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Fink, Artur (2017): Measurements of microbial processes, dissolution, water and porewater chemistry during experiments on two coral reef sediments: Percolation. PANGAEA, https://doi.org/10.1594/PANGAEA.873825, In supplement to: Fink, Artur; den Haan, Jost; Chennu, Arjun; Uthicke, Sven; de Beer, Dirk (2017): Ocean Acidification Changes Abiotic Processes but Not Biotic Processes in Coral Reef Sediments. Frontiers in Marine Science, 4, https://doi.org/10.3389/fmars.2017.00073

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Keyword(s):
Benthos; Bottles or small containers/Aquaria ( 20 L); Coast and continental shelf; Entire community; Laboratory experiment; Soft-bottom community; Tropical
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloise; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Coverage:
Date/Time Start: 2015-01-01T00:00:00 * Date/Time End: 2015-01-01T00:00:00
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2017-03-22.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethodComment
1DATE/TIMEDate/TimeFink, ArturGeocode
2OriginOriginFink, Artursediment
3TreatmentTreatFink, Artur
4pHpHFink, Arturtotal scale
5Time in secondsTimesFink, Artur
6OxygenO2µmol/lFink, Arturporewater oxygen concentration recalculated from mmol/l at 1 cm depth
7pHpHFink, Arturtotal scale
8pH, standard errorpH std e±Fink, Arturtotal scale
9Alkalinity, totalATµmol/kgFink, Artur
10Standard errorStd e±Fink, Artur
11Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmFink, Artur
12Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Fink, Artur
13Carbon, inorganic, dissolvedDICµmol/lFink, Artur
14Carbon, inorganic, dissolved, standard deviationDIC std dev±Fink, Artur
15Calcite saturation stateOmega CalFink, Artur
16Standard errorStd e±Fink, Artur
17Aragonite saturation stateOmega ArgFink, Artur
18Standard errorStd e±Fink, Artur
19High magnesium calcite saturation stateOmega HMCFink, Artur
20Standard errorStd e±Fink, Artur
21Temperature, waterTemp°CFink, Artur
22Standard errorStd e±Fink, Artur
23SalinitySalFink, Artur
24Standard errorStd e±Fink, Artur
25Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
26Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
27Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Size:
624896 data points

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