Not logged in
PANGAEA.
Data Publisher for Earth & Environmental Science

Stapp, Laura; Parker, Laura M; O'Connor, Wayne A; Bock, Christian; Ross, Pauline M; Pörtner, Hans-Otto; Lannig, Gisela (2018): Condition factor of wild and selected Saccostrea glomerata [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.884090, In supplement to: Stapp, L et al. (2018): Sensitivity to ocean acidification differs between populations of the Sydney rock oyster: Role of filtration and ion-regulatory capacities. Marine Environmental Research, 135, 103-113, https://doi.org/10.1016/j.marenvres.2017.12.017

Always quote citation above when using data! You can download the citation in several formats below.

RIS CitationBibTeX CitationShow MapGoogle Earth

Keyword(s):
Animalia; Benthic animals; Benthos; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Growth/Morphology; Laboratory experiment; Mollusca; Saccostrea glomerata; Single species; South Pacific; Temperate
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Coverage:
Latitude: -32.700000 * Longitude: 152.050000
Date/Time Start: 2015-03-01T00:00:00 * Date/Time End: 2015-03-31T00:00:00
Event(s):
Cromarty_Bay * Latitude: -32.700000 * Longitude: 152.050000 * Date/Time Start: 2015-03-01T00:00:00 * Date/Time End: 2015-03-31T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2017-12-14.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TypeTypeStapp, Laurastudy
SpeciesSpeciesStapp, Laura
Registration number of speciesReg spec noStapp, Laura
Uniform resource locator/link to referenceURL refStapp, LauraWoRMS Aphia ID
Experiment durationExp durationdaysStapp, Laura
Time point, descriptiveTime pointStapp, Laura
TableTabStapp, Laura
TreatmentTreatStapp, Laura
IdentificationIDStapp, Lauratank
10 CategoryCatStapp, Lauraoyster line
11 IdentificationIDStapp, Lauraanimal
12 Body mass, dryBM drymgStapp, Laura
13 Shell, dry massSDMgStapp, Laura
14 Condition factorCFStapp, Laura
15 SalinitySalStapp, Laura
16 Temperature, waterTemp°CStapp, Laura
17 pHpHStapp, LauraNBS scale
18 Alkalinity, totalATµmol/kgStapp, Laura
19 Carbon, inorganic, dissolvedDICµmol/kgStapp, Laura
20 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmStapp, LauraCalculated using CO2SYS
21 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetPaStapp, LauraCalculated using CO2SYS
22 Calcite saturation stateOmega CalStapp, LauraCalculated using CO2SYS
23 Aragonite saturation stateOmega ArgStapp, LauraCalculated using CO2SYS
24 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
25 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
26 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
27 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Size:
1670 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Type
(study)

Species

Reg spec no

URL ref
(WoRMS Aphia ID)

Exp duration [days]

