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Jessen, Gerdhard L; Lichtschlag, Anna; Struck, Ulrich; Boetius, Antje: Biogeochemical measurements of sediments collected at station MSM15/1_377-1 (microbial mat 4) in the Black Sea during the MSM15/1 cruise in 2010 [dataset]. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.858218 (unpublished dataset), In supplement to: Jessen, GL et al. (2016): Distribution and composition of thiotrophic mats in the hypoxic zone of the Black Sea (150-170m water depth, Crimea margin). https://doi.org/10.3389/fmicb.2016.01011

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Abstract:
Biogeochemical measurements in sediment cores collected with the submersible JAGO (pusch cores) and a TV-MUC in the Black Sea during MSM15/1, Northwest Crimea (HYPOX Project), at water depths between 152-156 m. A series of microbial mats were sampled on the hypoxic region of the Crimean Shelf. Concentrations of organic carbon (Corg) and nitrogen (N) were measured on finely powdered, freeze-dried subsamples of sediment using a using a Fisons NA-1500 elemental analyzer. For organic carbon determination samples were pre-treated with 12.5% HCl to remove carbonates. Chlorophyll a (chl a), phaeopigments (PHAEO) and chloroplastic pigment equivalents (CPE) was measured according to Schubert et al., (2005) and total hydrolyzable amino acids (THAA) and single amino acid: ASP, GLU, SER, HIS, GLY, THR, ARG, ALA, TYR, MET, VAL, PHE, ILE, LEU, LYS following Dauwe et al., 1998.
Further details:
Dauwe, Birgit; Middelburg, Jack J (1998): Amino acids and hexosamines as indicators of organic matter degradation state in North Sea sediments. Limnology and Oceanography, 43(5), 782-798, https://doi.org/10.4319/lo.1998.43.5.0782
Schubert, Carsten J; Niggemann, Jutta; Klockgether, Gabriele; Ferdelman, Timothy G (2005): Chlorin Index: A new parameter for organic matter freshness in sediments. Geochemistry, Geophysics, Geosystems, 6, Q03005, https://doi.org/10.1029/2004GC000837
Funding:
Seventh Framework Programme (FP7), grant/award no. 226213: In situ monitoring of oxygen depletion in hypoxic ecosystems of coastal and open seas and land-locked water bodies
Coverage:
Latitude: 44.625833 * Longitude: 32.916333
Date/Time Start: 2010-04-26T10:34:00 * Date/Time End: 2010-04-26T10:34:00
Minimum DEPTH, sediment/rock: 0.005 m * Maximum DEPTH, sediment/rock: 0.095 m
Event(s):
MSM15/1_377-1 * Latitude: 44.625833 * Longitude: 32.916333 * Date/Time: 2010-04-26T10:34:00 * Elevation: -156.1 m * Location: Black Sea * Campaign: MSM15/1 * Basis: Maria S. Merian * Method/Device: Multicorer with television (TVMUC)
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1Event labelEvent
2Latitude of eventLatitude
3Longitude of eventLongitude
4Date/Time of eventDate/Time
5PositionPositionBoetius, Antje
6Depth, top/minDepth topmBoetius, Antje
7Depth, bottom/maxDepth botmBoetius, Antje
8DEPTH, sediment/rockDepth sedmBoetius, AntjeGeocode
9Carbon, organic, totalTOC%Boetius, AntjeElement analyser, Fisons NA 1500Replicate 1
10Carbon, organic, totalTOC%Boetius, AntjeElement analyser, Fisons NA 1500Replicate 2
11Carbon, organic, totalTOC%Boetius, AntjeElement analyser, Fisons NA 1500Replicate 3
12Carbon, organic, totalTOC%Boetius, AntjeElement analyser, Fisons NA 1500Replicate 4
13Nitrogen, totalTN%Boetius, AntjeElement analyser, Fisons NA 1500Replicate 1
14Nitrogen, totalTN%Boetius, AntjeElement analyser, Fisons NA 1500Replicate 2
15Nitrogen, totalTN%Boetius, AntjeElement analyser, Fisons NA 1500Replicate 3
16Chlorophyll aChl aµg/gBoetius, Antjeafter Schubert et al. (2005)
17Phaeopigments per unit sediment massPhae/sedµg/gBoetius, Antjeafter Schubert et al. (2005)
18Chloroplastic pigment equivalentsCPEµg/gBoetius, Antjeafter Schubert et al. (2005)
19Aspartic acidAspµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
20Aspartic acidAspµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
21Aspartic acidAspµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
22Glutamic acidGluµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
23Glutamic acidGluµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
24Glutamic acidGluµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
25SerineSerµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
26SerineSerµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
27SerineSerµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
28HistidineHisµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
29HistidineHisµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
30HistidineHisµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
31GlycineGlyµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
32GlycineGlyµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
33GlycineGlyµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
34ThreonineThrµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
35ThreonineThrµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
36ThreonineThrµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
37ArginineArgµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
38ArginineArgµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
39ArginineArgµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
40AlanineAlaµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
41AlanineAlaµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
42AlanineAlaµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
43TyrosineTyrµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
44TyrosineTyrµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
45TyrosineTyrµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
46MethionineMetµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
47MethionineMetµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
48MethionineMetµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
49ValineValµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
50ValineValµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
51ValineValµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
52PhenylalaninePheµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
53PhenylalaninePheµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
54PhenylalaninePheµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
55IsoleucineIleµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
56IsoleucineIleµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
57IsoleucineIleµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
58LeucineLeuµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
59LeucineLeuµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
60LeucineLeuµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
61LysineLysµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
62LysineLysµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
63LysineLysµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
64Amino acid, total hydrolysableTHAAµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 1
65Amino acid, total hydrolysableTHAAµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 2
66Amino acid, total hydrolysableTHAAµmol/gBoetius, Antjeafter Dauwe & Middelburg (1998)Replicate 3
Size:
161 data points

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