Citation:

PANGAEA.861737

Name: Can trans-generational experiments be used to enhance species resilience to ocean warming and acidification?
Published: 2016-06-16
License: https://creativecommons.org/licenses/by/3.0/
Keywords: Animalia; Annelida; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Growth/Morphology; Laboratory experiment; Mediterranean Sea; Mortality/Survival; Ophryotrocha labronica; Other metabolic rates; Reproduction; Single species; Temperate; Temperature

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Keyword(s):

Animalia; Annelida; Benthic animals; Benthos; Bottles or small containers/Aquaria (<20 L); Coast and continental shelf; Growth/Morphology; Laboratory experiment; Mediterranean Sea; Mortality/Survival; Ophryotrocha labronica; Other metabolic rates; Reproduction; Single species; Temperate; Temperature

Related to:

Can trans-generational experiments be used to enhance species resilience to ocean warming and acidification? (2016). Evolutionary Applications, https://doi.org/10.1111/eva.12391

Original version:

Chakravarti, Leela Jackie; Jarrold, Michael; Gibbin, Emma M; Christen, Felix; Massamba-N'siala, Gloria; Blier, Pierre U; Calosi, Piero (2016): The effects of trans-generational exposure to ocean warming and acidification on life history and physiological traits in a marine polychaete. PANGAEA, https://doi.org/10.1594/PANGAEA.860477

Further details:

Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse (2015): seacarb: seawater carbonate chemistry with R. R package version 3.0.8. https://cran.r-project.org/package=seacarb

Project(s):

Ocean Acidification International Coordination Centre (OA-ICC)

Coverage:

Latitude: 37.284440 * Longitude: 13.517500

Event(s):

Porto_Empedocle_Harbour * Latitude: 37.284440 * Longitude: 13.517500 * Location: Italy

Comment:

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2016-06-15.

