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García-Gómez, Candela; Mata, M T; Van Breusegem, Frank; Segovia, María (2016): Low-steady-state metabolism induced by elevated CO2 increases resilience to UV radiation in the unicellular green-algae Dunaliella tertiolecta [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.873652, Supplement to: García-Gómez, C et al. (2016): Low-steady-state metabolism induced by elevated CO2 increases resilience to UV radiation in the unicellular green-algae Dunaliella tertiolecta. Environmental and Experimental Botany, 132, 163-174, https://doi.org/10.1016/j.envexpbot.2016.09.001

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Abstract:
Global change factors derived from anthropogenic activities such as increased CO2 and ultraviolet radiation (UVR) have direct impacts on the physiological responses of organisms in both terrestrial and aquatic ecosystems. We assessed in this work the mechanistic, physiological and molecular response of the unicellular chlorophyte Dunaliella tertiolecta exposed to combinatorial present (390 ppmv, LC) and future CO2 levels predicted for the year 2100 (900 ppmv, HC) and different UVR doses. Growth rates, cell esterase activity, reactive oxygen species accumulation (ROS), and 14C fixation decreased under HC compared to LC. The deleterious effects of UVR were attenuated in HC, except for decreased photosynthetic capacities. Transcriptome analysis showed different expression patterns depending on UVR and CO2 levels. PsbA, LhcII and eCA gene expression was downregulated at HC compared to LC. However, photolyase (PL) gene expression was upregulated at HC with respect LC in UVR. This suggests that HC (as opposed to LC) promoted a "low-metabolic steady state", decreasing UVR exposure-activated repair by means of protein replacement. Only PL photoreactivation was active under HC. Our data add evidence on D. tertiolecta possibly becoming more resilient to UVR exposure under future CO2 regimes, and maybe other marine unicellular chlorophytes, warranting serious considerations on the consequent ecological implications.
Keyword(s):
Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (<20 L); Chlorophyta; Dunaliella tertiolecta; Gene expression (incl. proteomics); Laboratory experiment; Laboratory strains; Light; Not applicable; Pelagos; Phytoplankton; Plantae; Primary production/Photosynthesis; Single species
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2017-03-16.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TypeTypeGarcía-Gómez, Candelastudy
SpeciesSpeciesGarcía-Gómez, Candela
Registration number of speciesReg spec noGarcía-Gómez, Candela
Uniform resource locator/link to referenceURL refGarcía-Gómez, CandelaWoRMS Aphia ID
IdentificationIDGarcía-Gómez, CandelaCylinder
TreatmentTreatGarcía-Gómez, Candela
Time in daysTimedaysGarcía-Gómez, Candela
PercentagePerc%García-Gómez, CandelaDead Cells
Cell densityCells#/mlGarcía-Gómez, Candela
10 Maximum photochemical quantum yield of photosystem IIFv/FmGarcía-Gómez, Candela
11 FluorescenceFluorescencearbitrary unitsGarcía-Gómez, CandelaCell esterase activity based on FDA green fluorescence emission
12 Reactive oxygen species productionROS prodGarcía-Gómez, Candela
13 Gross carbon fixation rate per cellG C fix/cellfmol/#/dayGarcía-Gómez, Candela
14 Gene expressionGene expressionGarcía-Gómez, CandelaPsbA
15 Gene expressionGene expressionGarcía-Gómez, CandelaLHCII
16 Gene expressionGene expressionGarcía-Gómez, CandelaDCA
17 Gene expressionGene expressionGarcía-Gómez, CandelaCPD photolyase
18 SalinitySalGarcía-Gómez, Candela
19 Temperature, waterTemp°CGarcía-Gómez, Candela
20 Initial slope of the photosynthesis-irradiance curvealpha(mg C/mg Chl a/h)/(W/m2)García-Gómez, Candela
21 Initial slope of rapid light curve, standard deviationalpha std dev±García-Gómez, Candela
22 Maximal electron transport rate, relativerETR maxGarcía-Gómez, Candela
23 Maximal electron transport rate, relative, standard deviationrETR max std dev±García-Gómez, Candela
24 Light saturationEkµmol/m2/sGarcía-Gómez, Candela
25 Light saturation, standard deviationEk std dev±García-Gómez, Candela
26 pHpHGarcía-Gómez, CandelaNBS scale
27 pH, standard deviationpH std dev±García-Gómez, CandelaNBS scale
28 Carbon, inorganic, dissolvedDICµmol/lGarcía-Gómez, Candela
29 Carbon, inorganic, dissolved, standard deviationDIC std dev±García-Gómez, Candela
30 Alkalinity, totalATµmol/lGarcía-Gómez, Candela
31 Alkalinity, total, standard deviationAT std dev±García-Gómez, Candela
32 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
34 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
38 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40 Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
1870 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Type
(study)

Species

Reg spec no

URL ref
(WoRMS Aphia ID)

ID
(Cylinder)

Treat

Time [days]

Perc [%]
(Dead Cells)

Cells [#/ml]
10 
Fv/Fm
11 
Fluorescence [arbitrary units]
(Cell esterase activity based ...)
12 
ROS prod
13 
G C fix/cell [fmol/#/day]
14 
Gene expression
(PsbA)
15 
Gene expression
(LHCII)
16 
Gene expression
(DCA)
17 
Gene expression
(CPD photolyase)
18 
Sal
19 
Temp [°C]
20 
alpha [(mg C/mg Chl a/h)/(W/m2)]
21 
alpha std dev [±]
22 
rETR max
23 
rETR max std dev [±]
24 
Ek [µmol/m2/s]
25 
Ek std dev [±]
26 
pH
(NBS scale)
27 
pH std dev [±]
(NBS scale)
28 
DIC [µmol/l]
29 
DIC std dev [±]
30 
AT [µmol/l]
31 
AT std dev [±]
32 
CSC flag
33 
pH
(total scale)
34 
CO2 [µmol/kg]
35 
fCO2water_SST_wet [µatm]
36 
pCO2water_SST_wet [µatm]
37 
[HCO3]- [µmol/kg]
38 
[CO3]2- [µmol/kg]
39 
DIC [µmol/kg]
40 
AT [µmol/kg]
41 
Omega Arg
42 
Omega Cal
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laboratoryDunaliella tertiolecta (phytoplankton)178590marinespecies.orgHC-PAB735161.510.47153.4037.66103.1410.267.730.041752.8380.461850.0070.71267.7325.68706.55709.081626.8067.691720.171803.561.041.61
laboratoryDunaliella tertiolecta (phytoplankton)178590marinespecies.orgLC-P735161.470.36249.8159.37184.4778.568.380.07471.9018.28705.0049.50268.381.4138.8438.97398.9974.08474.48687.301.141.77
laboratoryDunaliella tertiolecta (phytoplankton)178590marinespecies.orgLC-PAB735162.470.82192.8643.5281.0116.378.550.09440.4059.73740.0028.28268.550.8322.9623.04348.9295.83445.58721.431.472.29