Time point

Tab

Treat

ID
(tank)
10 
Cat
(oyster line)
11 
ID
(animal)
12 
BM dry [mg]
13 
SDM [g]
14 
CF
15 
Sal
16 
Temp [°C]
17 
pH
(NBS scale)
18 
AT [µmol/kg]
19 
DIC [µmol/kg]
20 
pCO2water_SST_wet [µatm]
(Calculated using CO2SYS)
21 
pCO2water_SST_wet [Pa]
(Calculated using CO2SYS)
22 
Omega Cal
(Calculated using CO2SYS)
23 
Omega Arg
(Calculated using CO2SYS)
24 
CSC flag
(Calculated using seacarb afte...)
25 
pH
(total scale, Calculated using...)
26 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
27 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
28 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
29 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
30 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
31 
Omega Arg
(Calculated using seacarb afte...)
32 
Omega Cal
(Calculated using seacarb afte...)
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Wild167642.2813.96
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Wild146541.6883.51
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Wild166240.8384.07
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Wild166741.7184.00
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Wild112330.0533.74
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Wild152728.4535.37
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Wild145027.9985.18
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Wild128730.0664.28
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Wild181234.5375246.55
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Selected145130.4144770.83
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Selected121534.1253560.44
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Selected131232.9833977.81
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Selected171732.9495211.08
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Selected161836.1094480.88
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Selected124238.3183241.30
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Selected124432.7213801.84
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Selected109130.7923543.13
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49prior to incubationTable 2Selected120632.4533716.14
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control1Wild6138837.4323.7134.5223.848.092399.492156.21540.3054.734.352.86157.9515.78538.40540.151959.87180.562.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control1Wild7155139.3793.9434.5223.848.092399.492156.21540.3054.734.352.86157.9515.78538.40540.151959.87180.562.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control1Wild8160626.9584.1534.5223.848.092399.492156.21540.3054.734.352.86157.9515.78538.40540.151959.87180.562.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control1Wild1091933.8902.7134.5223.848.092399.492156.21540.3054.734.352.86157.9515.78538.40540.151959.87180.562.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control2Wild7170636.3844.6934.5523.708.092399.492155.87536.6154.364.352.86157.9615.73534.76536.501959.45180.702.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control2Wild8160526.9585.9534.5523.708.092399.492155.87536.6154.364.352.86157.9615.73534.76536.501959.45180.702.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control2Wild9196238.7975.0634.5523.708.092399.492155.87536.6154.364.352.86157.9615.73534.76536.501959.45180.702.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control2Wild10168039.8124.2234.5523.708.092399.492155.87536.6154.364.352.86157.9615.73534.76536.501959.45180.702.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control3Wild695227.2213.5034.5523.868.092399.492155.66539.5554.664.362.86157.9515.75537.76539.501959.04180.882.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control3Wild7159544.4233.5934.5523.868.092399.492155.66539.5554.664.362.86157.9515.75537.76539.501959.04180.882.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control3Wild884028.6882.9334.5523.868.092399.492155.66539.5554.664.362.86157.9515.75537.76539.501959.04180.882.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control3Wild10150841.0493.6734.5523.868.092399.492155.66539.5554.664.362.86157.9515.75537.76539.501959.04180.882.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO21Wild7146233.3154.3934.5223.877.812399.492283.641128.76114.342.511.64157.6732.941125.181128.842146.73103.971.652.51
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO21Wild8139442.5803.2734.5223.877.812399.492283.641128.76114.342.511.64157.6732.941125.181128.842146.73103.971.652.51
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO21Wild9230937.1036.2234.5223.877.812399.492283.641128.76114.342.511.64157.6732.941125.181128.842146.73103.971.652.51
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO21Wild1094828.7753.2934.5223.877.812399.492283.641128.76114.342.511.64157.6732.941125.181128.842146.73103.971.652.51
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO22Wild6147530.8434.7834.5523.867.802399.492287.881161.66117.682.451.61157.6633.921157.901161.662152.32101.641.612.45
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO22Wild7156029.7575.2434.5523.867.802399.492287.881161.66117.682.451.61157.6633.921157.901161.662152.32101.641.612.45
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO22Wild8211633.4886.3234.5523.867.802399.492287.881161.66117.682.451.61157.6633.921157.901161.662152.32101.641.612.45
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO22Wild9127451.4712.4834.5523.867.802399.492287.881161.66117.682.451.61157.6633.921157.901161.662152.32101.641.612.45
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO23Wild7243136.5836.6534.7023.987.802399.492287.021161.66117.682.461.61157.6633.791158.091161.842151.12102.111.622.46
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO23Wild8184644.8694.1134.7023.987.802399.492287.021161.66117.682.461.61157.6633.791158.091161.842151.12102.111.622.46
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO23Wild9112935.9933.1434.7023.987.802399.492287.021161.66117.682.461.61157.6633.791158.091161.842151.12102.111.622.46
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO23Wild10128933.6723.8334.7023.987.802399.492287.021161.66117.682.461.61157.6633.791158.091161.842151.12102.111.622.46
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control1Selected7135835.5203.8234.5223.848.092399.492156.21540.3054.734.352.86157.9515.78538.40540.151959.87180.562.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control1Selected8148440.9183.6334.5223.848.092399.492156.21540.3054.734.352.86157.9515.78538.40540.151959.87180.562.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control1Selected9111439.0372.8534.5223.848.092399.492156.21540.3054.734.352.86157.9515.78538.40540.151959.87180.562.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control2Selected12120332.4713.7034.5523.708.092399.492155.87536.6154.364.352.86157.9615.73534.76536.501959.45180.702.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control2Selected7143737.6903.8134.5523.708.092399.492155.87536.6154.364.352.86157.9615.73534.76536.501959.45180.702.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control2Selected8129747.6342.7234.5523.708.092399.492155.87536.6154.364.352.86157.9615.73534.76536.501959.45180.702.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control3Selected10220342.9195.1334.5523.868.092399.492155.66539.5554.664.362.86157.9515.75537.76539.501959.04180.882.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control3Selected6142427.2215.2334.5523.868.092399.492155.66539.5554.664.362.86157.9515.75537.76539.501959.04180.882.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control3Selected7150939.0063.8734.5523.868.092399.492155.66539.5554.664.362.86157.9515.75537.76539.501959.04180.882.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2Control3Selected8126039.9653.1534.5523.868.092399.492155.66539.5554.664.362.86157.9515.75537.76539.501959.04180.882.864.36
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO21Selected6144330.1294.7934.5223.877.812399.492283.641128.76114.342.511.64157.6732.941125.181128.842146.73103.971.652.51
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO21Selected7178637.0854.8234.5223.877.812399.492283.641128.76114.342.511.64157.6732.941125.181128.842146.73103.971.652.51
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO21Selected8210141.6215.0534.5223.877.812399.492283.641128.76114.342.511.64157.6732.941125.181128.842146.73103.971.652.51
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO21Selected10162933.2264.9034.5223.877.812399.492283.641128.76114.342.511.64157.6732.941125.181128.842146.73103.971.652.51
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO22Selected6105343.6902.4134.5523.867.802399.492287.881161.66117.682.451.61157.6633.921157.901161.662152.32101.641.612.45
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO22Selected7117132.0293.6634.5523.867.802399.492287.881161.66117.682.451.61157.6633.921157.901161.662152.32101.641.612.45
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO22Selected8120236.6793.2834.5523.867.802399.492287.881161.66117.682.451.61157.6633.921157.901161.662152.32101.641.612.45
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO22Selected10150639.5743.8134.5523.867.802399.492287.881161.66117.682.451.61157.6633.921157.901161.662152.32101.641.612.45
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO23Selected689437.2812.4034.7023.987.802399.492287.021161.66117.682.461.61157.6633.791158.091161.842151.12102.111.622.46
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO23Selected790635.1442.5834.7023.987.802399.492287.021161.66117.682.461.61157.6633.791158.091161.842151.12102.111.622.46
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO23Selected9219333.5696.5334.7023.987.802399.492287.021161.66117.682.461.61157.6633.791158.091161.842151.12102.111.622.46
laboratorySaccostrea glomerata (mollusk)397183marinespecies.org49after the 7 week incubation experimentTable 2CO23Selected10190838.4404.9634.7023.987.802399.492287.021161.66117.682.461.61157.6633.791158.091161.842151.12102.111.622.46