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Data Publisher for Earth & Environmental Science

Bienhold, Christina; Pop Ristova, Petra; Wenzhöfer, Frank; Dittmar, Thorsten; Boetius, Antje (2017): Bacterial sequence information wood colonization experiment during RV Meteor cruise M70/2 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.874420, In supplement to: Bienhold, C et al. (2013): How deep-sea wood falls sustain chemosynthetic life. PLoS ONE, 8(1), e53590, https://doi.org/10.1371/journal.pone.0053590

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Project(s):
Hotspot Ecosystem Research and Mans Impact On European Seas (HERMIONE)
Hotspot Ecosystem Research on the Margins of European Seas (HERMES)
Monitoring colonisation processes in chemosynthetic ecosystems (CHEMECO)
Funding:
Seventh Framework Programme (FP7), grant/award no. 226354: Hotspot Ecosystem Research and Mans Impact On European Seas
Sixth Framework Programme (FP6), grant/award no. 511234: Hotspot Ecosystem Research on the Margins of European Seas
Coverage:
Median Latitude: 32.534103 * Median Longitude: 30.353937 * South-bound Latitude: 32.532707 * West-bound Longitude: 30.352060 * North-bound Latitude: 32.534690 * East-bound Longitude: 30.356408
Date/Time Start: 2007-11-11T02:05:07 * Date/Time End: 2007-11-13T06:15:51
Minimum DEPTH, sediment/rock: 0.01 m * Maximum DEPTH, sediment/rock: 0.03 m
Event(s):
MEDECO2-D338-PANIER-1  * Latitude: 32.534163 * Longitude: 30.352082 * Date/Time: 2007-11-11T05:56:52 * Elevation: -1697.0 m * Location: Nile Fan Pockmark Area * Campaign: MEDECO2 * Basis: Pourquoi Pas ? (2005) * Method/Device: ROV drawer (PAN) * Comment: taking wood pieces at ref wood
MEDECO2-D338-PC-6  * Latitude: 32.534285 * Longitude: 30.352060 * Date/Time: 2007-11-11T06:45:05 * Elevation: -1697.0 m * Location: Nile Fan Pockmark Area * Campaign: MEDECO2 * Basis: Pourquoi Pas ? (2005) * Method/Device: Push corer (PUC) * Comment: PC 6 - at CHAM
MEDECO2-D338-PC-7  * Latitude: 32.534160 * Longitude: 30.352080 * Date/Time: 2007-11-11T05:27:56 * Elevation: -1696.0 m * Location: Nile Fan Pockmark Area * Campaign: MEDECO2 * Basis: Pourquoi Pas ? (2005) * Method/Device: Push corer (PUC) * Comment: 0.5 m away from wood #1
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1 Event labelEventBienhold, Christina
2 Latitude of eventLatitudeBienhold, Christina
3 Longitude of eventLongitudeBienhold, Christina
4 Elevation of eventElevationmBienhold, Christina
5 DEPTH, sediment/rockDepth sedmBienhold, ChristinaGeocode
6 Depth, top/minDepth topmBienhold, Christina
7 Depth, bottom/maxDepth botmBienhold, Christina
8 File nameFile nameBienhold, Christinain.sff
9 Sample materialSamp matBienhold, Christina
10 ExperimentExpBienhold, Christina
11 Experimental treatmentExp treatBienhold, Christina
12 Domain, biologyDomainBienhold, Christina
13 Region, geneticRegionBienhold, Christina
14 InstrumentInstrumentBienhold, Christina
15 LaboratoryLabBienhold, ChristinaSequencing Center
16 CommentCommentBienhold, Christina
17 Method commentMethod commBienhold, ChristinaNA Extraction method
18 PrimersPrimersBienhold, Christinaforward and reverse primers
19 DateDateBienhold, Christina
20 Accession number, geneticsAccess no genBienhold, Christina
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Size:
120 data points

Data

Download dataset as tab-delimited text — use the following character encoding:

1 
Event		2 
Latitude		3 
Longitude		4 
Elevation [m]		5 
Depth sed [m]		6 
Depth top [m]		7 
Depth bot [m]		8 
File name		9 
Samp mat		10 
Exp		11 
Exp treat		12 
Domain		13 
Region		14 
Instrument		15 
Lab		16 
Comment		17 
Method comm		18 
Primers		19 
Date		20 
Access no gen
MEDECO2-D338-PANIER-1 32.534230.3521-16970.030.020.04DSS_0029_2007_11_12.sffwoodwood colonization experimentin situBacteriav6454 GS FLXMarine Biological Laboratory, Woods HoleDNAMoBio UltraClean Soil DNA Isolation KitCTAACCGANGAACCTYACC _CNACGCGAAGAACCTTANC _CAACGCGMARAACCTTACC ATACGCGARGAACCTTACC and CGACAGCCATGCANCACCT _CGACAACCATGCANCACCT _CGACGGCCATGCANCACCT _CGACGACCATGCANCACCT2008-11insdc:SRS265887
MEDECO2-D338-PC-6 32.534330.3521-16970.010.000.02DSS_0026_2007_11_12.sffsedimentwood colonization experimentin situBacteriav6454 GS FLXMarine Biological Laboratory, Woods HoleDNAMoBio UltraClean Soil DNA Isolation KitCTAACCGANGAACCTYACC _CNACGCGAAGAACCTTANC _CAACGCGMARAACCTTACC ATACGCGARGAACCTTACC and CGACAGCCATGCANCACCT _CGACAACCATGCANCACCT _CGACGGCCATGCANCACCT _CGACGACCATGCANCACCT2008-11insdc:SRS265884
MEDECO2-D338-PC-7 32.534230.3521-16960.010.000.02DSS_0025_2007_11_12.sffsedimentwood colonization experimentin situBacteriav6454 GS FLXMarine Biological Laboratory, Woods HoleDNAMoBio UltraClean Soil DNA Isolation KitCTAACCGANGAACCTYACC _CNACGCGAAGAACCTTANC _CAACGCGMARAACCTTACC ATACGCGARGAACCTTACC and CGACAGCCATGCANCACCT _CGACAACCATGCANCACCT _CGACGGCCATGCANCACCT _CGACGACCATGCANCACCT2008-11insdc:SRS265883
MEDECO2-D339-BOX 32.534630.3564-16940.030.020.04DSS_0031_2007_11_13.sffwoodwood colonization experimentin situBacteriav6454 GS FLXMarine Biological Laboratory, Woods HoleDNAMoBio UltraClean Soil DNA Isolation KitCTAACCGANGAACCTYACC _CNACGCGAAGAACCTTANC _CAACGCGMARAACCTTACC ATACGCGARGAACCTTACC and CGACAGCCATGCANCACCT _CGACAACCATGCANCACCT _CGACGGCCATGCANCACCT _CGACGACCATGCANCACCT2008-11insdc:SRS265889
MEDECO2-D338-Wood2-1 32.532730.3529-16930.030.020.04DSS_0030_2007_11_12.sffwoodwood colonization experimentin situBacteriav6454 GS FLXMarine Biological Laboratory, Woods HoleDNAMoBio UltraClean Soil DNA Isolation KitCTAACCGANGAACCTYACC _CNACGCGAAGAACCTTANC _CAACGCGMARAACCTTACC ATACGCGARGAACCTTACC and CGACAGCCATGCANCACCT _CGACAACCATGCANCACCT _CGACGGCCATGCANCACCT _CGACGACCATGCANCACCT2008-11insdc:SRS265888
MEDECO2-D338-WOOD6-1 32.533530.353216930.030.020.04DSS_0032_2007_11_12.sffwoodwood colonization experimentin situBacteriav6454 GS FLXMarine Biological Laboratory, Woods HoleDNAMoBio UltraClean Soil DNA Isolation KitCTAACCGANGAACCTYACC _CNACGCGAAGAACCTTANC _CAACGCGMARAACCTTACC ATACGCGARGAACCTTACC and CGACAGCCATGCANCACCT _CGACAACCATGCANCACCT _CGACGGCCATGCANCACCT _CGACGACCATGCANCACCT2008-11insdc:SRS265890
MEDECO2-D339-PC-10 32.534730.3564-16940.010.000.02DSS_0028_2007_11_13.sffsedimentwood colonization experimentin situBacteriav6454 GS FLXMarine Biological Laboratory, Woods HoleDNAMoBio UltraClean Soil DNA Isolation KitCTAACCGANGAACCTYACC _CNACGCGAAGAACCTTANC _CAACGCGMARAACCTTACC ATACGCGARGAACCTTACC and CGACAGCCATGCANCACCT _CGACAACCATGCANCACCT _CGACGGCCATGCANCACCT _CGACGACCATGCANCACCT2008-11insdc:SRS265886
MEDECO2-D339-PC-16 32.534630.3564-16940.010.000.02DSS_0027_2007_11_13.sffsedimentwood colonization experimentin situBacteriav6454 GS FLXMarine Biological Laboratory, Woods HoleDNAMoBio UltraClean Soil DNA Isolation KitCTAACCGANGAACCTYACC _CNACGCGAAGAACCTTANC _CAACGCGMARAACCTTACC ATACGCGARGAACCTTACC and CGACAGCCATGCANCACCT _CGACAACCATGCANCACCT _CGACGGCCATGCANCACCT _CGACGACCATGCANCACCT2008-11insdc:SRS265885