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Type	Type		Chakravarti, Leela Jackie		study
2	Species	Species		Chakravarti, Leela Jackie
3	Registration number of species	Reg spec no		Chakravarti, Leela Jackie
4	Uniform resource locator/link to reference	URL ref		Chakravarti, Leela Jackie		WoRMS Aphia ID
5	Treatment	Treat		Chakravarti, Leela Jackie
6	Growth rate	µ	#/day	Chakravarti, Leela Jackie		juvenile growth rate (chaetigers/day)
7	Growth rate, standard error	µ std e	±	Chakravarti, Leela Jackie		juvenile growth rate
8	Replicates	Repl	#	Chakravarti, Leela Jackie		juvenile growth rate
9	Survival	Survival	%	Chakravarti, Leela Jackie		survival to sexual maturity
10	Survival rate, standard error	Survival rate std e	±	Chakravarti, Leela Jackie		survival to sexual maturity
11	Replicates	Repl	#	Chakravarti, Leela Jackie		survival to sexual maturity
12	Fecundity	Fecundity	#	Chakravarti, Leela Jackie
13	Fecundity, standard error	Fecundity std e	±	Chakravarti, Leela Jackie
14	Replicates	Repl	#	Chakravarti, Leela Jackie
15	Egg volume	Egg vol	mm³	Chakravarti, Leela Jackie
16	Egg volume, standard error	Egg vol std e	±	Chakravarti, Leela Jackie
17	Replicates	Repl	#	Chakravarti, Leela Jackie
18	Chaetigers	Chaetigers	#	Chakravarti, Leela Jackie		max. female size
19	Chaetigers, standard error	Chaetigers std e	±	Chakravarti, Leela Jackie		max. female size
20	Replicates	Repl	#	Chakravarti, Leela Jackie		max. female size
21	Citrate synthase activity, unit per protein mass	CS/prot	U/mg	Chakravarti, Leela Jackie
22	Citrate synthase activity, standard error	CS act std e	±	Chakravarti, Leela Jackie
23	Replicates	Repl	#	Chakravarti, Leela Jackie
24	Electron transport system activity, per protein	ETS act/protein	U/mg	Chakravarti, Leela Jackie
25	Electron transport system activity, standard error	ETS act std e	±	Chakravarti, Leela Jackie
26	Replicates	Repl	#	Chakravarti, Leela Jackie
27	Ratio	Ratio		Chakravarti, Leela Jackie		CS:ETS activity
28	Ratio, standard error	Ratio std e	±	Chakravarti, Leela Jackie		CS:ETS activity
29	Replicates	Repl	#	Chakravarti, Leela Jackie		CS:ETS activity
30	Reactive oxygen species production	ROS prod		Chakravarti, Leela Jackie
31	Reactive oxygen species production, standard error	ROS prod std e	±	Chakravarti, Leela Jackie
32	Replicates	Repl	#	Chakravarti, Leela Jackie
33	pH	pH		Chakravarti, Leela Jackie	Potentiometric	NBS scale, parental environment
34	pH, standard deviation	pH std dev	±	Chakravarti, Leela Jackie	Potentiometric	NBS scale, parental environment
35	Temperature, water	Temp	°C	Chakravarti, Leela Jackie		parental environment
36	Temperature, water, standard deviation	Temp std dev	±	Chakravarti, Leela Jackie		parental environment
37	Salinity	Sal		Chakravarti, Leela Jackie		parental environment
38	Salinity, standard deviation	Sal std dev	±	Chakravarti, Leela Jackie		parental environment
39	Carbon, inorganic, dissolved	DIC	µmol/kg	Chakravarti, Leela Jackie		parental environment
40	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Chakravarti, Leela Jackie		parental environment
41	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Chakravarti, Leela Jackie	Calculated using CO2SYS	parental environment
42	Partial pressure of carbon dioxide, standard deviation	pCO2 std dev	±	Chakravarti, Leela Jackie	Calculated using CO2SYS	parental environment
43	Bicarbonate ion	[HCO3]-	µmol/kg	Chakravarti, Leela Jackie	Calculated using CO2SYS	parental environment
44	Bicarbonate ion, standard deviation	[HCO3]- std dev	±	Chakravarti, Leela Jackie	Calculated using CO2SYS	parental environment
45	Carbonate ion	[CO3]2-	µmol/kg	Chakravarti, Leela Jackie	Calculated using CO2SYS	parental environment
46	Carbonate ion, standard deviation	[CO3]2- std dev	±	Chakravarti, Leela Jackie	Calculated using CO2SYS	parental environment
47	Calcite saturation state	Omega Cal		Chakravarti, Leela Jackie	Calculated using CO2SYS	parental environment
48	Calcite saturation state, standard deviation	Omega Cal std dev	±	Chakravarti, Leela Jackie	Calculated using CO2SYS	parental environment
