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Hornick, Thomas; Bach, Lennart Thomas; Crawfurd, Katharine J; Spilling, Kristian; Achterberg, Eric Pieter; Woodhouse, Jason N; Schulz, Kai Georg; Brussaard, Corina P D; Riebesell, Ulf; Grossart, Hans-Peter (2017): Seawater carbonate chemistry and size-fractionated bacterial protein production (BPP) of free-living and particle associated bacteria and abundance of particle associated heterotrophic prokaryotes of KOSMOS Finland 2012 mesocosm study [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.876211

Always quote citation above when using data! You can download the citation in several formats below.

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Keyword(s):
Baltic Sea; Coast and continental shelf; Entire community; Field experiment; Mesocosm or benthocosm; Other metabolic rates; Pelagos; Temperate
Related to:
Hornick, Thomas; Bach, Lennart Thomas; Crawfurd, Katharine J; Spilling, Kristian; Achterberg, Eric Pieter; Woodhouse, Jason N; Schulz, Kai Georg; Brussaard, Corina P D; Riebesell, Ulf; Grossart, Hans-Peter (2017): Ocean acidification impacts bacteria–phytoplankton coupling at low-nutrient conditions. Biogeosciences, 14(1), 1-15, https://doi.org/10.5194/bg-14-1-2017
Original version:
Hornick, Thomas; Bach, Lennart Thomas; Crawfurd, Katharine J; Spilling, Kristian; Achterberg, Eric Pieter; Woodhouse, Jason N; Schulz, Kai Georg; Brussaard, Corina P D; Riebesell, Ulf; Grossart, Hans-Peter (2016): KOSMOS Finland 2012 mesocosm study: Size-fractionated bacterial protein production (BPP) of free-living and particle associated bacteria and abundance of particle associated heterotrophic prokaryotes [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.868621
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Coverage:
Latitude: 59.858330 * Longitude: 23.258330
Date/Time Start: 2012-06-19T00:00:00 * Date/Time End: 2012-08-04T00:00:00
Event(s):
KOSMOS_2012_Tvaerminne * Latitude: 59.858330 * Longitude: 23.258330 * Date/Time: 2012-06-12T00:00:00 * Method/Device: Mesocosm experiment (MESO)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2017-06-12.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
DATE/TIMEDate/TimeGrossart, Hans-PeterGeocode
Day of experimentDOEdayGrossart, Hans-Peter
Mesocosm labelMeso labelGrossart, Hans-Peter
Protein production, particle associated bacteriaPA BPP-Cµg/l/dayGrossart, Hans-Petersize fraction >5.0 µm
Protein production, free-living bacteriaFL BPP-Cµg/l/dayGrossart, Hans-Petersize fraction 0.2-5.0 µm
Prokaryotes, heterotroph, particle associatedProk het PA#/mlGrossart, Hans-Peter
Temperature, waterTemp°CSchulz, Kai Georg
SalinitySalSchulz, Kai Georg
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmSchulz, Kai Georg
10 Carbon, inorganic, dissolvedDICµmol/kgSchulz, Kai Georg
11 pHpHSchulz, Kai Georgtotal scale
12 Aragonite saturation stateOmega ArgSchulz, Kai Georg
13 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
14 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
15 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
16 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
17 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
18 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
19 Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
20 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
21 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
2122 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Date/Time

DOE [day]

Meso label

PA BPP-C [µg/l/day]
(size fraction >5.0 µm)

FL BPP-C [µg/l/day]
(size fraction 0.2-5.0 µm)

Prok het PA [#/ml]

Temp [°C]

