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Fink, Artur (2017): Measurements of microbial processes, dissolution, water and porewater chemistry during experiments on two coral reef sediments: Magnetic Island profiles. PANGAEA, https://doi.org/10.1594/PANGAEA.873830, In supplement to: Fink, Artur; den Haan, Jost; Chennu, Arjun; Uthicke, Sven; de Beer, Dirk (2017): Ocean Acidification Changes Abiotic Processes but Not Biotic Processes in Coral Reef Sediments. Frontiers in Marine Science, 4, https://doi.org/10.3389/fmars.2017.00073

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Keyword(s):
Benthos; Bottles or small containers/Aquaria ( 20 L); Coast and continental shelf; Entire community; Laboratory experiment; Soft-bottom community; Tropical
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloise; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Coverage:
Date/Time Start: 2014-01-01T00:00:00 * Date/Time End: 2014-01-01T00:00:00
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2017-03-22.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethodComment
1DATE/TIMEDate/TimeFink, ArturGeocode
2OriginOriginFink, Artursediment
3TreatmentTreatFink, Artur
4pHpHFink, Arturtotal scale
5TreatmentTreatFink, Arturlight/dark
6IdentificationIDFink, Arturflume
7Depth, nominalDepth, nominalFink, Arturdepth in mm
8Oxygen saturationO2 sat%Fink, Artur
9pHpHFink, Arturtotal scale
10pH, standard errorpH std e±Fink, Arturtotal scale
11Alkalinity, totalATµmol/kgFink, Artur
12Standard errorStd e±Fink, Artur
13Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmFink, Artur
14Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Fink, Artur
15Carbon, inorganic, dissolvedDICµmol/lFink, Artur
16Carbon, inorganic, dissolved, standard deviationDIC std dev±Fink, Artur
17Calcite saturation stateOmega CalFink, Artur
18Standard errorStd e±Fink, Artur
19Aragonite saturation stateOmega ArgFink, Artur
20Standard errorStd e±Fink, Artur
21Saturation indexSIFink, ArturOmega HMC
22Standard errorStd e±Fink, Artur
23Temperature, waterTemp°CFink, Artur
24Standard errorStd e±Fink, Artur
25SalinitySalFink, Artur
26Standard errorStd e±Fink, Artur
27Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
34Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Size:
43395 data points

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