49	Aragonite saturation state	Omega Arg		Chakravarti, Leela Jackie	Calculated using CO2SYS	parental environment
50	Aragonite saturation state, standard deviation	Omega Arg std dev	±	Chakravarti, Leela Jackie	Calculated using CO2SYS	parental environment
51	pH	pH		Chakravarti, Leela Jackie	Potentiometric	NBS scale, offspring evironment
52	pH, standard deviation	pH std dev	±	Chakravarti, Leela Jackie	Potentiometric	NBS scale, offspring evironment
53	Temperature, water	Temp	°C	Chakravarti, Leela Jackie		offspring evironment
54	Temperature, water, standard deviation	Temp std dev	±	Chakravarti, Leela Jackie		offspring evironment
55	Salinity	Sal		Chakravarti, Leela Jackie		offspring evironment
56	Salinity, standard deviation	Sal std dev	±	Chakravarti, Leela Jackie		offspring evironment
57	Carbon, inorganic, dissolved	DIC	µmol/kg	Chakravarti, Leela Jackie		offspring evironment
58	Carbon, inorganic, dissolved, standard deviation	DIC std dev	±	Chakravarti, Leela Jackie		offspring evironment
59	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Chakravarti, Leela Jackie	Calculated using CO2SYS	offspring evironment
60	Partial pressure of carbon dioxide, standard deviation	pCO2 std dev	±	Chakravarti, Leela Jackie	Calculated using CO2SYS	offspring evironment
61	Bicarbonate ion	[HCO3]-	µmol/kg	Chakravarti, Leela Jackie	Calculated using CO2SYS	offspring evironment
62	Bicarbonate ion, standard deviation	[HCO3]- std dev	±	Chakravarti, Leela Jackie	Calculated using CO2SYS	offspring evironment
63	Carbonate ion	[CO3]2-	µmol/kg	Chakravarti, Leela Jackie	Calculated using CO2SYS	offspring evironment
64	Carbonate ion, standard deviation	[CO3]2- std dev	±	Chakravarti, Leela Jackie	Calculated using CO2SYS	offspring evironment
65	Calcite saturation state	Omega Cal		Chakravarti, Leela Jackie	Calculated using CO2SYS	offspring evironment
66	Calcite saturation state, standard deviation	Omega Cal std dev	±	Chakravarti, Leela Jackie	Calculated using CO2SYS	offspring evironment
67	Aragonite saturation state	Omega Arg		Chakravarti, Leela Jackie	Calculated using CO2SYS	offspring evironment
68	Aragonite saturation state, standard deviation	Omega Arg std dev	±	Chakravarti, Leela Jackie	Calculated using CO2SYS	offspring evironment
69	Carbonate system computation flag	CSC flag		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)
70	pH	pH		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	total scale,parental environment
71	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	parental environment
72	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	parental environment
73	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	parental environment
74	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	parental environment
75	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	parental environment
76	Alkalinity, total	AT	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	parental environment
77	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	parental environment
78	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	parental environment
79	pH	pH		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	total scale,offspring evironment
80	Carbon dioxide	CO2	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	offspring evironment
81	Fugacity of carbon dioxide (water) at sea surface temperature (wet air)	fCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	offspring evironment
82	Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)	pCO2water_SST_wet	µatm	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	offspring evironment
83	Bicarbonate ion	[HCO3]-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	offspring evironment
84	Carbonate ion	[CO3]2-	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	offspring evironment
85	Alkalinity, total	AT	µmol/kg	Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	offspring evironment
86	Aragonite saturation state	Omega Arg		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	offspring evironment
87	Calcite saturation state	Omega Cal		Yang, Yan	Calculated using seacarb after Nisumaa et al. (2010)	offspring evironment

