Vuillemin, Aurèle; Friese, André; Alawi, Mashal; Henny, Cynthia; Nomosatryo, Sulung; Wagner, Dirk; Crowe, Sean Andrew; Kallmeyer, Jens (2016): Band number and Shannon index of extra- and intracellular microbial DNA in ferruginous sediment, Lake Towuti, Indonesia [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.861433, In supplement to: Vuillemin, A et al. (2016): Geomicrobiological features of ferruginous sediments from Lake Towuti, Indonesia. Frontiers in Microbiology, 7(1007), 1-16, https://doi.org/10.3389/fmicb.2016.01007
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Project(s):
Coverage:
Latitude: -2.700000 * Longitude: 121.500000
Minimum DEPTH, sediment/rock: 0.005 m * Maximum DEPTH, sediment/rock: 0.325 m
Event(s):
Parameter(s):
| # | Name | Short Name | Unit | Principal Investigator | Method/Device | Comment |
|---|---|---|---|---|---|---|
| 1 | Site | Site | Vuillemin, Aurèle | |||
| 2 | Depth, bathymetric | Bathy depth | m | Vuillemin, Aurèle | Lake water depth at sampling site | |
| 3 | DEPTH, sediment/rock | Depth sed | m | Vuillemin, Aurèle | Geocode | |
| 4 | Number | n | # | Vuillemin, Aurèle | of bands, eDNA Bacteria | |
| 5 | Number | n | # | Vuillemin, Aurèle | of bands, iDNA Bacteria | |
| 6 | Shannon Diversity Index | H' | Vuillemin, Aurèle | eDNA Bacteria | ||
| 7 | Shannon Diversity Index | H' | Vuillemin, Aurèle | iDNA Bacteria | ||
| 8 | Number | n | # | Vuillemin, Aurèle | of bands, eDNA Archaea | |
| 9 | Number | n | # | Vuillemin, Aurèle | of bands, iDNA Archaea | |
| 10 | Shannon Diversity Index | H' | Vuillemin, Aurèle | eDNA Archaea | ||
| 11 | Shannon Diversity Index | H' | Vuillemin, Aurèle | iDNA Archaea |
License:
Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported (CC-BY-NC-SA-3.0)
Size:
270 data points
Data
| 1 Site | 2 Bathy depth [m] (Lake water depth at sampling ...) | 3 Depth sed [m] | 4 n [#] (of bands, eDNA Bacteria) | 5 n [#] (of bands, iDNA Bacteria) | 6 H' (eDNA Bacteria) | 7 H' (iDNA Bacteria) | 8 n [#] (of bands, eDNA Archaea) | 9 n [#] (of bands, iDNA Archaea) | 10 H' (eDNA Archaea) | 11 H' (iDNA Archaea) |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 153 | 0.015 | 29 | 32 | 1.442 | 1.479 | 11 | 9 | 1.028 | 0.929 |
| 1 | 153 | 0.045 | 23 | 29 | 1.331 | 1.442 | 16 | 10 | 1.194 | 0.984 |
| 1 | 153 | 0.075 | 23 | 30 | 1.323 | 1.456 | 8 | 6 | 0.886 | 0.751 |
| 1 | 153 | 0.110 | 19 | 16 | 1.233 | 1.201 | 9 | 8 | 0.937 | 0.893 |
| 1 | 153 | 0.150 | 12 | 25 | 1.037 | 1.377 | 16 | 7 | 1.186 | 0.830 |
| 1 | 153 | 0.190 | 11 | 23 | 1.018 | 1.337 | 6 | 5 | 0.765 | 0.669 |
| 1 | 153 | 0.225 | 9 | 23 | 0.929 | 1.339 | 9 | 4 | 0.945 | 0.595 |
| 1 | 153 | 0.275 | 12 | 23 | 1.044 | 1.312 | 9 | 5 | 0.944 | 0.697 |
| 1 | 153 | 0.325 | 10 | 19 | 0.994 | 1.262 | 8 | 4 | 0.886 | 0.584 |
| 2 | 200 | 0.015 | 28 | 30 | 1.436 | 1.453 | 10 | 19 | 0.976 | 1.248 |
| 2 | 200 | 0.045 | 25 | 32 | 1.380 | 1.485 | 13 | 14 | 1.096 | 1.123 |
| 2 | 200 | 0.075 | 21 | 24 | 1.291 | 1.369 | 7 | 9 | 0.836 | 0.862 |
| 2 | 200 | 0.110 | 18 | 22 | 1.214 | 1.333 | 12 | 10 | 1.043 | 0.920 |
| 2 | 200 | 0.150 | 19 | 22 | 1.249 | 1.328 | 7 | 9 | 0.807 | 0.869 |
| 2 | 200 | 0.190 | 21 | 11 | 1.303 | 1.023 | 4 | 11 | 0.501 | 0.985 |
| 2 | 200 | 0.225 | 12 | 11 | 1.064 | 1.027 | 4 | 9 | 0.527 | 0.947 |
| 2 | 200 | 0.275 | 14 | 10 | 1.128 | 0.988 | 4 | 7 | 0.534 | 0.759 |
| 2 | 200 | 0.325 | 9 | 14 | 0.926 | 1.131 | 5 | 5 | 0.646 | 0.635 |
| 3 | 60 | 0.005 | 22 | 23 | 1.324 | 1.365 | 21 | 16 | 1.302 | 1.174 |
| 3 | 60 | 0.015 | 20 | 27 | 1.303 | 1.413 | 17 | 17 | 1.215 | 1.193 |
| 3 | 60 | 0.055 | 20 | 30 | 1.350 | 1.444 | 15 | 11 | 1.150 | 1.020 |
| 3 | 60 | 0.075 | 17 | 32 | 1.217 | 1.551 | 16 | 13 | 1.171 | 1.098 |
| 3 | 60 | 0.110 | 16 | 31 | 1.214 | 1.480 | 7 | 11 | 0.784 | 1.030 |
| 3 | 60 | 0.150 | 12 | 21 | 1.094 | 1.337 | 5 | 7 | 0.617 | 0.842 |
| 3 | 60 | 0.190 | 8 | 21 | 0.970 | 1.382 | 4 | 7 | 0.506 | 0.843 |
| 3 | 60 | 0.225 | 7 | 22 | 0.893 | 1.324 | 4 | 7 | 0.493 | 0.843 |
| 3 | 60 | 0.275 | 6 | 22 | 0.969 | 1.357 | 4 | 5 | 0.506 | 0.697 |