Citation:

PANGAEA.879615

Name: Seawater carbonate chemistry and biomass composition, primary productivity, photophysiological characteristics of subarctic phytoplankton assemblages
Published: 2017-08-15
License: https://creativecommons.org/licenses/by/3.0/
Keywords: Arctic; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Community composition and diversity; Entire community; Laboratory experiment; Light; Open ocean; Pelagos; Polar; Primary production/Photosynthesis

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Keyword(s):

Arctic; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Community composition and diversity; Entire community; Laboratory experiment; Light; Open ocean; Pelagos; Polar; Primary production/Photosynthesis

Related to:

Hoppe, Clara Jule Marie; Schuback, Nina; Semeniuk, David M; Maldonado, Maria T; Rost, Björn (2017): Functional Redundancy Facilitates Resilience of Subarctic Phytoplankton Assemblages toward Ocean Acidification and High Irradiance. Frontiers in Marine Science, 4, 14 pp, https://doi.org/10.3389/fmars.2017.00229

Original version:

Hoppe, Clara Jule Marie; Schuback, Nina; Semeniuk, David M; Maldonado, Maria T; Rost, Björn (2017): Functional redundancy facilitates resilience of subarctic phytoplankton assemblages toward ocean acidification and high irradiance, link to supplement in MS Excel format. PANGAEA, https://doi.org/10.1594/PANGAEA.878253

Further details:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Coverage:

Latitude: 63.964280 * Longitude: -60.125870

Date/Time Start: 2015-07-15T00:00:00 * Date/Time End: 2015-07-29T00:00:00

Event(s):

Davis_Strait * Latitude: 63.964280 * Longitude: -60.125870 * Date/Time Start: 2015-07-15T00:00:00 * Date/Time End: 2015-07-29T00:00:00 * Method/Device: Experiment (EXP)

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2017-08-15.