Sal

fCO2water_SST_wet [µatm]
10 
DIC [µmol/kg]
11 
pH
(total scale)
12 
Omega Arg
13 
CSC flag
14 
CO2 [µmol/kg]
15 
fCO2water_SST_wet [µatm]
16 
pCO2water_SST_wet [µatm]
17 
[HCO3]- [µmol/kg]
18 
[CO3]2- [µmol/kg]
19 
AT [µmol/kg]
20 
Omega Arg
21 
Omega Cal
2012-06-19T00:00:00-316.83.0720888.775.702341473.28.2511.184912.70234.40235.321400.9559.561529.770.911.66
2012-06-22T00:00:00014.93.0465607.985.702351470.58.2471.132913.08234.90235.831400.2657.161524.120.871.59
2012-06-24T00:00:00217.78.66492610.455.692741472.88.1901.113914.02274.05275.101403.4155.371523.310.861.56
2012-06-27T00:00:005120.529.114333711.805.693051474.38.1501.081914.89304.39305.541406.0853.341521.660.841.51
2012-06-30T00:00:00817.55.05825711.225.693101477.68.1411.037915.47310.36311.541410.8851.251521.720.801.45
2012-07-03T00:00:001112.63.61562711.755.693261479.38.1221.019915.98326.16327.391413.1650.161521.910.791.42
2012-07-06T00:00:001418.320.85699914.505.703591477.68.0891.069916.09358.83360.141409.9051.621521.480.831.48
2012-07-09T00:00:0017122.633.59891115.195.703911479.68.0551.024917.16391.11392.531413.3149.131519.790.791.42
2012-07-12T00:00:0020127.349.88382313.555.70
2012-07-15T00:00:0023125.652.33995513.805.704391491.58.0050.866920.12438.99440.611429.4041.981520.430.671.20
2012-07-18T00:00:0026118.826.74736011.325.70
2012-07-21T00:00:002914.98.5465609.275.713771492.18.0560.790920.07376.98378.451432.3739.661518.350.611.11
2012-07-23T00:00:003113.06.1423308.275.713661498.18.0670.779920.18366.10367.551438.6639.271524.080.601.09
2012-07-25T00:00:003315.110.2186888.295.713851498.88.0460.743921.19384.70386.221440.1337.481521.650.571.04
2012-07-27T00:00:003516.37.2998910.055.714121497.48.0220.761921.36411.95413.541438.0837.961520.540.591.07
2012-07-29T00:00:0037120.910.53786012.235.714521497.67.9890.780921.81452.25453.941437.4938.301520.630.601.09
2012-07-31T00:00:003912.11.72609913.125.704711497.57.9740.785922.09471.46473.211437.1338.281520.240.611.09
2012-08-02T00:00:0041114.017.72239410.975.714451499.37.9930.743922.34444.35446.051440.1036.871520.180.571.04
2012-08-04T00:00:0043118.717.12347012.085.714771501.17.9670.738923.09476.56478.361441.7036.301520.510.571.03
2012-06-19T00:00:00-3515.08.9494558.725.702511474.18.2221.107913.63251.16252.141404.7255.751525.360.861.55
2012-06-22T00:00:000513.318.5844208.175.702431472.78.2341.109913.44242.94243.901403.2556.021524.620.861.56
2012-06-24T00:00:002515.124.713549110.335.692831472.78.1771.075914.50282.35283.441404.6753.531520.610.831.50
2012-06-27T00:00:005514.226.011860911.825.693141475.88.1371.054915.36314.24315.421408.5551.901521.040.811.47
2012-06-30T00:00:00855.03.84777911.165.703071476.18.1461.042915.30306.22307.391409.1351.671520.920.811.46
2012-07-03T00:00:001159.217.73608811.725.693241479.98.1251.024915.88323.93325.151413.5550.461522.950.791.43
2012-07-06T00:00:001458.223.24652214.615.693581478.88.0901.078916.02358.62359.921410.8151.971523.120.831.49
2012-07-09T00:00:0017514.826.913202115.135.703971481.48.0491.007917.45396.99398.431415.5348.421520.470.781.40
2012-07-12T00:00:0020518.846.09974913.555.70
2012-07-15T00:00:0023511.526.95316513.845.704271489.38.0170.888919.52426.34427.911426.6443.141520.210.691.24
2012-07-18T00:00:0026512.520.66454411.335.70
2012-07-21T00:00:0029511.324.5652489.285.703851493.78.0480.777920.47384.59386.091434.2538.981518.760.601.09
2012-07-23T00:00:003158.917.1364638.235.713691495.98.0620.768920.41369.74371.201436.7938.711520.980.591.08
2012-07-25T00:00:003358.721.1423718.305.703911499.38.0390.732921.54391.25392.791440.8636.901521.110.561.03
2012-07-27T00:00:0035510.116.13061010.095.714221498.68.0120.747921.86422.11423.741439.5537.201520.360.581.04
2012-07-29T00:00:0037512.416.85171512.225.714641496.17.9780.758922.35463.47465.211436.4437.301517.460.591.06
2012-07-31T00:00:003959.315.74962113.075.704881496.97.9590.756922.89487.82489.641437.1036.911517.250.581.05
2012-08-02T00:00:0041510.212.44607710.925.714481499.17.9890.735922.57448.27449.981440.0736.461519.270.571.03
2012-08-04T00:00:0043511.513.24526412.065.714811499.77.9620.729923.35481.61483.421440.5235.831518.330.561.02
2012-06-19T00:00:00-378.75.6343678.695.702501472.78.2231.109913.60250.27251.261403.3555.761524.010.861.55
2012-06-22T00:00:00079.311.9670218.185.702391470.78.2411.126913.19238.63239.581400.6656.841523.830.871.58
2012-06-24T00:00:002711.820.215627410.305.703961494.18.0390.798920.35395.89397.421434.0039.741520.130.621.12
2012-06-27T00:00:005721.637.89513911.855.694831498.97.9600.717923.58483.00484.821439.9835.341516.660.551.00
2012-06-30T00:00:008710.621.06873511.115.694801501.47.9610.696924.02479.98481.811442.9034.481517.540.540.97
