago46566300100310900
OUTPACE-LDA24Melanesian Archipelago911303190010002790
OUTPACE-LDA24Melanesian Archipelago1677661900100000
OUTPACE-LDA24Melanesian Archipelago356451910011000000
OUTPACE-LDA24Melanesian Archipelago7055635002400000369
OUTPACE-LDA24Melanesian Archipelago10555830010000287
OUTPACE-SD4 69Melanesian Archipelago0
OUTPACE-SD469Melanesian Archipelago51002751103740002714753375
OUTPACE-SD469Melanesian Archipelago1022821410513338003927013891154
OUTPACE-SD469Melanesian Archipelago15437391141137390006090936561875
OUTPACE-SD469Melanesian Archipelago35229535881534133308257015634301198
OUTPACE-SD469Melanesian Archipelago70423626211690036311
OUTPACE-SD469Melanesian Archipelago10593700100100
OUTPACE-SD5 73Melanesian Archipelago05187681122819007373527541
OUTPACE-SD573Melanesian Archipelago542020310746500337824165
OUTPACE-SD573Melanesian Archipelago1089509800189930040161659187
OUTPACE-SD573Melanesian Archipelago16740172008751007990921617
OUTPACE-SD573Melanesian Archipelago35346365845124679902144684141252
OUTPACE-SD573Melanesian Archipelago70667910589006651382
OUTPACE-SD573Melanesian Archipelago105137147700000
OUTPACE-SD6 77Melanesian Archipelago026853000216661000103483730
OUTPACE-SD677Melanesian Archipelago565552800116744400617215746
OUTPACE-SD677Melanesian Archipelago10502044101966461005798853167
OUTPACE-SD677Melanesian Archipelago1669929812337849001887187446
OUTPACE-SD677Melanesian Archipelago353604217367942410490233057204599
OUTPACE-SD677Melanesian Archipelago7057343755426303571395313581320
OUTPACE-SD677Melanesian Archipelago105415113215002391170
OUTPACE-SD7 81Melanesian Archipelago027624100278368600210308571253
OUTPACE-SD781Melanesian Archipelago5302432001578780000234205541
OUTPACE-SD781Melanesian Archipelago12370068002369016000301721559329
OUTPACE-SD781Melanesian Archipelago2157984002908781006932507106
OUTPACE-SD781Melanesian Archipelago45178291952535725231014976324128
OUTPACE-SD781Melanesian Archipelago901590187141431001094
OUTPACE-SD781Melanesian Archipelago11921800106200000
OUTPACE-SD8 85Melanesian Archipelago0115208268001613200
OUTPACE-SD885Melanesian Archipelago43585834102910000857800
OUTPACE-SD885Melanesian Archipelago1219460861042670001118300
OUTPACE-SD885Melanesian Archipelago21282654797191130008518730
OUTPACE-SD885Melanesian Archipelago4519340513805815161767581113671111001
OUTPACE-SD885Melanesian Archipelago905878113159685210000
OUTPACE-SD885Melanesian Archipelago13513060030600000
OUTPACE-SD9 89Melanesian Archipelago01201163654001595018760
OUTPACE-SD989Melanesian Archipelago5491160221660245063672357
OUTPACE-SD989Melanesian Archipelago125612273320002966838862026
OUTPACE-SD989Melanesian Archipelago213293012773900034626288614694
OUTPACE-SD989Melanesian Archipelago4576171283163509100546718021
OUTPACE-SD989Melanesian Archipelago90224924250100110
OUTPACE-SD989Melanesian Archipelago1311301212000100
OUTPACE-SD10 93Melanesian Archipelago0910515001138004910856131
OUTPACE-SD1093Melanesian Archipelago5903433007610074127926481
OUTPACE-SD1093Melanesian Archipelago12711040001055001365637421413
OUTPACE-SD1093Melanesian Archipelago213970170071200793017893188
OUTPACE-SD1093Melanesian Archipelago45127081165812218422008340797
OUTPACE-SD1093Melanesian Archipelago90975150213031500000
OUTPACE-SD1093Melanesian Archipelago1331112810034600
OUTPACE-SD11 97Melanesian Archipelago017074900130430011780
OUTPACE-SD1197Melanesian Archipelago550874311329050064414060
OUTPACE-SD1197Melanesian Archipelago122673571110236006633680
OUTPACE-SD1197Melanesian Archipelago213500252003440800010
OUTPACE-SD1197Melanesian Archipelago44289574792910656500185700
OUTPACE-SD1197Melanesian Archipelago90309493532660032210153
OUTPACE-SD1197Melanesian Archipelago1355520019200000
OUTPACE-SD12 101Melanesian Archipelago01297110011508700000
OUTPACE-SD12101Melanesian Archipelago4728831112989500000
OUTPACE-SD12101Melanesian Archipelago11175793101087980073510
OUTPACE-SD12101Melanesian Archipelago194591534103774660001910
OUTPACE-SD12101Melanesian Archipelago452946983127951362127072233497109110
OUTPACE-SD12101Melanesian Archipelago851108131500001
OUTPACE-SD12101Melanesian Archipelago12811121100100
OUTPACE-LDB 106Melanesian Archipelago02889550057600406181
OUTPACE-LDB106Melanesian Archipelago51893660025500040411
OUTPACE-LDB106Melanesian Archipelago729295000134900058511
OUTPACE-LDB106Melanesian Archipelago1249328800152800082311
OUTPACE-LDB106Melanesian Archipelago275025420017810004234410
OUTPACE-LDB106Melanesian Archipelago5610461121126001400
OUTPACE-LDB106Melanesian Archipelago826830011100000
OUTPACE-SD13 152Subtropical Gyre0
OUTPACE-SD13152Subtropical Gyre56409009095000110
OUTPACE-SD13152Subtropical Gyre15514250019649000100
OUTPACE-SD13152Subtropical Gyre2514177009236000000
OUTPACE-SD13152Subtropical Gyre450003280013800
OUTPACE-SD13152Subtropical Gyre6500018200000
OUTPACE-SD13152Subtropical Gyre85100181007600
OUTPACE-LDC 160Subtropical Gyre01104203003877181168
OUTPACE-LDC160Subtropical Gyre610036430002997872307
OUTPACE-LDC160Subtropical Gyre16100175700063494711006
OUTPACE-LDC160Subtropical Gyre27111195100033662042032
OUTPACE-LDC160Subtropical Gyre6074331978853365785490618733584211625
OUTPACE-LDC160Subtropical Gyre1201033800000
OUTPACE-LDC160Subtropical Gyre18000100000
OUTPACE-SD14 208Subtropical Gyre000034900100
OUTPACE-SD14208Subtropical Gyre5000000000
OUTPACE-SD14208Subtropical Gyre15000100100
OUTPACE-SD14208Subtropical Gyre2510024700010
OUTPACE-SD14208Subtropical Gyre560001002810
OUTPACE-SD14208Subtropical Gyre1100001830010610
OUTPACE-SD14208Subtropical Gyre165000100000
OUTPACE-SD15 211Subtropical Gyre000018000000
OUTPACE-SD15211Subtropical Gyre6100122000000
OUTPACE-SD15211Subtropical Gyre160001000000
OUTPACE-SD15211Subtropical Gyre26100470000000
OUTPACE-SD15211Subtropical Gyre580001000000
OUTPACE-SD15211Subtropical Gyre116000100000
OUTPACE-SD15211Subtropical Gyre174000100000