License:

Creative Commons Attribution 3.0 Unported (CC-BY-3.0)

Status:

Curation Level: Enhanced curation (CurationLevelC)

Size:

609 data points

Data

Download dataset as tab-delimited text — use the following character encoding:

1 Type (study)	2 Species	3 Reg spec no	4 URL ref (WoRMS Aphia ID)	5 Treat	6 µ [#/day] (juvenile growth rate (chaetig...)	7 µ std e [±] (juvenile growth rate)	8 Repl [#] (juvenile growth rate)	9 Survival [%] (survival to sexual maturity)	10 Survival rate std e [±] (survival to sexual maturity)	11 Repl [#] (survival to sexual maturity)	12 Fecundity [#]	13 Fecundity std e [±]	14 Repl [#]	15 Egg vol [mm³]	16 Egg vol std e [±]	17 Repl [#]	18 Chaetigers [#] (max. female size)	19 Chaetigers std e [±] (max. female size)	20 Repl [#] (max. female size)	21 CS/prot [U/mg]	22 CS act std e [±]	23 Repl [#]	24 ETS act/protein [U/mg]	25 ETS act std e [±]	26 Repl [#]	27 Ratio (CS:ETS activity)	28 Ratio std e [±] (CS:ETS activity)	29 Repl [#] (CS:ETS activity)	30 ROS prod	31 ROS prod std e [±]	32 Repl [#]	33 pH (NBS scale, parental environme...)	34 pH std dev [±] (NBS scale, parental environme...)	35 Temp [°C] (parental environment)	36 Temp std dev [±] (parental environment)	37 Sal (parental environment)	38 Sal std dev [±] (parental environment)	39 DIC [µmol/kg] (parental environment)	40 DIC std dev [±] (parental environment)	41 pCO2water_SST_wet [µatm] (parental environment, Calcula...)	42 pCO2 std dev [±] (parental environment, Calcula...)	43 [HCO3]- [µmol/kg] (parental environment, Calcula...)	44 [HCO3]- std dev [±] (parental environment, Calcula...)	45 [CO3]2- [µmol/kg] (parental environment, Calcula...)	46 [CO3]2- std dev [±] (parental environment, Calcula...)	47 Omega Cal (parental environment, Calcula...)	48 Omega Cal std dev [±] (parental environment, Calcula...)	49 Omega Arg (parental environment, Calcula...)	50 Omega Arg std dev [±] (parental environment, Calcula...)	51 pH (NBS scale, offspring evironme...)	52 pH std dev [±] (NBS scale, offspring evironme...)	53 Temp [°C] (offspring evironment)	54 Temp std dev [±] (offspring evironment)	55 Sal (offspring evironment)	56 Sal std dev [±] (offspring evironment)	57 DIC [µmol/kg] (offspring evironment)	58 DIC std dev [±] (offspring evironment)	59 pCO2water_SST_wet [µatm] (offspring evironment, Calcula...)	60 pCO2 std dev [±] (offspring evironment, Calcula...)	61 [HCO3]- [µmol/kg] (offspring evironment, Calcula...)	62 [HCO3]- std dev [±] (offspring evironment, Calcula...)	63 [CO3]2- [µmol/kg] (offspring evironment, Calcula...)	64 [CO3]2- std dev [±] (offspring evironment, Calcula...)	65 Omega Cal (offspring evironment, Calcula...)	66 Omega Cal std dev [±] (offspring evironment, Calcula...)	67 Omega Arg (offspring evironment, Calcula...)	68 Omega Arg std dev [±] (offspring evironment, Calcula...)	69 CSC flag (Calculated using seacarb afte...)	70 pH (total scale,parental environm...)	71 CO2 [µmol/kg] (parental environment, Calcula...)	72 fCO2water_SST_wet [µatm] (parental environment, Calcula...)	73 pCO2water_SST_wet [µatm] (parental environment, Calcula...)	74 [HCO3]- [µmol/kg] (parental environment, Calcula...)	75 [CO3]2- [µmol/kg] (parental environment, Calcula...)	76 AT [µmol/kg] (parental environment, Calcula...)	77 Omega Arg (parental environment, Calcula...)	78 Omega Cal (parental environment, Calcula...)	79 pH (total scale,offspring evironm...)	80 CO2 [µmol/kg] (offspring evironment, Calcula...)	81 fCO2water_SST_wet [µatm] (offspring evironment, Calcula...)	82 pCO2water_SST_wet [µatm] (offspring evironment, Calcula...)	83 [HCO3]- [µmol/kg] (offspring evironment, Calcula...)	84 [CO3]2- [µmol/kg] (offspring evironment, Calcula...)	85 AT [µmol/kg] (offspring evironment, Calcula...)	86 Omega Arg (offspring evironment, Calcula...)	87 Omega Cal (offspring evironment, Calcula...)
laboratory	Ophryotrocha labronica (annelid)	130027	marinespecies.org	Parental environment was control conditions, offspring evironment was control conditions	1.43	0.02	72	68.73	4.13	12	427.33	29.89	12	0.00062	0.00001	120	19.67	0.22	12	0.025	0.003	7	0.42	0.04	6	0.57	0.08	6	0.29	0.05	9	8.05	0.12	27.05	1.40	34.56	1.14	3302.70	690.08	386.13	126.64	3059.99	621.72	218.49	83.82	5.24	2.01	3.09	1.16	8.05	0.12	27.05	1.40	34.56	1.14	3302.70	690.08	386.13	126.64	3059.99	621.72	218.49	83.82	5.24	2.01	3.09	1.16	27	7.91	25.15	929.73	932.64	2997.63	279.92	3635.79	4.50	6.79	7.91	25.15	929.73	932.64	2997.63	279.92	3635.79	4.50	6.79