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Type	Type		Hoppe, Clara Jule Marie		study
2	Experiment duration	Exp duration	days	Hoppe, Clara Jule Marie
3	Time point, descriptive	Time point		Hoppe, Clara Jule Marie
4	Treatment	Treat		Hoppe, Clara Jule Marie
5	Treatment	Treat		Hoppe, Clara Jule Marie
6	Identification	ID		Hoppe, Clara Jule Marie		Bottle
7	Chlorophyll a	Chl a	µg/l	Hoppe, Clara Jule Marie		total
8	Chlorophyll a	Chl a	%	Hoppe, Clara Jule Marie		Chl a >5 mm
9	Carbon, organic, particulate	POC	µmol/l	Hoppe, Clara Jule Marie
10	Nitrogen, organic, particulate	PON	µmol/l	Hoppe, Clara Jule Marie
11	Biogenic silica	bSiO2	µmol/l	Hoppe, Clara Jule Marie
12	Carbon, organic, particulate/Nitrogen, organic, particulate ratio	POC/PON		Hoppe, Clara Jule Marie
13	Carbon/Chlorophyll a ratio	C/Chl a		Hoppe, Clara Jule Marie
14	Carbon, organic, particulate/Biogenic silica	POC/bSiO2		Hoppe, Clara Jule Marie
15	Picoplankton per particulate organic carbon	Picopl/POC	#/ng	Hoppe, Clara Jule Marie
16	Primary production of carbon per chlorophyll a	PP C/Chl a	µg/µg/day	Hoppe, Clara Jule Marie
17	Net primary production of carbon per particulate organic carbon	NPP C/POC	µmol/µmol/day	Hoppe, Clara Jule Marie
18	Light-depended increase in initial charge separation in reaction center II	alpha ETR RCII	(mol electrons/mol RCII)/(µmol quanta/m²)	Hoppe, Clara Jule Marie
19	Confidence interval	CI		Hoppe, Clara Jule Marie		95%
20	Light-depended increase in 14C uptake	alpha C fix	(mol C/mol Chl a)/(µmol quanta/m²)	Hoppe, Clara Jule Marie
21	Confidence interval	CI		Hoppe, Clara Jule Marie		95%
22	Light saturated rate of initial charge separation in reaction center II, maximum	Pmax ETR RCII	mol electrons/mol RCII/s	Hoppe, Clara Jule Marie
23	Confidence interval	CI		Hoppe, Clara Jule Marie		95%
24	Light saturated rate of initial charge separation in 14C uptake, maximum	Pmax C fix	mol electrons/mol Chl a/s	Hoppe, Clara Jule Marie
25	Confidence interval	CI		Hoppe, Clara Jule Marie		95%
26	Light saturation	Ek	µmol/m²/s	Hoppe, Clara Jule Marie		initial charge separation in reaction center II
27	Confidence interval	CI		Hoppe, Clara Jule Marie		95%
28	Light saturation	Ek	µmol/m²/s	Hoppe, Clara Jule Marie		initial charge separation in 14C uptake
29	Confidence interval	CI		Hoppe, Clara Jule Marie		95%
30	Light-depended increase in conversion factors	alpha Kc/n PSII		Hoppe, Clara Jule Marie
31	Confidence interval	CI		Hoppe, Clara Jule Marie		95%
32	Light saturated rate of initial charge separation in conversion factors, maximum	Pmax Kc/n PSII		Hoppe, Clara Jule Marie
33	Confidence interval	CI		Hoppe, Clara Jule Marie		95%
34	Nitrate	[NO3]-	µmol/l	Hoppe, Clara Jule Marie
35	Nitrate, standard deviation	NO3 std dev	±	Hoppe, Clara Jule Marie
36	Phosphate	[PO4]3-	µmol/l	Hoppe, Clara Jule Marie
37	Phosphate, standard deviation	[PO4]3- std dev	±	Hoppe, Clara Jule Marie
38	Silicate	Si(OH)4	µmol/l	Hoppe, Clara Jule Marie
39	Silicate, standard deviation	Si(OH)4 std dev	±	Hoppe, Clara Jule Marie
40	Salinity	Sal		Hoppe, Clara Jule Marie
41	Temperature, water	Temp	°C	Hoppe, Clara Jule Marie
42	Temperature, water, standard deviation	Temp std dev	±	Hoppe, Clara Jule Marie
43	Alkalinity, total	AT	µmol/kg	Hoppe, Clara Jule Marie	Potentiometric titration
44	Alkalinity, total, standard deviation	AT std dev	±	Hoppe, Clara Jule Marie	Potentiometric titration
45	Carbon, inorganic, dissolved	DIC	µmol/kg	Hoppe, Clara Jule Marie	Potentiometric titration
46	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Hoppe, Clara Jule Marie	Potentiometric titration
47	pH	pH		Hoppe, Clara Jule Marie		total scale
48	pH, standard deviation	pH std dev	±	Hoppe, Clara Jule Marie		total scale
49	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Hoppe, Clara Jule Marie
50	Partial pressure of carbon dioxide, standard deviation	pCO2 std dev	±	Hoppe, Clara Jule Marie
51	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
52	pH	pH		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	total scale
53	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
54	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
55	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
56	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
57	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
58	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
59	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)

License:

Creative Commons Attribution 3.0 Unported (CC-BY-3.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

1181 data points

Data

Download dataset as tab-delimited text — use the following character encoding:

