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Roth, Olivia (2017): Gene expression via Fluidigm chip system on Western Baltic spring-spawning herring (Clupea harengus) [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.873387, In supplement to: Poirier, Maude; Listmann, Luisa; Roth, Olivia (2017): Selection by higher-order effects of salinity and bacteria on early life-stages of Western Baltic spring-spawning herring. Evolutionary Applications, 10(6), 603-615, https://doi.org/10.1111/eva.12477

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Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1SpeciesSpeciesRoth, Olivia
2Sample code/labelSample labelRoth, Oliviafluidigm chip run (gene expression)
3IdentificationIDRoth, Olivia
4OriginOriginRoth, Oliviamaternal; Kf: Kiel female; Df: Danish female
5OriginOriginRoth, Oliviapaternal; Km: Kiel male; Dm: Danish male
6ReplicateReplRoth, Olivia
7TreatmentTreatRoth, Oliviasalinity
8TreatmentTreatRoth, Oliviavibrio infection
9Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, Olivia18S ribosomal RNA
10Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaDNA(cytosine-5)-methyltransferase3A (ADDZdoamin)
11Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaAkirin
12Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaApolipoprotein E
13Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaNa+-K+-ATPase
14Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaBeta-actin
15Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaHistone-acetyltransferase KAT2A (Bromodomain)
16Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaComplement component 1 Q subcomponent-binding
17Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaComplement component C3
18Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaElongation Factor 1 alpha
19Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaGrowth arrest and DNA damage inducible protein 45 alpha
20Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaGene associated with retinoic-interferon-induced mortality 19
21Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaHistone-deacetylase 1B (HDAC1domain)
22Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaHeat shock factor 1
23Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaHeat shock protein 70
24Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaHeat shock protein 90
25Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaHeat shock protein Dnaj4
26Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaIK cytokine
27Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaIntegrin beta 1
28Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaKinesin Family mem. 13b
29Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaHistone-acetyltransferase KAT8(MOZ/SASdomain)
30Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaNa+/HCO3- cotransporter
31Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaNa+/H+ exchanger 1
32Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaNatural killer enhancing factor
33Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaNatural resistance associated macrophage
34Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaHistone-acetyltransferase KAT2A (PCAFdomain)
35Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaTumor necrosis factor 2
36Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaLysine-specific demethylase_6A (TPRdomain)
37Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaTranslocator protein
38Threshold cycle, quantitative polymerase chain reactionCt qPCRRoth, OliviaV-type-H+-ATPase subunit A
License:
Creative Commons Attribution 3.0 Unported (CC-BY-3.0)
Size:
3116 data points

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