laboratory	Ophryotrocha labronica (annelid)	130027	marinespecies.org	Parental environment was control conditions, offspring evironment was ocean warming conditions	1.58	0.04	72	68.73	4.60	12	272.58	21.54	12	0.00054	0.00001	120	18.75	0.55	12	0.028	0.002	11	0.50	0.05	6	0.64	0.12	6	0.53	0.14	9	8.05	0.12	27.05	1.40	34.56	1.14	3302.70	690.08	386.13	126.64	3059.99	621.72	218.49	83.82	5.24	2.01	3.09	1.16	8.04	0.13	29.91	1.41	34.69	1.11	2903.28	333.11	402.15	173.90	2903.26	333.11	193.60	25.80	4.65	1.29	2.92	0.81	27	7.91	25.15	929.73	932.64	2997.63	279.92	3635.79	4.50	6.79	7.89	21.70	858.93	861.52	2620.11	261.47	3225.24	4.27	6.37
laboratory	Ophryotrocha labronica (annelid)	130027	marinespecies.org	Parental environment was control conditions, offspring evironment was ocean acidification conditions	1.41	0.02	72	78.48	4.30	12	412.75	44.95	12	0.00055	0.00001	80	19.25	0.22	12	0.028	0.002	8	0.37	0.03	9	0.88	0.19	8	0.46	0.16	7	8.05	0.12	27.05	1.40	34.56	1.14	3302.70	690.08	386.13	126.64	3059.99	621.72	218.49	83.82	5.24	2.01	3.09	1.16	7.61	0.12	26.92	1.40	35.09	1.13	3493.54	588.85	1248.64	391.11	3336.00	588.85	79.56	19.54	1.90	0.47	1.20	0.29	27	7.91	25.15	929.73	932.64	2997.63	279.92	3635.79	4.50	6.79	7.47	76.05	2810.58	2819.39	3304.39	113.10	3562.92	1.81	2.73
laboratory	Ophryotrocha labronica (annelid)	130027	marinespecies.org	Parental environment was control conditions, offspring evironment was ocean warming and acidification conditions	1.46	0.04	72	73.92	6.12	12	332.25	26.58	12	0.00062	0.00001	110	18.83	0.41	12	0.034	0.005	7	0.45	0.04	8	0.71	0.12	7	1.91	0.83	9	8.05	0.12	27.05	1.40	34.56	1.14	3302.70	690.08	386.13	126.64	3059.99	621.72	218.49	83.82	5.24	2.01	3.09	1.16	7.60	0.13	29.84	1.41	34.67	1.09	3139.11	584.55	1222.94	322.18	3139.11	584.55	71.57	46.32	1.72	0.62	1.08	0.39	27	7.91	25.15	929.73	932.64	2997.63	279.92	3635.79	4.50	6.79	7.45	67.64	2672.83	2680.92	2964.28	107.20	3211.97	1.75	2.61
laboratory	Ophryotrocha labronica (annelid)	130027	marinespecies.org	Parental environment was ocean warming conditions, offspring evironment was ocean warming conditions	1.52	0.03	69	56.65	6.06	12	389.83	40.37	12	0.00063	0.00001	100	20.17	0.44	12	0.042	0.005	9	0.81	0.07	8	0.51	0.07	8	0.80	0.27	10	8.04	0.13	29.91	1.41	34.69	1.11	2903.28	333.11	402.15	173.90	2903.26	333.11	193.60	25.80	4.65	1.29	2.92	0.81	8.04	0.13	29.91	1.41	34.69	1.11	2903.28	333.11	402.15	173.90	2903.26	333.11	193.60	25.80	4.65	1.29	2.92	0.81	27	7.89	21.70	858.93	861.52	2620.11	261.47	3225.24	4.27	6.37	7.89	21.70	858.93	861.52	2620.11	261.47	3225.24	4.27	6.37
laboratory	Ophryotrocha labronica (annelid)	130027	marinespecies.org	Parental environment was ocean acidification conditions, offspring evironment was ocean acidification condiitons	1.49	0.02	72	67.47	4.74	12	431.67	32.79	12	0.00053	0.00001	100	19.17	0.30	12	0.032	0.003	10	0.49	0.07	9	0.77	0.16	9	0.22	0.04	8	7.61	0.12	26.92	1.40	35.09	1.13	3493.54	588.85	1248.64	391.11	3336.00	588.85	79.56	19.54	1.90	0.47	1.20	0.29	7.61	0.12	26.92	1.40	35.09	1.13	3493.54	588.85	1248.64	391.11	3336.00	588.85	79.56	19.54	1.90	0.47	1.20	0.29	27	7.47	76.05	2810.58	2819.39	3304.39	113.10	3562.92	1.81	2.73	7.47	76.05	2810.58	2819.39	3304.39	113.10	3562.92	1.81	2.73
laboratory	Ophryotrocha labronica (annelid)	130027	marinespecies.org	Parental environment was ocean warming and acidification conditions, offspring evironment was ocean warming and acidification conditions	1.52	0.02	72	67.08	3.98	12	339.27	28.23	12	0.00056	0.00001	80	19.33	0.28	12	0.042	0.005	9	0.58	0.06	6	0.83	0.18	6	0.39	0.06	10	7.60	0.13	29.84	1.41	34.67	1.09	3139.11	584.55	1222.94	322.18	3139.11	584.55	71.57	46.32	1.72	0.62	1.08	0.39	7.60	0.13	29.84	1.41	34.67	1.09	3139.11	584.55	1222.94	322.18	3139.11	584.55	71.57	46.32	1.72	0.62	1.08	0.39	27	7.45	67.64	2672.83	2680.92	2964.28	107.20	3211.97	1.75	2.61	7.45	67.64	2672.83	2680.92	2964.28	107.20	3211.97	1.75	2.61