1 Type (study)	2 Exp duration [days]	3 Time point	4 Treat	5 Treat	6 ID (Bottle)	7 Chl a [µg/l] (total)	8 Chl a [%] (Chl a >5 mm)	9 POC [µmol/l]	10 PON [µmol/l]	11 bSiO2 [µmol/l]	12 POC/PON	13 C/Chl a	14 POC/bSiO2	15 Picopl/POC [#/ng]	16 PP C/Chl a [µg/µg/day]	17 NPP C/POC [µmol/µmol/day]	18 alpha ETR RCII [(mol electrons/mol RCII)/(µmol quanta/m²)]	19 CI (95%)	20 alpha C fix [(mol C/mol Chl a)/(µmol quanta/m²)]	21 CI (95%)	22 Pmax ETR RCII [mol electrons/mol RCII/s]	23 CI (95%)	24 Pmax C fix [mol electrons/mol Chl a/s]	25 CI (95%)	26 Ek [µmol/m²/s] (initial charge separation in ...)	27 CI (95%)	28 Ek [µmol/m²/s] (initial charge separation in ...)	29 CI (95%)	30 alpha Kc/n PSII	31 CI (95%)	32 Pmax Kc/n PSII	33 CI (95%)	34 [NO3]- [µmol/l]	35 NO3 std dev [±]	36 [PO4]3- [µmol/l]	37 [PO4]3- std dev [±]	38 Si(OH)4 [µmol/l]	39 Si(OH)4 std dev [±]	40 Sal	41 Temp [°C]	42 Temp std dev [±]	43 AT [µmol/kg] (Potentiometric titration)	44 AT std dev [±] (Potentiometric titration)	45 DIC [µmol/kg] (Potentiometric titration)	46 DIC std dev [±] (Potentiometric titration)	47 pH (total scale)	48 pH std dev [±] (total scale)	49 pCO2water_SST_wet [µatm]	50 pCO2 std dev [±]	51 CSC flag (Calculated using seacarb afte...)	52 pH (total scale, Calculated using...)	53 CO2 [µmol/kg] (Calculated using seacarb afte...)	54 fCO2water_SST_wet [µatm] (Calculated using seacarb afte...)	55 pCO2water_SST_wet [µatm] (Calculated using seacarb afte...)	56 [HCO3]- [µmol/kg] (Calculated using seacarb afte...)	57 [CO3]2- [µmol/kg] (Calculated using seacarb afte...)	58 Omega Arg (Calculated using seacarb afte...)	59 Omega Cal (Calculated using seacarb afte...)
laboratory	14	initial	Low light			0.41	59.31	3.83	0.47	0.25	8.18	0.009	0.07	98	3.12	0.03																	8.07	0.01	0.781	0.001	7.95	0.02	33.445	-1.60		2271		2145		8.11		322		15	8.11	21.81	322.60	324.05	2026.72	96.47	1.46	2.33
laboratory	14	initial	High light			0.41	59.31	3.83	0.47	0.25	8.18	0.009	0.07	98	2.09	0.02																	8.07	0.01	0.781	0.001	7.95	0.02	33.445	-1.60		2271		2145		8.11		322		15	8.11	21.81	322.60	324.05	2026.72	96.47	1.46	2.33
laboratory	14	dilution	Low light	Low pCO2	A	6.32	37.98	38.27	4.73	1.83	8.08	0.014	0.05	792	23.05	0.32																							32.670	5.67		2289		2127		8.05		382		15	8.10	18.01	349.08	350.51	1988.65	120.73	1.84	2.92
laboratory	14	dilution	Low light	Low pCO2	B	6.46	31.76	37.16	5.62	1.72	6.61	0.014	0.05	745	22.55	0.33																							32.670	5.67		2306		2112		8.13		316		15	8.17	15.00	290.72	291.91	1956.67	140.34	2.13	3.39
laboratory	14	dilution	Low light	Low pCO2	C	5.37	40.29	36.56	3.98	1.85	9.18	0.012	0.05	653	28.34	0.35																							32.670	5.67		2311		2121		8.12		324		15	8.16	15.37	297.81	299.03	1966.75	138.41	2.10	3.34
laboratory	14	dilution	Low light	High pCO2	A	5.67	33.75	42.39	5.17		8.20	0.011		714	21.95	0.24																							32.670	5.67		2301		2269		7.65		1046		15	7.71	48.04	930.93	934.75	2166.95	53.75	0.82	1.30
laboratory	14	dilution	Low light	High pCO2	B	5.95	31.37	38.47	4.78	1.62	8.05	0.013	0.04	929	25.14	0.32																							32.670	5.67		2300		2272		7.63		1086		15	7.69	49.87	966.53	970.48	2170.26	51.93	0.79	1.26
laboratory	14	dilution	Low light	High pCO2	C	6.09	30.06	40.73	4.93	1.42	8.26	0.012	0.03	832																									32.670	5.67		2298		2269		7.64		1073		15	7.70	49.27	954.93	958.84	2167.58	52.43	0.80	1.27
