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Yuan, Xiutang; Shao, Senlin; Yang, Xiaolong; Yang, Dazuo; Xu, Qinzeng; Zong, Humin; Liu, Shilin (2016): Bioenergetic trade-offs in the sea cucumber Apostichopus japonicus (Echinodermata: Holothuroidea) in response to CO2-driven ocean acidification [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.861382, Supplement to: Yuan, X et al. (2016): Bioenergetic trade-offs in the sea cucumber Apostichopus japonicus (Echinodermata: Holothuroidea) in response to CO2-driven ocean acidification. Environmental Science and Pollution Research, 23(9), 8453-8461, https://doi.org/10.1007/s11356-016-6071-0

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Abstract:
Ocean acidification (OA) caused by excessive CO2 is a potential ecological threat to marine organisms. The impacts of OA on echinoderms are well-documented, but there has been a strong bias towards sea urchins, and limited information is available on sea cucumbers. This work examined the effect of medium-term (60 days) exposure to three pH levels (pH 8.06, 7.72, and 7.41, covering present and future pH variability) on the bioenergetic responses of the sea cucumber, Apostichopus japonicus, an ecologically and economically important holothurian in Asian coasts. Results showed that the measured specific growth rate linearly decreased with decreased pH, leading to a 0.42 %/day decrease at pH 7.41 compared with that at pH 8.06. The impacts of pH on physiological energetics were variable: measured energy consumption and defecation rates linearly decreased with decreased pH, whereas maintenance energy in calculated respiration and excretion were not significantly affected. No shift in energy allocation pattern was observed in A. japonicus upon exposure to pH 7.72 compared with pH 8.06. However, a significant shift in energy budget occurred upon exposure to pH 7.41, leading to decreased energy intake and increased percentage of energy that was lost in feces, thereby resulting in a significantly lowered allocation into somatic growth. These findings indicate that adult A. japonicus is resilient to the OA scenario at the end of the twenty-first century, but further acidification may negatively influence the grazing capability and growth, thereby influencing its ecological functioning as an "ecosystem engineer" and potentially harming its culture output.
Keyword(s):
Animalia; Apostichopus japonicus; Benthic animals; Benthos; Coast and continental shelf; Containers and aquaria (20-1000 L or < 1 m**2); Echinodermata; Growth/Morphology; Laboratory experiment; North Pacific; Other metabolic rates; Respiration; Single species; Temperate
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse (2015): seacarb: seawater carbonate chemistry with R. R package version 3.0.8. https://cran.r-project.org/package=seacarb
Coverage:
Latitude: 38.874950 * Longitude: 121.554020
Date/Time Start: 2013-10-01T00:00:00 * Date/Time End: 2013-10-30T00:00:00
Event(s):
Dalian_OA * Latitude: 38.874950 * Longitude: 121.554020 * Date/Time Start: 2013-10-01T00:00:00 * Date/Time End: 2013-10-30T00:00:00 * Method/Device: Experiment (EXP)
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2016-06-06.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
TypeTypeYuan, Xiutangstudy
SpeciesSpeciesYuan, Xiutang
Registration number of speciesReg spec noYuan, Xiutang
Uniform resource locator/link to referenceURL refYuan, XiutangWoRMS Aphia ID
pHpHYuan, XiutangPotentiometricNBS scale
Energy budgetE budgJ/g/dayYuan, Xiutangenergy consumed in food
Energy budgetE budgJ/g/dayYuan, Xiutangenergy discharged in feces
Energy budgetE budgJ/g/dayYuan, Xiutangenergy deposited into growth
Energy budgetE budgJ/g/dayYuan, Xiutangenergy lost in excretion
10 Energy budgetE budgJ/g/dayYuan, Xiutangenergy lost for respiration
11 RatioRatioYuan, Xiutangenergy discharged in feces/energy consumed in food
12 RatioRatioYuan, Xiutangenergy deposited into growth/energy consumed in food
13 RatioRatioYuan, Xiutangenergy lost in excretion/energy consumed in food
14 RatioRatioYuan, Xiutangenergy lost for respiration/energy consumed in food
15 Growth rateµ%/dayYuan, Xiutang
16 SalinitySalYuan, Xiutang
17 Salinity, standard deviationSal std dev±Yuan, Xiutang
18 Temperature, waterTemp°CYuan, Xiutang
19 Temperature, water, standard deviationTemp std dev±Yuan, Xiutang
20 pHpHYuan, XiutangPotentiometricaverage, NBS scale
21 pH, standard deviationpH std dev±Yuan, XiutangPotentiometricNBS scale
22 Alkalinity, totalATµmol/kgYuan, XiutangPotentiometric titration
23 Alkalinity, total, standard deviationAT std dev±Yuan, XiutangPotentiometric titration
24 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYuan, XiutangCalculated using CO2SYS
25 Partial pressure of carbon dioxide, standard deviationpCO2 std dev±Yuan, XiutangCalculated using CO2SYS
26 Carbon, inorganic, dissolvedDICµmol/kgYuan, XiutangCalculated using CO2SYS
27 Carbon, inorganic, dissolved, standard deviationDIC std dev±Yuan, XiutangCalculated using CO2SYS
28 Calcite saturation stateOmega CalYuan, XiutangCalculated using CO2SYS
29 Calcite saturation state, standard deviationOmega Cal std dev±Yuan, XiutangCalculated using CO2SYS
30 Aragonite saturation stateOmega ArgYuan, XiutangCalculated using CO2SYS
31 Aragonite saturation state, standard deviationOmega Arg std dev±Yuan, XiutangCalculated using CO2SYS
32 Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
33 pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
34 Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
35 Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
36 Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
37 Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
38 Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39 Carbon, inorganic, dissolvedDICµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
40 Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41 Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
492 data points

