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Teyssier, Aimeric; Rouffaer, Lieze Oscar; Saleh Hudin, Noraine; Strubbe, Diederik; Matthysen, Erik; Lens, Luc; White, Joël (2017): House sparrows (Passer domesticus) gut microbiota composition according to urbanisation gradient [dataset publication series]. PANGAEA, https://doi.org/10.1594/PANGAEA.883741, Supplement to: Teyssier, A et al. (2018): Inside the guts of the city: Urban-induced alterations of the gut microbiota in a wild passerine. Science of the Total Environment, 612, 1276-1286, https://doi.org/10.1016/j.scitotenv.2017.09.035

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Published: 2017-12-04 • DOI registered: 2018-01-01

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Abstract:
Urbanisation represents one of the most radical forms of terrestrial land use change and has been shown to lead to alterations in ecosystem functioning and community dynamics and changes in individual phenotypic traits. While the recent surge in microbiome studies has brought about a paradigm shift by which individuals cannot truly be considered independently of the bacterial communities they host, the role of gut microbiota in organismal response to human-induced environmental change is still scarcely studied. Here, we applied a metabarcoding approach to examine the impact of urbanisation on the gut microbiota of Passer domesticus. We found urbanisation to be associated to lower microbiota species diversity, modifications in taxonomic composition and community structure, and changes in functional composition.
Coverage:
Latitude: 51.050000 * Longitude: 4.300000
Date/Time Start: 0013-04-02T00:00:00 * Date/Time End: 2104-01-13T00:00:00
Event(s):
NBelgium * Latitude: 51.050000 * Longitude: 4.300000 * Location: Belgium * Method/Device: Biology (BIO)
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Size:
4 datasets

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Datasets listed in this publication series

  1. Teyssier, A; Rouffaer, LO; Saleh Hudin, N et al. (2018): Fasta files of house sparrow gut microbiota. https://doi.org/10.1594/PANGAEA.890983
  2. Teyssier, A; Rouffaer, LO; Saleh Hudin, N et al. (2017): House sparrows capture site characteristics and urbanisation ratio. https://doi.org/10.1594/PANGAEA.883737
  3. Teyssier, A; Rouffaer, LO; Saleh Hudin, N et al. (2017): Raw abundance of the functional characteristics of the House sparrow bacterial communities. https://doi.org/10.1594/PANGAEA.883739
  4. Teyssier, A; Rouffaer, LO; Saleh Hudin, N et al. (2017): House sparrows gut microbiota composition. https://doi.org/10.1594/PANGAEA.883738