laboratory	14	dilution	High light	Low pCO2	A	11.30	72.44	58.04	8.94	4.62	6.49	0.016	0.08	212	49.44	0.80																							32.670	5.42		2283		2094		8.12		318		15	8.16	15.19	291.68	292.88	1942.98	136.28	2.07	3.29
laboratory	14	dilution	High light	Low pCO2	B	10.95	75.36	56.97	7.59	6.20	7.50	0.016	0.11	313	42.69	0.68																							32.670	5.42		2300		2111		8.12		321		15	8.16	15.34	294.68	295.88	1958.80	137.10	2.08	3.31
laboratory	14	dilution	High light	Low pCO2	C	12.39	78.05	59.70	8.50	5.04	7.02	0.017	0.08	222	53.64	0.93																							32.670	5.42		2286		2100		8.11		325		15	8.15	15.50	297.79	299.01	1950.38	134.50	2.04	3.25
laboratory	14	dilution	High light	High pCO2	A	8.72	70.10	46.04	8.13	3.29	5.67	0.016	0.07	233	36.97	0.58																							33.445	5.42		2304		2250		7.72		873		15	7.78	40.40	779.62	782.82	2146.02	63.21	0.96	1.52
laboratory	14	dilution	High light	High pCO2	B	9.60	70.61	59.02	7.16	3.99	8.24	0.014	0.07	225	39.70	0.54																							33.445	5.42		2280		2240		7.67		973		15	7.73	44.91	866.66	870.22	2138.16	56.44	0.86	1.36
laboratory	14	dilution	High light	High pCO2	C	10.47	64.76	51.58	8.57	3.94	6.02	0.017	0.08	312	38.67	0.65																							33.445	5.42		2289		2235		7.72		867		15	7.78	40.07	773.27	776.44	2131.92	62.89	0.95	1.51
laboratory	14	final	Low light	Low pCO2	A	17.19	83.34	66.94	10.29	8.44	6.51	0.021	0.13	162	46.31	0.99																							33.445	9.10		2288		2048		8.19		265		15	8.20	11.96	262.13	263.15	1866.49	169.39	2.58	4.07
laboratory	14	final	Low light	Low pCO2	B	14.26	80.12	62.66	7.75	7.25	8.08	0.019	0.12	153	45.25	0.86																							33.445	9.10		2284		2051		8.18		274		15	8.19	12.36	270.95	272.01	1873.26	165.07	2.51	3.97
laboratory	14	final	Low light	Low pCO2	C	12.21	83.56	56.56	8.75	7.24	6.46	0.018	0.13	191	38.46	0.69																							33.445	9.10		2278		2064		8.14		303		15	8.15	13.70	300.26	301.44	1897.25	152.79	2.33	3.67
laboratory	14	final	Low light	High pCO2	A	10.51	80.06	49.87	6.25	4.89	7.98	0.018	0.10	164	45.57	0.80																							33.445	9.10		2288		2226		7.74		853		15	7.75	38.49	843.61	846.91	2119.23	67.85	1.03	1.63
laboratory	14	final	Low light	High pCO2	B	9.77	75.78	51.77	6.82	5.88	7.59	0.016	0.11	126	44.98	0.71																							33.445	9.10		2293		2231		7.74		855		15	7.75	38.57	845.54	848.85	2124.03	68.01	1.04	1.64
laboratory	14	final	Low light	High pCO2	C	7.83	75.65	47.42	5.99	5.27	7.91	0.014	0.11	130																									33.445	9.10		2282		2229		7.71		918		15	7.72	41.41	907.61	911.16	2123.88	63.35	0.96	1.52
laboratory	14	final	High light	Low pCO2	A	16.79	87.89	102.67	12.91	13.11	7.95	0.014	0.13	19	46.55	0.63																							33.445	8.40		2282		2042		8.21		254		15	8.22	11.75	251.55	252.54	1860.17	169.64	2.58	4.08
laboratory	14	final	High light	Low pCO2	B	22.03	92.32	111.93	11.68	15.87	9.59	0.016	0.14	31	42.24	0.69																							33.445	8.40						8.23
laboratory	14	final	High light	Low pCO2	C	17.45	87.88	111.31	12.88	12.49	8.64	0.013	0.11	52	54.00	0.70																							33.445	8.40		2284		2026		8.24		232		15	8.25	10.73	229.76	230.66	1834.64	180.66	2.75	4.35
