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Kurman, Melissa; Gómez, C E; Georgian, Samuel E; Lunden, Jay J; Cordes, Erik E (2017): Seawater carbon chemistry and calcification,carbonic anhydrase activity of cold-water coral Lophelia pertusa [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.877984, Supplement to: Kurman, M et al. (2017): Intra-Specific Variation Reveals Potential for Adaptation to Ocean Acidification in a Cold-Water Coral from the Gulf of Mexico. Frontiers in Marine Science, 4, https://doi.org/10.3389/fmars.2017.00111

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Abstract:
Ocean acidification, the decrease in seawater pH due to the absorption of atmospheric CO2, profoundly threatens the survival of a large number of marine species. Cold-water corals are considered to be among the most vulnerable organisms to ocean acidification because they are already exposed to relatively low pH and corresponding low calcium carbonate saturation states (Omega). Lophelia pertusa is a globally distributed cold-water scleractinian coral that provides critical three-dimensional habitat for many ecologically and economically significant species. In this study, four different genotypes of L. pertusa were exposed to three pH treatments (pH=7.60, 7.75, and 7.90) over a short (two-week) experimental period, and six genotypes were exposed to two pH treatments (pH=7.60, and 7.90) over a long (six-month) experimental period. Their physiological response was measured as net calcification rate and the activity of carbonic anhydrase, a key enzyme in the calcification pathway. In the short-term experiment, net calcification rates did not significantly change with pH, although they were highly variable in the low pH treatment, including some genotypes that maintained positive net calcification in undersaturated conditions. In the six-month experiment, average net calcification was significantly reduced at low pH, with corals exhibiting net dissolution of skeleton. However, one of the same genotypes that maintained positive net calcification (+0.04% day-1) under the low pH treatment in the short-term experiment also maintained positive net calcification longer than the other genotypes in the long-term experiment, although none of the corals maintained positive calcification for the entire 6 months. Average carbonic anhydrase activity was not affected by pH, although some genotypes exhibited small, insignificant, increases in activity after the sixth month. Our results suggest that while net calcification in L. pertusa is adversely affected by ocean acidification in the long term, it is possible that some genotypes may prove to be more resilient than others, particularly to short perturbations of the carbonate system. These results provide evidence that populations of L. pertusa in the Gulf of Mexico may contain the genetic variability necessary to support an adaptive response to future ocean acidification.
Keyword(s):
Animalia; Benthic animals; Benthos; Calcification/Dissolution; Cnidaria; Containers and aquaria (20-1000 L or < 1 m**2); Deep-sea; Laboratory experiment; Lophelia pertusa; North Atlantic; Single species; Temperate
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Coverage:
Median Latitude: 29.168128 * Median Longitude: -88.017670 * South-bound Latitude: 29.156100 * West-bound Longitude: -88.019000 * North-bound Latitude: 29.173000 * East-bound Longitude: -88.015000
Date/Time Start: 2014-08-19T00:00:00 * Date/Time End: 2014-09-02T00:00:00
Minimum DEPTH, water: 451 m * Maximum DEPTH, water: 494 m
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2017-07-19.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeKurman, Melissastudy
2SpeciesSpeciesKurman, Melissa
3Registration number of speciesReg spec noKurman, Melissa
4Uniform resource locator/link to referenceURL refKurman, MelissaWoRMS Aphia ID
5Experiment durationExp durationdaysKurman, Melissa
6Experiment durationExp durationmonthsKurman, Melissa
7Incubation durationInc durmonthsKurman, Melissa
8ExperimentExpKurman, Melissa
9TreatmentTreatKurman, Melissa
10ReplicateReplKurman, Melissa
11SiteSiteKurman, MelissaSample Site
12GenotypeGenotypeKurman, Melissa
13LATITUDELatitudeKurman, MelissaGeocode
14LONGITUDELongitudeKurman, MelissaGeocode
15DEPTH, waterDepth watermKurman, MelissaGeocode
16IdentificationIDKurman, MelissaFragment
17DATE/TIMEDate/TimeKurman, MelissaGeocode
18Time, incubationT incubationdayKurman, Melissa
19Buoyant massM buoyantmgKurman, MelissaA
20Buoyant massM buoyantmgKurman, MelissaB
21Buoyant massM buoyantmgKurman, MelissaC
22Buoyant massM buoyantmgKurman, Melissaaverage
23IdentificationIDKurman, Melissawebsite
24DensityDensityg/cm3Kurman, Melissaseawater
25Dry massDry mgKurman, Melissa
26Mass changeMass chngKurman, Melissa
27Calcification rateCalc rate%/dayKurman, Melissa
28Time point, descriptiveTime pointKurman, Melissa
29Carbonic anhydrase activity, per tissue weightCA actEU/mgKurman, Melissa
30Temperature, waterTemp°CKurman, Melissa
31Temperature, water, standard deviationTemp std dev±Kurman, Melissa
32pHpHKurman, MelissaPotentiometrictotal scale
33pH, standard deviationpH std dev±Kurman, MelissaPotentiometrictotal scale
34SalinitySalKurman, Melissa
35Salinity, standard deviationSal std dev±Kurman, Melissa
36Alkalinity, totalATµmol/kgKurman, MelissaPotentiometric titration
37Alkalinity, total, standard deviationAT std dev±Kurman, MelissaPotentiometric titration
38Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmKurman, MelissaCalculated using CO2calc
39Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Kurman, MelissaCalculated using CO2calc
40Bicarbonate ion[HCO3]-µmol/kgKurman, MelissaCalculated using CO2calc
41Bicarbonate ion, standard deviation[HCO3]- std dev±Kurman, MelissaCalculated using CO2calc
42Carbon dioxideCO2µmol/kgKurman, MelissaCalculated using CO2calc
43Carbon dioxide, standard deviationCO2 std dev±Kurman, MelissaCalculated using CO2calc
44Carbonate ion[CO3]2-µmol/kgKurman, MelissaCalculated using CO2calc
45Carbonate ion, standard deviation[CO3]2- std dev±Kurman, MelissaCalculated using CO2calc
46Aragonite saturation stateOmega ArgKurman, MelissaCalculated using CO2calc
47Aragonite saturation state, standard deviationOmega Arg std dev±Kurman, MelissaCalculated using CO2calc
48Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
49Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
50Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
51Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
52Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
53Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
54Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
55Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
56Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
16836 data points

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