Citation:

fwb.13100

Name: Individual-based landscape and environmental factors and ranavirus epidemiology in an amphibian assemblage within the East Bay region, California
Published: 2017-08-07
License: https://creativecommons.org/licenses/by-nc/3.0/

Always quote citation above when using data! You can download the citation in several formats below.

Published: 2017-08-07 • DOI registered: 2017-09-04

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New version:

Tornabene, Brian J; Hoverman, Jason T (2018): The influence of landscape and environmental factors on ranavirus epidemiology in a California amphibian assemblage. Purdue University Research Repository, https://doi.org/10.4231/R7MW2FBT

Source:

Original files in xls/csv format [dataset]. Tornabene_original.zip

Coverage:

Median Latitude: 37.551491 * Median Longitude: -121.914350 * South-bound Latitude: 37.085614 * West-bound Longitude: -122.244778 * North-bound Latitude: 37.961364 * East-bound Longitude: -121.639640

Date/Time Start: 2013-05-09T00:00:00 * Date/Time End: 2013-08-13T00:00:00

Minimum ORDINAL NUMBER: 1 * Maximum ORDINAL NUMBER: 1085

Event(s):

East_Bay_CA * Latitude Start: 37.970000 * Longitude Start: -122.240000 * Latitude End: 37.080000 * Longitude End: -121.600000 * Location: California, USA * Method/Device: Biology (BIO)

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Comment
1	ORDINAL NUMBER	Ord No		Tornabene, Brian J	Geocode
2	Code	Code		Tornabene, Brian J	dissection code
3	Comment	Comment		Tornabene, Brian J	dissected (0/1)
4	Sampling date	Sampling date		Tornabene, Brian J	year
5	Code	Code		Tornabene, Brian J	site code
6	Number	No		Tornabene, Brian J	retained from previous database
7	Code	Code		Tornabene, Brian J	State wildlife refuge
8	Comment	Comment		Tornabene, Brian J	dissector initials
9	Code	Code		Tornabene, Brian J	of species
10	DATE/TIME	Date/Time		Tornabene, Brian J	Geocode
11	Sampling date	Sampling date		Tornabene, Brian J	month
12	Life stage	Life stage		Tornabene, Brian J
13	Number	No		Tornabene, Brian J	excluded from analysis
14	Length, total	TL	mm	Tornabene, Brian J
15	Sex	Sex		Tornabene, Brian J	male, female or unknown
16	Length	l	mm	Tornabene, Brian J	Snout-vent length
17	Score	Score		Tornabene, Brian J	Z scores for snout length calculated by species
18	Length	l	mm	Tornabene, Brian J	of tail
19	Comment	Comment		Tornabene, Brian J	malformation (0/1)
20	Echinostoma	Echinostoma	#	Tornabene, Brian J	in infected animals
21	Presence/absence	Presence/absence		Tornabene, Brian J	infection with Echinostoma
22	Ribeiroia ondatrae	R. ondatrae	#	Tornabene, Brian J	in infected animals
23	Presence/absence	Presence/absence		Tornabene, Brian J	infection with Ribeiroia ondatrae
24	Presence/absence	Presence/absence		Tornabene, Brian J	infection with Ranavirus
25	Number	No		Tornabene, Brian J	Ranavirus load of infected individuals
26	Presence/absence	Presence/absence		Tornabene, Brian J	infection with Batrachochytrium dendrobatidis
27	Number	No		Tornabene, Brian J	Average amphibian batrachochytrium dendrobatidis load
28	Site	Site		Tornabene, Brian J
29	Number	No		Tornabene, Brian J	From wetland with ranavirus infection RVPS
30	LATITUDE	Latitude		Tornabene, Brian J	Geocode
31	LONGITUDE	Longitude		Tornabene, Brian J	Geocode
32	Distance to landmark	Distance	arbitrary units	Tornabene, Brian J	Euclidean, nearest neighbor Great Circle
33	Distance to landmark	Distance	arbitrary units	Tornabene, Brian J	Euclidean, nearest neighbor Great Circle *1000
34	Distance	Distance	km	Tornabene, Brian J	Euclidean, to nearest wetland
35	Distance	Distance	km	Tornabene, Brian J	Euclidean, to nearest Ranavirus infected wetland
36	Presence/absence	Presence/absence		Tornabene, Brian J	Pond
37	Vegetation, cover	Veg cov	%	Tornabene, Brian J	shoreline
38	Percentage	Perc	%	Tornabene, Brian J	wetland
39	Land use	Land use		Tornabene, Brian J
40	Percentage	Perc	%	Tornabene, Brian J	forest surrounding
41	Perimeter	Perimeter	m	Tornabene, Brian J	of pond
42	Area	Area	m²	Tornabene, Brian J	of pond
43	Presence/absence	Presence/absence		Tornabene, Brian J	of cattle
44	Presence/absence	Presence/absence		Tornabene, Brian J	of fish
45	Presence/absence	Presence/absence		Tornabene, Brian J	of bullfrogs
46	Presence/absence	Presence/absence		Tornabene, Brian J	of Batrachochytrium dendrobatidis
47	Conductivity, electrolytic	EC	µS/cm	Tornabene, Brian J
48	Total dissolved solids	TDS	mg/l	Tornabene, Brian J
49	Salinity	Sal		Tornabene, Brian J
50	pH	pH		Tornabene, Brian J
51	Nitrogen, total	TN	mg/l	Tornabene, Brian J
52	Carbon, organic, dissolved	DOC	mg/l	Tornabene, Brian J
53	Ammonium	[NH4]+	mg/l	Tornabene, Brian J
54	Number	No		Tornabene, Brian J	of sweeps
55	Area	Area	m²	Tornabene, Brian J	calculated via GIS
56	Amphibia	Amphibia	#	Tornabene, Brian J	per seine
57	Amphibia	Amphibia	#	Tornabene, Brian J	per sweep
58	Amphibia	Amphibia	#	Tornabene, Brian J	per sweep and seine
59	Larvae	Larvae	#	Tornabene, Brian J	amphibian larvae
60	Larvae	Larvae	#	Tornabene, Brian J	amphibian larvae without TAGR
61	Invertebrata	Invert	#	Tornabene, Brian J
62	Fish	Fish	#	Tornabene, Brian J
63	Vertebrata	Vertebrata	#	Tornabene, Brian J	fishes and amphibians
64	Total counts	Total counts	#	Tornabene, Brian J	all
65	Total counts	Total counts	#	Tornabene, Brian J	native

License:

Creative Commons Attribution-NonCommercial 3.0 Unported (CC-BY-NC-3.0)

Size:

63875 data points

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