laboratory	14	final	High light	High pCO2	A	16.10	79.99	77.75	11.74	11.12	6.62	0.017	0.14	93	41.58	0.72																							33.445	8.40		2287		2235		7.71		902		15	7.73	41.67	892.13	895.65	2130.81	62.76	0.95	1.51
laboratory	14	final	High light	High pCO2	B	17.56	87.58	73.82	10.62	9.74	6.95	0.020	0.13		32.41	0.64																							33.445	8.40		2276		2231		7.69		949		15	7.70	43.87	939.14	942.85	2127.72	59.45	0.90	1.43
laboratory	14	final	High light	High pCO2	C	14.53	82.70	79.54	10.75	10.81	7.40	0.015	0.14	32	50.93	0.77																							33.445	8.40		2288		2255		7.65		1050		15	7.66	48.51	1038.54	1042.65	2151.18	54.95	0.84	1.32
laboratory	14	initial															3.060500000	7.8375	0.000300000	0.0001	85.7719000	31.0524	0.051500000	0.0108	28.02550000	0.0468	162.00000000	68	9611.000000		1665.000000								33.445	-1.60		2271		2145		8.11		322		15	8.11	21.81	322.60	324.05	2026.72	96.47	1.46	2.33
laboratory	14	dilution	Low light	Low pCO2													2.456323989	0.1200	0.000880411	0.0002	213.9572030	3.0000	0.059342256	0.0040	87.10463438	4.0000	67.40286520	14	2789.972720	577	3605.478091	228							32.670	5.70	0.1	2302	11	2120	8	8.10	0.04	341	36	15	8.14	16.13	312.54	313.82	1970.69	133.16	2.02	3.22
laboratory	14	dilution	Low light	High pCO2													2.884202685	0.2400	0.001066470	0.0002	220.1962726	5.0000	0.062696736	0.0040	76.34563056	7.0000	58.78904584	12	2704.439429	593	3512.085126	221							32.670	5.70	0.1	2300	1	2270	2	7.64	0.01	1068	20	15	7.70	49.06	950.80	954.69	2168.26	52.70	0.80	1.27
laboratory	14	dilution	High light	Low pCO2													1.999752357	0.2900	0.001157136	0.0003	307.7427992	15.0000	0.091323882	0.0070	153.89045460	23.0000	78.92237342	19	1728.191993	466	3369.795407	298							32.670	5.40	0.2	2289	9	2102	9	8.12	0.01	321	3	15	8.16	15.34	294.71	295.92	1950.72	135.96	2.07	3.29
laboratory	14	dilution	High light	High pCO2													2.043915380	0.3000	0.000917792	0.0001	338.6408551	16.0000	0.082883063	0.0050	165.68242430	25.0000	90.30698254	15	2226.990950	478	4085.766672	300							32.670	5.40	0.2	2291	12	2241	8	7.71	0.03	904	60	15	7.76	41.80	806.51	809.83	2138.70	60.85	0.92	1.46
laboratory	14	final	Low light	Low pCO2													2.225364522	0.1600	0.001088081	0.0003	178.7527723	4.0000	0.066037632	0.0060	80.32516494	31.0000	61.00000000	18	2045.219897	588	2706.831967	235							33.445	9.10	0.4	2283	5	2054	8	8.17	0.03	281	20	15	8.18	12.67	277.78	278.87	1879.00	162.42	2.47	3.91
laboratory	14	final	Low light	High pCO2													2.214286597	0.3100	0.000990177	0.0002	167.6218548	6.0000	0.061566988	0.0040	70.85470736	38.0000	62.00000000	15	2236.253920	618	2722.593073	215							33.445	9.10	0.4	2288	6	2228	3	7.73	0.02	875	37	15	7.74	39.49	865.59	868.97	2122.38	66.40	1.01	1.60
laboratory	14	final	High light	Low pCO2													2.008367456	0.4600	0.001042997	0.0003	190.2563736	14.0000	0.065168055	0.0060	71.04378669	49.0000	62.00000000	19	1925.573968	705	2919.472939	333							33.445	8.40	0.3	2283	1	2034	11	8.22	0.02	243	16	15	8.23	11.24	240.65	241.60	1847.41	175.15	2.66	4.21
laboratory	14	final	High light	High pCO2													1.897485904	0.2700	0.000707522	0.0003	200.0417334	11.0000	0.047754030	0.0050	113.26167370	61.0000	67.00000000	26	2681.873594	1057	4189.002105	527							33.445	8.40	0.3	2284	7	2240	13	7.69	0.03	967	76	15	7.70	44.69	956.60	960.38	2136.57	59.05	0.90	1.42