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Li, Futian; Gao, Kunshan; Beardall, John (2018): Seawater carbonate chemistry and growth, nitrogen availability, photosynthesis of Thalassiosira pseudonana [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.880576

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Keyword(s):
Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chromista; Growth/Morphology; Laboratory experiment; Laboratory strains; Light; Macro-nutrients; Not applicable; Ochrophyta; Pelagos; Phytoplankton; Primary production/Photosynthesis; Single species; Thalassiosira pseudonana
Related to:
Li, Futian; Beardall, John; Gao, Kunshan; Sathyendranath, Shubha (2018): Diatom performance in a future ocean: interactions between nitrogen limitation, temperature, and CO2-induced seawater acidification. ICES Journal of Marine Science, 75(4), 1451-1464, https://doi.org/10.1093/icesjms/fsx239
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2017-09-13.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeLi, Futianstudy
2SpeciesSpeciesLi, Futian
3Registration number of speciesReg spec noLi, Futian
4Uniform resource locator/link to referenceURL refLi, FutianWoRMS Aphia ID
5TreatmentTreatLi, Futian
6ReplicateReplLi, Futian
7Growth rateµ1/dayLi, Futian
8Cell sizeCell sizeµmLi, Futian
9Chlorophyll a per cellChl a/cellpg/#Li, Futian
10Biogenic silica, per cellbSiO2/cellfmol/#Li, Futian
11Particulate organic carbon, per cellPOC/cellpmol/#Li, Futian
12Particulate organic nitrogen per cellPON/cellpmol/#Li, Futian
13Carbon/Nitrogen ratioC/NLi, Futian
14Silicon/Carbon, molar ratioSi/CLi, Futian
15IrradianceEµmol/m2/sLi, Futian
16Electron transport rate of photosystem IIETR PSIILi, Futianrelative
17Photosynthetic carbon fixation rate, per cellC fix/cellpg/#/hLi, Futian
18Respiration rate, oxygen, per cellResp O2/cellfmol/#/hLi, FutianDark
19Maximum photochemical quantum yield of photosystem IIFv/FmLi, Futian
20Effective photochemical quantum yieldphi PS IILi, Futian
21Slope to saturation of photocentersalphaLi, Futian
22Maximal electron transport rate, relativerETR maxLi, Futian
23Light saturation pointIkµmol/m2/sLi, Futian
24SalinitySalLi, Futian
25Temperature, waterTemp°CLi, Futian
26Nitrate[NO3]-µmol/lLi, Futian
27pHpHLi, FutianNBS scale
28Alkalinity, totalATµmol/kgLi, Futian
29Carbon, inorganic, dissolvedDICµmol/kgLi, Futian
30Bicarbonate ion[HCO3]-µmol/kgLi, Futian
31Carbon dioxideCO2µmol/kgLi, Futian
32Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
34Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
38Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
8424 data points

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