Data

Download dataset as tab-delimited text — use the following character encoding:


Type
(study)

Species

Reg spec no

URL ref
(WoRMS Aphia ID)

pH
(NBS scale, Potentiometric)

E budg [J/g/day]
(energy consumed in food)

E budg [J/g/day]
(energy discharged in feces)

E budg [J/g/day]
(energy deposited into growth)

E budg [J/g/day]
(energy lost in excretion)
10 
E budg [J/g/day]
(energy lost for respiration)
11 
Ratio
(energy discharged in feces/en...)
12 
Ratio
(energy deposited into growth/...)
13 
Ratio
(energy lost in excretion/ener...)
14 
Ratio
(energy lost for respiration/e...)
15 
µ [%/day]
16 
Sal
17 
Sal std dev [±]
18 
Temp [°C]
19 
Temp std dev [±]
20 
pH
(average, NBS scale, Potentiom...)
21 
pH std dev [±]
(NBS scale, Potentiometric)
22 
AT [µmol/kg]
(Potentiometric titration)
23 
AT std dev [±]
(Potentiometric titration)
24 
pCO2water_SST_wet [µatm]
(Calculated using CO2SYS)
25 
pCO2 std dev [±]
(Calculated using CO2SYS)
26 
DIC [µmol/kg]
(Calculated using CO2SYS)
27 
DIC std dev [±]
(Calculated using CO2SYS)
28 
Omega Cal
(Calculated using CO2SYS)
29 
Omega Cal std dev [±]
(Calculated using CO2SYS)
30 
Omega Arg
(Calculated using CO2SYS)
31 
Omega Arg std dev [±]
(Calculated using CO2SYS)
32 
CSC flag
(Calculated using seacarb afte...)
33 
pH
(total scale, Calculated using...)
34 
CO2 [µmol/kg]
(Calculated using seacarb afte...)
35 
fCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
36 
pCO2water_SST_wet [µatm]
(Calculated using seacarb afte...)
37 
[HCO3]- [µmol/kg]
(Calculated using seacarb afte...)
38 
[CO3]2- [µmol/kg]
(Calculated using seacarb afte...)
39 
DIC [µmol/kg]
(Calculated using seacarb afte...)
40 
Omega Arg
(Calculated using seacarb afte...)
41 
Omega Cal
(Calculated using seacarb afte...)
laboratoryApostichopus japonicus (Apostichopus japonicus)241776marinespecies.org8.0793751654.346064852.849501571.5663998851.99009531677.940066951.552061584.3259630773.14263723040.979338110.42791247730.40.420.10.18.060.03251237626462327373.660.182.350.12267.9320.46616.82618.922156.39149.062325.912.373.69
laboratoryApostichopus japonicus (Apostichopus japonicus)241776marinespecies.org8.0650001786.437550938.833484291.5815589859.31159436696.710912852.553389515.1264909303.32010454839.000015010.70927182530.40.420.10.18.060.03251237626462327373.660.182.350.12267.9320.46616.82618.922156.39149.062325.912.373.69
laboratoryApostichopus japonicus (Apostichopus japonicus)241776marinespecies.org8.0550001599.494333847.293616887.4416626248.07069061616.688362952.972592615.4668316623.00536798538.555207740.68138835430.40.420.10.18.060.03251237626462327373.660.182.350.12267.9320.46616.82618.922156.39149.062325.912.373.69