2012-07-03T00:00:001177.316.43931011.725.704641501.27.9770.743922.78464.48466.231441.8036.621521.290.571.04
2012-07-06T00:00:001479.520.37166814.605.705171499.37.9400.777923.08516.44518.321438.7037.521519.840.601.08
2012-07-09T00:00:0017715.622.16328615.095.705611502.97.9070.740924.68560.91562.941442.6835.531519.800.571.02
2012-07-12T00:00:0020718.135.77837413.535.70
2012-07-15T00:00:0023719.741.25558213.845.705651503.47.9000.687925.86565.02567.091444.1833.361516.610.530.96
2012-07-18T00:00:0026716.026.25993311.375.70
2012-07-21T00:00:002979.224.0360889.275.704761502.77.9590.638925.33475.69477.541445.3831.991514.770.490.89
2012-07-23T00:00:003178.723.2913678.215.714561502.67.9730.628925.22456.56458.371445.6831.701514.750.480.88
2012-07-25T00:00:003379.218.6402778.275.714661507.87.9660.621925.68465.84467.681450.7431.381519.010.480.87
2012-07-27T00:00:003572996610.155.714961502.27.9440.642925.61495.64497.551444.6031.991514.140.500.90
2012-07-29T00:00:0037712.217.13399412.235.715331505.17.9210.670925.66532.21534.211446.4832.961517.890.520.94
2012-07-31T00:00:003979.215.73576613.065.715541505.97.9070.674925.98553.50555.561446.9632.971518.550.520.94
2012-08-02T00:00:0041712.412.92448810.905.715051505.87.9400.659925.41504.38506.301447.6732.711518.780.510.92
2012-08-04T00:00:0043711.615.56328611.995.715391507.07.9150.656926.21539.34541.371448.5432.251518.590.510.91
2012-06-19T00:00:00-366.713.9259858.725.692181472.48.2821.264911.81217.58218.431396.9663.631534.530.981.77
2012-06-22T00:00:000613.812.4831318.175.702401470.08.2391.120913.25239.64240.581400.2056.541522.720.861.57
2012-06-24T00:00:002614.425.68425910.345.696931522.87.8050.476935.58692.87695.541463.5323.691514.910.370.67
2012-06-27T00:00:005615.716.813034411.825.699891538.87.6580.366948.37989.73993.471472.4218.001511.570.280.51
2012-06-30T00:00:008610.421.95783811.165.699011535.37.6960.387945.02901.19904.621471.1519.131512.580.300.54
2012-07-03T00:00:001165.512.66138211.725.698811533.37.7070.407943.25881.97885.311470.0120.041513.600.310.57
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2012-07-09T00:00:0017611.521.510310215.125.699991534.37.6640.431943.981000.251003.871469.6220.701514.610.330.60
2012-07-12T00:00:0020615.630.812405813.515.69
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2012-07-23T00:00:003167.218.4888528.235.706361525.77.8350.465935.15636.86639.381467.1223.431518.150.360.65
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2012-07-09T00:00:0017311.321.48969015.155.7012301548.27.5770.355953.961228.461232.911477.1817.061514.220.270.49
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2012-07-25T00:00:003334.914.8207838.285.717461535.27.7680.401941.14746.68749.631473.8420.221517.880.310.56
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2012-06-19T00:00:00-384.23.1511328.695.702201473.18.2771.250911.96220.20221.071398.2362.911534.260.971.75
2012-06-22T00:00:000813.617.1952148.205.702391470.98.2401.124913.22239.26240.211400.9156.771523.910.871.58
2012-06-24T00:00:002815.423.59859810.315.6911341552.17.5960.297958.221132.761137.131479.1014.781511.150.230.42
2012-06-27T00:00:005822.438.415716811.825.6916201577.77.4480.228979.241621.321627.451487.2411.211511.530.180.32
2012-06-30T00:00:008810.518.65951411.125.6914361572.87.4990.248971.781434.951440.421488.7412.281515.320.190.35
2012-07-03T00:00:001188.518.62481111.725.6914501570.67.4960.253971.121450.271455.761487.0112.471514.160.200.35
2012-07-06T00:00:0014813.118.75155114.535.6913401552.07.5370.315960.031340.311345.211476.7915.181509.620.240.44
2012-07-09T00:00:0017812.715.69974915.095.7015751565.87.4710.278969.251573.661579.371483.1613.391512.270.210.39
2012-07-12T00:00:002087.313.210226413.535.70
2012-07-15T00:00:0023816.329.14865413.845.7011581548.27.5990.351952.941156.561160.821478.1817.071515.300.270.49
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2012-07-21T00:00:002989.024.3515549.265.709611542.97.6620.329951.24961.95965.711475.1916.471510.930.250.46
2012-07-23T00:00:003189.520.2574198.225.708951546.87.6910.336949.43895.21898.751480.4116.961517.420.260.47
2012-07-25T00:00:003387.416.1426938.275.708461538.77.7140.354946.62845.84849.191474.2317.841513.120.270.50
2012-07-27T00:00:003586.612.53914910.125.718501537.57.7180.389944.01850.83854.111474.1119.381516.280.300.54
2012-07-29T00:00:003787.610.93173812.205.718971534.17.7010.411943.33897.76901.131470.6020.171514.440.320.57
2012-07-31T00:00:003988.512.65091013.065.709351533.07.6860.412943.88934.90938.371469.0120.111512.760.320.57
2012-08-02T00:00:004188.88.22593810.915.718771535.27.7070.392944.16876.81880.161471.5819.451513.940.300.55
2012-08-04T00:00:004387.911.94316912.045.708741532.67.7120.418942.40873.78877.071469.6720.531514.330.320.58