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Robbins, Lisa L; Knorr, Paul O; Wynn, Jonathan G; Hallock, Pamela; Harries, P J (2017): Interpreting the role of pH on stable isotopes in large benthic foraminifera [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.869319, Supplement to: Robbins, LL et al. (2016): Interpreting the role of pH on stable isotopes in large benthic foraminifera. ICES Journal of Marine Science, fsw056, https://doi.org/10.1093/icesjms/fsw056

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Abstract:
Large benthic foraminifera (LBF) are prolific producers of calcium carbonate sediments in shallow, tropical environments that are being influenced by ocean acidification (OA). Two LBF species, Amphistegina gibbosa (Order Rotaliida) with low-Mg calcite tests and Archaias angulatus (Order Miliolida) with high-Mg calcite tests, were studied to assess the effects of pH 7.6 on oxygen and carbon isotopic fractionation between test calcite and ambient seawater. The delta 18O and delta 13C values of terminal chambers and of whole adult tests of both species after 6 weeks were not significantly different between pH treatments of 8.0 and 7.6. However, tests of juveniles produced during the 6-week treatments showed significant differences between delta 18O and delta 13C values from control (pH 8.0) when compared with the treatment (pH 7.6) for both species. Although each individual's growth was photographed and measured, difficulty in distinguishing and manually extracting newly precipitated calcite from adult specimens likely confounded any differences in isotopic signals. However, juvenile specimens that resulted from asexual reproduction that occurred during the experiments did not contain old carbonate that could confound the new isotopic signals. These data reveal a potential bias in the design of OA experiments if only adults are used to investigate changes in test chemistries. Furthermore, the results reaffirm that different calcification mechanisms in these two foraminiferal orders control the fractionation of stable isotopes in the tests and will reflect decreasing pH in seawater somewhat differently.
Keyword(s):
Amphistegina gibbosa; Archaias angulatus; Benthos; Chromista; Coast and continental shelf; Foraminifera; Heterotrophic prokaryotes; Laboratory experiment; North Atlantic; Other studied parameter or process; Single species; Temperate
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James C; Gentili, Bernard; Proye, Aurélien; Soetaert, Karline; Rae, James (2016): seacarb: seawater carbonate chemistry with R. R package version 3.1. https://cran.r-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2016-12-12.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1TypeTypeRobbins, Lisa Lstudy
2SpeciesSpeciesRobbins, Lisa L
3Registration number of speciesReg spec noRobbins, Lisa L
4Uniform resource locator/link to referenceURL refRobbins, Lisa LWoRMS Aphia ID
5TreatmentTreatRobbins, Lisa L
6Sample typeSamp typeRobbins, Lisa L
7ReplicatesRepl#Robbins, Lisa Ldelta 18O
8δ18Oδ18ORobbins, Lisa L
9δ18O, standard deviationδ18O std dev±Robbins, Lisa L
10ReplicatesRepl#Robbins, Lisa Ldelta 13C
11δ13Cδ13C‰ PDBRobbins, Lisa L
12δ13C, standard deviationδ13C std dev±Robbins, Lisa L
13ReplicatesRepl#Robbins, Lisa LpH, total alkalinity
14pHpHRobbins, Lisa LSpectrophotometrictotal scale
15pH, standard deviationpH std dev±Robbins, Lisa LSpectrophotometrictotal scale
16Carbon, inorganic, dissolvedDICµmol/kgRobbins, Lisa LCalculated using CO2calc
17Alkalinity, totalATµmol/kgRobbins, Lisa LPotentiometric titration
18Alkalinity, total, standard deviationAT std dev±Robbins, Lisa LPotentiometric titration
19Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmRobbins, Lisa LCalculated using CO2calc
20Calcite saturation stateOmega CalRobbins, Lisa LCalculated using CO2calc
21Temperature, waterTemp°CRobbins, Lisa L
22Temperature, water, standard deviationTemp std dev±Robbins, Lisa L
23SalinitySalRobbins, Lisa L
24Salinity, standard deviationSal std dev±Robbins, Lisa L
25Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
26Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
27Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
28Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
29Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
30Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
31Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
32Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
396 data points

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