Langeveld, Bram W; Mol, Dick; Zazula, Grant D; Gravendeel, Barbara; Eurlings, Marcel; Groenenberg, Dick; van Reenen, Guido B A; van Geel, Bas (2017): Supplementary aDNA sequences from a Pleistocene ground squirrel midden, Yukon [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.873537, Supplement to: Langeveld, Bram W; Mol, Dick; Zazula, Grant D; Gravendeel, Barbara; Eurlings, Marcel; McMichael, Crystal N H; Groenenberg, Dick; van Reenen, Guido B A; Palmeira, Mona; Vogel, Johnny; van Geel, Bas (2018): A multidisciplinary study of a Late Pleistocene arctic ground squirrel (Urocitellus parryii) midden from Yukon, Canada. Quaternary Research, 89(1), 333-351, https://doi.org/10.1017/qua.2017.93
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Abstract:
Data consists of sequence data of plants and fungi from a Pleistocene ground squirrel midden (collected from a small placer goldmine on Little Blanche Creek, Klondike area near Dawson City, Yukon Territory, Canada; coordinates: 63°50'35"N 139°05'41"W). Three subsamples from this midden were sequenced with various primers, which yielded genetic products of various sizes. This resulted in six different tables, explained below. From the midden itself other subsamples were studied for macro- and microfossils of plants and fungi.
Coverage:
Latitude: 63.843100 * Longitude: -139.094700
Event(s):
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Description | Description | Langeveld, Bram W | |||
| 2 | Sample type | Samp type | Langeveld, Bram W | |||
| 3 | File name | File name | Langeveld, Bram W | |||
| 4 | File type | File type | Langeveld, Bram W | |||
| 5 | File size | File size | kByte | Langeveld, Bram W | ||
| 6 | Uniform resource locator/link to raw data file | URL raw | Langeveld, Bram W |
License:
Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported (CC-BY-NC-ND-3.0)
Size:
36 data points
Data
| 1 Description | 2 Samp type | 3 File name | 4 File type | 5 File size [kByte] | 6 URL raw |
|---|---|---|---|---|---|
| Ancient DNA sequence data (large fragments) from subsample A1 from the vegetation recovered from the arctic ground squirrel midden | plants and fungi | STable_1_Arctic_Ground_Squirrel_A1_IonXpress_001_Large_Frags | fastq | 40353 | STable_1_Arctic_Ground_Squirrel_A1_IonXpress_001_Large_Frags.fastq |
| Ancient DNA sequence data (small fragments) from subsample A1 from the vegetation recovered from the arctic ground squirrel midden | plants and fungi | STable_2_Arctic_Ground_Squirrel_A1_IonXpress_001_Small_Frags | fastq | 34588 | STable_2_Arctic_Ground_Squirrel_A1_IonXpress_001_Small_Frags.fastq |
| Ancient DNA sequence data (large fragments) from subsample A2 from the vegetation recovered from the arctic ground squirrel midden | plants and fungi | STable_3_Arctic_Ground_Squirrel_A2_IonXpress_002_Large_Frags | fastq | 66759 | STable_3_Arctic_Ground_Squirrel_A2_IonXpress_002_Large_Frags.fastq |
| Ancient DNA sequence data (small fragments) from subsample A2 from the vegetation recovered from the arctic ground squirrel midden | plants and fungi | STable_4_Arctic_Ground_Squirrel_A2_IonXpress_002_Small_Frags | fastq | 40413 | STable_4_Arctic_Ground_Squirrel_A2_IonXpress_002_Small_Frags.fastq |
| Ancient DNA sequence data (large fragments) from subsample A3 from the vegetation recovered from the arctic ground squirrel midden | plants and fungi | STable_5_Arctic_Ground_Squirrel_A3_IonXpress_003_Large_Frags | fastq | 16252 | STable_5_Arctic_Ground_Squirrel_A3_IonXpress_003_Large_Frags.fastq |
| Ancient DNA sequence data (small fragments) from subsample A3 from the vegetation recovered from the arctic ground squirrel midden | plants and fungi | STable_6_Arctic_Ground_Squirrel_A3_IonXpress_003_Small_Frags | fastq | 6450 | STable_6_Arctic_Ground_Squirrel_A3_IonXpress_003_Small_Frags.fastq |