laboratoryApostichopus japonicus (Apostichopus japonicus)241776marinespecies.org8.0556251340.466097720.701606868.8888263836.75068907514.124974753.765000735.1391696172.74163510438.354194550.53594450930.40.420.10.18.060.03251237626462327373.660.182.350.12267.9320.46616.82618.922156.39149.062325.912.373.69
laboratoryApostichopus japonicus (Apostichopus japonicus)241776marinespecies.org7.7087501693.045516844.672760285.4741236757.09334422705.805288049.890729595.0485425743.37222736741.688500470.65756754830.60.520.00.17.720.022538511511882486541.810.061.160.04267.5949.521490.981496.062361.5973.882484.991.171.82
laboratoryApostichopus japonicus (Apostichopus japonicus)241776marinespecies.org7.7275001595.631831780.972638954.2279012262.38072446698.050566248.944413363.3985221513.90946854243.747595950.32169751230.60.520.00.17.720.022538511511882486541.810.061.160.04267.5949.521490.981496.062361.5973.882484.991.171.82
laboratoryApostichopus japonicus (Apostichopus japonicus)241776marinespecies.org7.7243751710.622134950.528947225.7322547165.12283750669.238095055.566271951.5042629343.80696801439.122497110.14238603730.60.520.00.17.720.022538511511882486541.810.061.160.04267.5949.521490.981496.062361.5973.882484.991.171.82
laboratoryApostichopus japonicus (Apostichopus japonicus)241776marinespecies.org7.7137501514.663112745.809710464.3364186546.22546581658.291516849.239313004.2475728203.05186450043.461249680.39550303130.60.520.00.17.720.022538511511882486541.810.061.160.04267.5949.521490.981496.062361.5973.882484.991.171.82
laboratoryApostichopus japonicus (Apostichopus japonicus)241776marinespecies.org7.4243751312.597687759.684039958.6479400938.38660191455.879105457.876381114.4680819312.92447581534.731061150.43831466730.70.520.00.27.410.0325556032242422610610.920.070.590.05267.28106.383202.873213.812465.1337.632609.150.600.93
laboratoryApostichopus japonicus (Apostichopus japonicus)241776marinespecies.org7.3750001369.575214699.455477730.7443772141.26848962598.106869451.070979572.2448111573.01323280443.670976470.10301049030.70.520.00.27.410.0325556032242422610610.920.070.590.05267.28106.383202.873213.812465.1337.632609.150.600.93
laboratoryApostichopus japonicus (Apostichopus japonicus)241776marinespecies.org7.4131251089.095579632.713531717.3953533929.50450408409.482189658.095317251.5972292722.70908308337.598370390.03985973630.70.520.00.27.410.0325556032242422610610.920.070.590.05267.28106.383202.873213.812465.1337.632609.150.600.93
laboratoryApostichopus japonicus (Apostichopus japonicus)241776marinespecies.org7.4093751185.150263655.029327422.4252554643.03436543464.661314555.269728061.8921866843.63113157739.206953670.07360918330.70.520.00.27.410.0325556032242422610610.920.070.590.05267.28106.383202.873213.812465.1337.632609.150.600.93